Oncorhynchus kisutch (coho salmon): 109899245
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Entry
109899245 CDS
T09179
Name
(RefSeq) uncharacterized protein LOC109899245 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
109899245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109899245
Membrane trafficking [BR:
oki04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109899245
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
SH3_9
PH
SH3_2
Motif
Other DBs
NCBI-GeneID:
109899245
NCBI-ProteinID:
XP_031692181
Ensembl:
ENSOKIG00005007613
UniProt:
A0A8C7DAC0
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Position
LG11:74167468..74198706
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AA seq
1312 aa
AA seq
DB search
MRMAGQSDAALSSSDDSLSCRDGSSTDPDLQPRAWPRPLGDLYPTQGHVEIAVPPSLLSG
CGAQVQLVTYDPHNEESRLNRLNTDTWSSRVIGHPEMKPYPSRIMRLFSTQRKCTVPGDS
PGTTRPLSFQGPQSSAGGPQAWPVLSGLAVMGSFKKLRSSVLQGIQNRGTANPDGEYISA
ANQGEYNGMVTTNQSLRLRCGEGYSVSSRVSIGQQMAGMSPYSSENEEEEEVVDKEDGLQ
RNTCFSRSIRRAYGAGRISLLDTGQNGERGEGPGQGVSSNQRPGLGSSSGSEVNLHSEES
VNVLSRLTKSADNLHLKAPFRRKAPSPSPNDSPGTIGSVVANVGPSIQRSASASSVDLRD
RSQSPGRLRSPLGARGHMLKLVGSMTDLTVRRRPNLSPVTCPGSPVTPLSPLSRLHDDYS
RRTPCLPAGDRQRRPSPARTRNVTLVSLEHTPTIHPHLQGRPDHVFSFPTYSEPLATTSS
PLRSSLCEGGRPQEGRGDGWRAQCDSTPLHQGEPCESHSKHQPEVNAEVKTAPKQCIWTR
PDQDQEELEDTSDEQGREALLGGEEAPSPSATGTTLTPRCSLHSPISPILTTSPMATGAT
ETSTSVTPRRRAGRSRPRPISDYAQLVARKYAIPEEEAELQPEERITNGTLCQDFKSNGG
SQDSDSQENYNMNGDLRCRRRRPMSVIGGVDLYSSPGAEGREDRLPSPLSRPPVPSHQVP
SYRAVSARFRPSTFSQSTPIGLDRLGQRKLHRVLSADGGSECCAAVDGDSVSEEEGSFDE
LSDVTTYLQPGVGLSALSQWISQGQAVYAEALWDHVTMEEQELAFKAGDVIRVLEAPHKD
WWWGMGADREAWFPSSFVRVRVNQEEDSGAESVERCALDQENPHTAPRDTHSAEHRHQMR
TNVVKEIMNTERIYIKHLRDICEGYIRQCGKNPGMFTELQLKTIFSNIEDIYKFQRQFLK
DLERKYNTDQPHLSEIGACFLLQGEGFSIYSEYCNTHPAACGELQRLMKLGRYKHFFEAC
RLLQQMIDISIAGFLLTPVQKICKYPLQLGELLKYTPKDHSDYGGVSDAYEAMKNVASLI
NEGKRRLESVDAIAHWQVAILRWEGADVLERSSELIHSGELTRIVCQGNKTQQRSFFLFD
HQLVFCKKDVLRRDLLYYRGRLDMDHTELLEMPDGRDPELGISLKNALWLRNSSTLETLC
YLCCRKPQDRQRWLQAFARERRRVQEDQETGMKISETQRKQAIFNARKSRQGKMKTMGYS
VPPHNQPLHPIHQRHVTVPTSVPQQQVFTLAEPKRKPAHLWYTFTRHTFFRK
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgagaatggcggggcagagcgatgcagccctgtctagcagcgatgactccctctcctgt
cgcgatggctcctccaccgaccctgaccttcaacctcgagcctggccccgacccctcggc
gatctttaccctacccagggtcacgtggagattgcggtgcccccgtccctgctgtctggg
tgtggtgcccaggtacagcttgtgacctatgacccccacaatgaggagagtagactgaac
aggctcaacacggacacctggtccagccgagtgataggccaccctgagatgaagccctac
ccctccaggatcatgaggctcttctctacccagaggaagtgcactgttcctggggacagt
ccgggcacaaccaggcccctctccttccagggccctcaatccagtgccgggggcccgcag
gcttggccagtcctgtcagggcttgccgtcatgggctcctttaagaagctgcgctcctca
gtgctccaaggcattcagaaccgagggacagctaatccggatggggagtacatctcagca
gccaaccagggtgaatataatggaatggtcacaaccaatcagagcttaagactgaggtgt
ggggagggctatagtgtgtccagtagggtgtctattggccagcagatggctgggatgagc
ccttatagttctgaaaatgaagaagaggaggaagtagtagataaggaagatggactgcag
agaaacacatgcttttcaaggagtatccggagagcatatggggcggggcgcatctcactg
ctggacactgggcagaacggggaacgcggggagggtccgggacagggggtttcatccaat
cagaggccaggtttaggctccagttcagggtctgaggtgaacctccattcggaagagagc
gtcaatgtgctgagcagactaaccaagagtgcagacaacctacaccttaaggcccctttc
