KEGG   Oncorhynchus kisutch (coho salmon): 109899451
Entry
109899451         CDS       T09179                                 
Name
(RefSeq) poly(U)-binding-splicing factor PUF60 isoform X1
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109899451
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oki03041]
    109899451
Spliceosome [BR:oki03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109899451
 Complex B
    109899451
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 109899451
NCBI-ProteinID: XP_020350287
Ensembl: ENSOKIG00005002382
LinkDB
Position
LG11:62064438..62078002
AA seq 549 aa
MMENGQGTGGKLGLPPLTPEQQEALQRAKKYAMEQSIKSVLVKQTIAHQQQQLTNLQMAA
VTMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSW
DSVTMKHKGFAFVEYEIPEAAQLALEQMNSVMLGGRNIKVGRPGNIGQAQPIIDQLAEEA
RAYNRIFVASVHPDLSDEDIKSVFEAFGRIKSCTLARDPTTGRHKSFGFIEYDKPQSSLD
AVSSMNLFDLGGQYLRVGKAVTPPMPMLTPTQPGGLPPAAAVAAAAATAKITAQASMIPF
QRDLLAFQEAVTGASILGAMAGANQMGQMSQMGQMGQMGSMGIPQAVMAAQAPGMITGVY
RDMCVTPVRPNLPVLPQVGLVNPVLASPPVITNPAQINPSLQELQKKKQEEKEMLQDGTG
QEMLSDQEHMSISGSSARHMVMQKLLRKSESTVMVLRNMVGPEDIDDDLEGEVTEECGKF
GAVNRVIIYQEKQGEEEDAEIIVKIFVEFSMVSEMNKAIQALNDRWFGGRKVIAEVYDQE
RFNSSDLSA
NT seq 1650 nt   +upstreamnt  +downstreamnt
atgatggagaatggacagggcacaggtgggaagcttggcctgccgcctctcaccccggag
cagcaggaggctctacaaagggcaaagaaatatgccatggagcagagcattaagagtgtc
ttggtaaagcagaccattgcccatcagcaacagcagctcaccaacttgcagatggcagca
gtgacaatgggctttggagatcctctctcacctttacaatcggtggcggctcagcgtcag
cgtgctctagccatcatgtgccgggtgtatgtgggctccatatactatgagctcggggag
gacaccatcagacaggcctttgccccttttggccccatcaagagcattgacatgtcatgg
gactccgttacaatgaagcacaagggctttgcctttgtggagtatgagatcccggaggcg
gcacagctggctttggagcagatgaactcagtcatgcttgggggcaggaacatcaaggtg
gggcggccaggtaacattggtcaggcgcaacccatcatcgaccagctggcagaggaggcg
cgcgcctacaaccggatcttcgtggcttccgtccacccagacctctcagacgaggacatc
aagagcgtctttgaggccttcgggaggatcaagtcctgcacgttagccagggaccccacc
acaggaagacacaagagctttggcttcatcgagtatgacaagccccagtcgtccctggat
gcagtgtcctccatgaacctgtttgacctggggggccagtacttgcgggtgggcaaggcc
gtaaccccgcccatgcccatgctgacccccacccagcctggtggcctgccgcccgctgca
gccgtggctgctgcagcagccaccgctaagataacggcccaggcaagtatgattcccttc
caaagggatctattggccttccaggaggctgtgaccggggcgtccatcttgggggcgatg
gccggggcgaaccagatgggccaaatgagtcagatgggacaaatgggacaaatgggctcc
atgggcatccctcaggcagtcatggctgcccaggcccccggaatgatcacaggtgtgtat
cgagacatgtgtgtgacaccagtgcgtcctaacctgccagtgctgccccaggtgggcctg
gtcaaccctgtgctggcctcaccgcctgtgatcaccaacccggcccaaataaacccctct
ctacaagagcttcagaagaagaagcaggaggagaaagagatgctgcaggatgggacaggc
caggagatgttgagcgaccaagaacacatgagcatttccggaagcagcgccaggcacatg
gtcatgcagaaactgctgaggaaatcagagtctacggtgatggtgttacggaacatggtg
gggccagaggacatcgatgacgacctggagggcgaggtgacagaggagtgcggcaagttt
ggtgccgtaaaccgggtcatcatctaccaggagaagcagggggaggaggaggatgccgag
atcatcgtcaagatctttgtggagttctccatggtctcggagatgaacaaggccatccag
gcactcaacgaccgctggtttgggggtcgcaaggtcatcgcggaggtctacgaccaagag
cgctttaacagtagcgacctctccgcataa

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