Oncorhynchus kisutch (coho salmon): 109899320
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Entry
109899320 CDS
T09179
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 4 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109899320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109899320
03036 Chromosome and associated proteins [BR:
oki03036
]
109899320
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
109899320
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
109899320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
MSL3_chromo-like
SAM_PNT
DUF5431
Motif
Other DBs
NCBI-GeneID:
109899320
NCBI-ProteinID:
XP_020350032
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All DBs
Position
LG11:complement(69548880..69680084)
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AA seq
662 aa
AA seq
DB search
MMQAEDRKKRSFSKGVAEEYCLRERPNEDTVKMKNKVTSTQAVRGKKKAWSWDQYLGEKK
VIAAPLRLFTEAQSFPLSRNGFKAGMRLEGIDPLHPSMFCILSVAEVIGYRLRLHIDSYS
ECYDFWVNADSPDIRPAGWCESTGHQLHPPKGYNESEFNWEKYQEACNAEAAPKNLFKSQ
NGTTSTSKFQVGMKLEAVDRKNPCLVCVASVADIVDNHFLVHFDNWDDTYDYWCDASSPH
IHPVGWCQDHGRPLTAPQGHPNPEHFLWEEYLQDNGSTAVPSQAFCMRAPHSFQVNMKLE
AVDRRNPMLVRVATVSDTEDYRVKIRFDGWHEKFDFWVDSDLPDLHPVGWCARTGHPLEP
PLSHAGPSDLKSSVTQGVCPTPGCRGVGHIKGAKYTGHHSAFGCPYSDINMKKEAVLPDR
LGGEKQITFVPVHFVQKTKRLCTANEQEEATPQDTPMETRAMLSGYEEAGRLRGRPPANP
LVKREPREEPATAQGQKLLSLGKRGLPSRLSQSTKYLRVKEEEEEIDLNSMITEHSVESL
QQALHQSVFLSAMSAHPGRDLPLCWEQHCKLLPGVAGVQASRVAHWTAEEVADFIHSLHG
CDEQAKQFKEEQIDGKAFLLLTQRDIVKIMSVKLGPALKIYNSILMFKHAEDNQSAAGNA
NT
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaggcagaggataggaagaaaaggagtttcagcaagggcgtggcggaggaatat
tgtctaagagagcgaccaaacgaggacaccgtaaaaatgaagaacaaagtgacaagcaca
caagcagtgaggggtaagaagaaggcatggtcgtgggatcaatacctgggagagaagaag
gtcatagcagctcccctaagactcttcactgaggctcagtcgttcccccttagcagaaat
ggtttcaaggcggggatgaggctggaggggatcgaccctctgcacccctctatgttctgc
atcctgtccgtggcagaggtgattggttaccgattacgtctccacatcgacagctactca
gaatgctatgacttctgggtaaacgcagactctccggatatcaggccagccggatggtgt
gagtcgacaggacaccagctccacccaccaaaaggctacaatgaaagcgagtttaactgg
gagaaataccaagaggcttgcaatgctgaagctgcaccaaagaatctgtttaaatcccaa
aatggtactacgagcacctctaagtttcaggtgggcatgaaactggaggcagtggacaga
aagaatccatgcctggtgtgtgtggcctcggtggccgacatcgtggacaatcacttcctg
gttcactttgacaactgggacgacacctacgactactggtgtgacgccagcagccctcac
atccacccagtgggctggtgccaggaccacggaagacctctcactgcacctcagggacac
cccaatccagaacatttcctgtgggaggagtacttacaagacaacggttccacggcggtt
ccaagccaggctttctgtatgagagcgcctcacagtttccaggtgaacatgaagctggag
gcggtggacaggaggaaccccatgctggtccgcgtggccaccgtctcagacactgaggac
tacagggtcaagatccgttttgacggctggcatgagaagtttgacttctgggtggactct
gacctgccggaccttcaccctgtgggctggtgtgcccggacaggtcatcccctggaaccc
cccctctcacacgcaggaccttctgaccttaagagctccgtgacccagggagtgtgcccc
actccgggctgcaggggtgtgggccacatcaaaggagccaaatacacaggacaccacagt
gccttcggctgtccctactccgacatcaacatgaagaaggaggccgtgctgcctgaccgg
ctgggcggcgaaaagcagatcacctttgtccctgtgcactttgtccagaagaccaagagg
ctgtgcactgccaacgaacaggaggaagccacaccccaggacactcccatggaaaccagg
gctatgttgtcagggtatgaggaggctggtcgtctgagaggacgacccccagccaacccc
ctggtgaagagagagccaagggaggaaccagccacagctcagggacagaagctcctctct
ctggggaagagaggcctacccagcaggctctcccagtcaacaaaatatctgcgagtcaaa
gaggaggaggaagagattgacttgaatagcatgatcacagagcacagcgtggaaagcctg
cagcaggccctccaccagtcagtgttcctgtcagcaatgtcggcccaccctggccgggac
ctgcccctatgctgggagcagcactgcaagctgctgcctggagtggccggagtacaggcc
agccgtgtggcccactggaccgcggaggaggtggctgacttcatccactctcttcacggc
tgtgatgaacaagccaagcagttcaaagaggagcaaattgacgggaaagccttcttgctg
ctgacccagcgcgacatcgtcaagatcatgagcgtgaaactcggtcctgccctcaagata
tacaactccatcctgatgttcaagcacgctgaggacaaccaatcggcagctggcaacgcc
aacacatga
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