Oncorhynchus kisutch (coho salmon): 109899430
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Entry
109899430 CDS
T09179
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1 isoform X1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109899430
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
109899430
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GFIT
Motif
Pfam:
Med1
Motif
Other DBs
NCBI-GeneID:
109899430
NCBI-ProteinID:
XP_020350254
Ensembl:
ENSOKIG00005005237
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Position
LG11:complement(63476609..63487066)
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AA seq
619 aa
AA seq
DB search
MAVVGSKSFISDLHSKYAEKTWNETFKLVRRCMDKSRGDTKPCEPLIRCLKILHEALNVS
SLSAMVSRLEIMAKQRGMGSHLSPTETTCYLTADMFYLEVLLLPGGEVEDVKLAQHGEAP
VSSESLLQLLKSKKFEEFSVKLKGLSSLYNIPGDNETKIKVYTALQFLGKDLQKISHLPR
ALRECNLQVDMILNGRIGYLTAGSEGIPMTIQYYISPSDILLEMSDSERGSIGQLALVTV
GPSDSTHRLQMASVIPQPPQLDAQGLPLFSPLCEVLSEMMPACFQLKLQPPLPMLSSFVE
KLSQITDVAIADADLQWAPFPQLMMTLLGENGGKKTWDGQDAHFLVVSFHHFDTPVFSIQ
PLPGKEIHSYVLPGAAWEEAALRGTLMSTIPFTHPAHVPALLELLRHQCAINTLLASCIT
SLRPSPGPVCDLYCEVLPESGSSLSVTFHLSDSDSLSVLLVNVADSRKLTCSLFAVGSES
MDEYVSRVLKRCMSIPVTMRALNRRLSKRTCGEPLPACSATISTADVSPASPLPMSCEAD
GSLSSGSGLESIGIPTTSSTAAVFSQDAMGTDTTATAAESAFCLSVAEVNTNPTANPYPC
ASVCVYSQWMHNNHLPELI
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggttgggagtaagtccttcatttctgacctgcactcaaaatatgcagaaaag
acatggaatgagacctttaaactggttcgtaggtgtatggacaaatcgagaggtgacacc
aaaccctgtgaaccactgattaggtgtctgaaaatactccatgaagcactgaatgtgtcg
tctttgagcgccatggtatcacggttggagataatggccaaacagagagggatggggtcc
cacctgagccccactgagacaacctgttacctcacagctgacatgttctacctagaggtc
ctactactgcctggcggagaggtggaggatgtgaaattggcccaacatggagaagcccct
gtgtcaagcgagtcacttcttcaactgctaaagtcaaagaagtttgaagaattctcagtg
aaactgaaaggcctttcctccctgtacaacatccctggagacaatgagaccaagatcaag
gtctacacagccctgcagttcttggggaaagatctacagaagatatcccatttgccaaga
gcattaagggagtgcaatcttcaagtggacatgattctcaatggcaggattggctatctt
acggcagggagcgaaggtatcccaatgactatccaatactacatcagcccttctgacatt
ctgttggagatgtccgattcagaaaggggcagtattggccagttggccttggtgacagtg
gggccaagtgactctacacacaggctccagatggcatctgtcatcccacagccacctcag
cttgatgcccagggtctaccattgttcagtcctctctgtgaggtgctctctgaaatgatg
ccagcctgcttccagctcaaactgcagccacccctaccaatgctctcttcctttgttgag
aagctcagccaaattacagatgttgccatagctgatgctgacctgcagtgggcacctttt
ccccagttgatgatgaccttattaggggagaatggtggcaagaaaacatgggatggccaa
gatgcccactttctagtggtttcattccatcattttgacacaccggtcttctccatccag
cccctcccaggtaaagagatacatagctatgtgctgccgggggctgcatgggaagaagct
gctctgagggggacgctgatgagtaccattccctttacccaccccgcccatgtccctgcc
ctactggagctgctccgccaccagtgtgcaattaacactctactggccagctgcattacc
tctctcaggcctagcccaggtccagtgtgtgacctatactgcgaagtcctccctgagtca
ggttctagcctctctgtgacctttcacctatctgacagtgactctctatctgttttgctg
gtgaatgtggcagactcccggaagctcacctgcagtctgtttgcagtggggtcagaatcc
atggatgaatatgtctccagagtcctaaagagatgtatgtctattcctgtgaccatgcgt
gccttgaatcggaggctgtccaagaggacctgtggagaacctctacctgcatgctctgcc
accatatccactgcagatgtcagccctgcttctcctctccccatgtcctgtgaggctgac
ggcagtctctcttctggctctggcctggagtccattggcatccctactacctcctctacc
gctgccgtattctcccaggatgcaatggggacggataccaccgcaacggcggcggagtct
gccttctgtctgtctgttgctgaagtcaatacaaaccctactgccaacccttacccctgt
gcctcggtgtgtgtgtattcacaatggatgcacaacaaccatctcccagaacttatctag
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