agacgcaaagccccttctccctctccaaatgactcacctggtaccattggctctgtagtg
gccaatgtgggccccagcatacagagatcagccagtgcctcgtccgtggaccttagggac
cgcagccagagccctggtcgccttagaagtcccctaggggccaggggccacatgttgaag
ctagtgggcagcatgactgacctgaccgtgagacgtaggcctaacctgtcccccgtcact
tgcccaggctcccccgtgactcccctgtcccccctcagccgtctccacgacgactactcc
cgccgtacgccctgccttcccgccggcgaccgtcaacggcggccctcgcccgccagaacg
aggaacgtcactctggtatcactggaacacaccccaaccatccacccccacctccaggga
agaccagaccatgtcttcagtttcccaacctatagtgaacctctcgctacaacctcatct
cccctgaggagcagcctgtgtgaggggggcaggcctcaggagggacggggagacgggtgg
agagctcagtgtgactccactccactccaccagggggagccatgtgagagccacagcaaa
caccagccggaggtcaatgcagaggtcaagacggcaccaaagcagtgcatatggaccaga
ccagaccaagatcaggaggagctggaggacacatcagacgaacagggcagagaggcactg
ttagggggtgaagaggcgccctctccttcagccaccggtaccactctcaccccaagatgt
tccctacattctcccatctcacccatattaaccacatcacccatggcaacaggcgcaacg
gaaacgtccacgtccgtcacccccagacggagggcggggcgatcgaggcctcggccaatc
tctgactacgctcagctggttgccaggaagtacgccatccccgaggaggaggcggagcta
caacctgaggagaggattacaaatggaactctctgtcaggacttcaaaagtaatggaggc
tcgcaggacagtgacagccaagagaactacaatatgaatggagatctccggtgccggaga
agacggcctatgtctgtgattggaggagtggatctgtactcttcacctggcgctgagggg
agagaggaccgcctgccgtctcccctgtcacgcccccctgtcccatcccaccaagtgccc
tcctacagggctgtgtcggccaggttccgcccctccaccttctcccagagcacacccatt
ggactggaccgccttggacaacgcaaactacacagagtcctcagtgcagacggaggctca
gagtgttgtgcagcggtggatggtgacagtgtgagtgaggaggaggggagcttcgatgag
ctcagtgatgtcacaacgtacctgcagcctggggtggggctgtctgctctcagccagtgg
atcagccagggtcaagctgtgtatgcagaggccctgtgggaccatgtgacaatggaggag
caggagctggcgttcaaggcgggggatgtgatccgggtgctggaggcccctcacaaggac
tggtggtggggcatgggggcagacagggaggcctggttcccctccagcttcgtcagggtg
cgtgtgaaccaggaggaggattctggagcggagagtgtagagcgttgtgctctggaccag
gagaacccacacactgccccccgggacacacacagcgctgagcaccgccaccagatgagg
accaacgtggtcaaagagatcatgaacacagaacgcatctacatcaaacacctccgggac
atctgtgagggctatatccgtcagtgtggtaagaacccaggcatgttcactgagctgcag
ctgaagaccatcttcagtaacatcgaggacatctacaagttccagagacagttcctcaaa
gacctggagaggaagtacaacacagaccagcctcacctcagtgagataggagcctgtttc
ctcttacagggggaggggttttccatctactctgagtactgtaacacccaccctgcagcg
tgtggggagctgcagcgcctcatgaagctgggcaggtacaagcacttctttgaggcctgc
cggctgctgcagcagatgattgacatctccatcgccggcttcctgctcacgcccgtccag
aagatctgcaagtaccccctgcagctgggagagctgctcaaatacactcccaaagaccac
agtgactacggtggagtgagtgatgcgtacgaggcgatgaagaacgtggcgagcctcatc
aatgaggggaagaggcgcctggagagtgttgacgccatcgctcactggcaagtggccatc
ctacgctgggagggagcagacgtgttggagcgcagctcggagctgatccactctggagag
ctgacccggatcgtgtgccagggcaacaagacacagcagcgcagcttcttcctgttcgac
caccagctggtgttctgtaagaaggacgtgctgcgccgcgacctgctgtactaccgcggc
cgtctggacatggaccacacggagctgctggagatgcccgacggcagggaccctgagctg
ggcatctcgctgaagaatgccctgtggctccggaacagctccactctggagaccctgtgt
tacctctgctgcagaaagccccaggacagacagcgctggctgcaggcctttgccagggag
agacggagggtacaggaggaccaagagacgggaatgaagatcagtgaaacgcagcgaaaa
caagcaatcttcaatgcgaggaaatcccgacaagggaaaatgaagaccatgggctactct
gtcccaccccacaaccagcccctgcatccaattcaccagcgccacgttaccgtgccaacc
agcgtgcctcagcagcaggtgttcacattggccgagcccaagcgaaagcccgcccatctg
tggtacaccttcacccgacacaccttcttcaggaagtga
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