Oncorhynchus kisutch (coho salmon): 109899272
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Entry
109899272 CDS
T09179
Name
(RefSeq) tripartite motif-containing protein 55 isoform X1
KO
K10654
tripartite motif-containing protein 55
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109899272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109899272
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109899272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_2
zf-B_box
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
Sina_RING
CC_BshC
Zn_ribbon_FGT1_2
Golgin_A5
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
109899272
NCBI-ProteinID:
XP_020349925
Ensembl:
ENSOKIG00005007278
UniProt:
A0A8C7DDY1
LinkDB
All DBs
Position
LG11:complement(73722762..73730572)
Genome browser
AA seq
350 aa
AA seq
DB search
MDNLEKQLICPICLETFTKPVVILPCQHNLCRKCANDIFQASNPYLPTRGGSVTSGGRFR
CPSCRHEVVLDRHGVYGLQRNLLVENIIDMFKQESTSSAKPAAPERTEEQAMCQEHKEEK
INIYCVTHSVPTCSMCKVFGAHQDCEVAPLKSMYQTQKTELTDGIAMMVGNNDRIQGIIS
QLKETCRTIEENGRRQKSQLCEKFDHLYAILEERKRDLSSKVVAEQEEKLNYIRGLTKKY
KEHLERSCKTVETGIQTLEEPEMAVFLQTVKDLLKRTGEASSTSHLEKVEQGYEAMDHYT
VNFWREGRALRSIDFISDDEDEYEEVDGGKAEAEVGGGASTAAPLPSPAP
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggacaatttggagaagcagttgatttgtcccatctgcctggaaacatttaccaaacca
gtggtcattttaccgtgtcaacacaacctgtgtagaaagtgtgccaatgatatctttcag
gcctccaacccatacctcccaaccagaggggggtcagtgacctccggtggccgtttccgg
tgcccgtcctgcaggcacgaggtggttctggaccgccatggggtctacgggctccagagg
aacctgctggtggagaacatcatcgacatgttcaaacaggagtccaccagcagcgccaag
ccagcggccccagagaggacagaggagcaggccatgtgccaagagcacaaggaggagaag
atcaacatctactgtgtgacccacagcgtgcccacctgctccatgtgcaaggtgtttgga
gcccaccaggactgtgaggtggcgccgctcaaaagcatgtaccagacgcagaagacggag
ttgactgacgggatagcgatgatggtggggaacaacgacaggatccagggcatcatcagt
cagttaaaggagacctgccggaccatagaggagaatggcaggaggcagaagtcccagctg
tgtgagaagtttgaccatctgtacgccatcttggaggagaggaagagggacttaagttct
aaggtggtggccgagcaggaagagaagctcaactacattcgtggtctaaccaagaagtac
aaagagcacctggagcggagctgtaagaccgtagagacaggcatacagaccttggaggaa
ccagagatggctgtcttcctacagactgtaaaagacctccttaaaaggactggggaggcg
tcaagtacctcccacctggagaaggtggagcaaggatatgaggcgatggatcactacacc
gttaacttttggagagagggcagggccctgcgtagcattgacttcatctcagatgacgaa
gatgagtatgaggaggtagatgggggaaaggcagaggctgaagtaggaggtggagcctca
acagctgccccactcccatcccccgccccttaa
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integrated database retrieval system
