Oncorhynchus kisutch (coho salmon): 109899398
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Entry
109899398 CDS
T09179
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5 isoform X1
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
oki03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109899398
09123 Folding, sorting and degradation
03018 RNA degradation
109899398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109899398
03041 Spliceosome [BR:
oki03041
]
109899398
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109899398
mRNA degradation factors
5'-3' decay
Lsm complex
109899398
Spliceosome [BR:
oki03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
109899398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
109899398
NCBI-ProteinID:
XP_020350200
Ensembl:
ENSOKIG00005011448
LinkDB
All DBs
Position
LG11:complement(65676691..65682095)
Genome browser
AA seq
91 aa
AA seq
DB search
MAATPATNPSQLLPLELVDKCIGSRIHIVMKNDKEIVGTLLGFDDFVNMVLEDVTEFEIT
PEGRRITKLDQILLNGNNITMLIPGGEGPEV
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaccccagctacaaatccatcacagttgctcccacttgagcttgtggacaaa
tgtataggttcccgaatccatatagtcatgaaaaacgacaaagaaattgtcggcacccta
ttgggtttcgatgattttgtcaacatggtgttggaggacgtgacagaatttgaaatcact
ccggagggaagaaggataaccaaactggaccagatcctactcaacggcaacaacatcacc
atgctcatacctggaggcgaagggcctgaagtatga
DBGET
integrated database retrieval system
