Oncorhynchus kisutch (coho salmon): 109899470
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Entry
109899470 CDS
T09179
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04140
Autophagy - animal
oki04148
Efferocytosis
oki05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109899470
04148 Efferocytosis
109899470
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109899470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109899470
Membrane trafficking [BR:
oki04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
109899470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
Beta-prop_HPS5
WD40_Prp19
zf_RING_Vps8_fungal
Beta-prop_EML_2
TPR_7
WD40_WDHD1_1st
Vps39_1
Beta-prop_RIG_2nd
TPR_19
zf_RING_Vps8
TPR_17
TPR_GEMI5
TPR_PEP5_VPS11
zf-Vps39_C
Frtz
Helicase_PWI
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
109899470
NCBI-ProteinID:
XP_020350331
Ensembl:
ENSOKIG00005046386
UniProt:
A0A8C7KSD9
LinkDB
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Position
LG11:complement(61222706..61238387)
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AA seq
854 aa
AA seq
DB search
MAEVKEKGRKPSEESTDESEEEDSVEEPKLKYERLANGVTEILQKDAASCMTVHDKFLAL
GTHFGKVFLLDIQGNVTQKFEISPVRINQISLDESGEHVGICSEDGKVQVFGLYTREGFH
ENFDCPVKVVALHPRFSSSNYKQFVTGGNKLLLYERNWLKRWKTSTLHEGEGTITNVRWR
ANLIAWANNVGVKIYDISTKQRITNVFRDNVSLRPDMYPCSLCWKDNSTLIIGWGSSVKI
CAVKERDHAEMRDLPSRYVEIVSAFETEFFISGLAPLADQLVNLYFVKENSDHVEEEFRA
RPRLDIIQPLPEGFEEISSDALTVRNFQENECRDYRLEHSEGESLFYIISPKDIVVAKER
DQDDHIDWLLDKKKYEEALMAAEISFKNVKRHEVQKIGMAYINHLVEKGDYDTAARKCQK
VLGKNMELWENEVYRFKTIGQLKAISQYLPRGDLRLRPAIYEMILNEFLKTDYEGFATLI
REWPGELYNNMTIVQAVADHLKKDPTNSTLLTTLAELYTYDQRYDRALEIYLRLRHKDVY
QLIHKHNLFSSIEDKIVLLMDFDKEKAVDMLLDNEDKISTDRVVEELRDRPELLHIYLHK
LFKRDHHKGQRYHERQIGLYAEYDRPNLLPFLRDSIHCPLEKALEICQERNFVEETVFLL
SRMGNCRRALQMIMEELEDVDKAIEFAKEQDDAELWEDLISYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILHDYNLQILLREGCEKILVADSLSLLQKMHRTQM
RGVRVDEESICESCHASILPSDMAQNFSVAVFHCRHMFHKECLPSPGTIPGVQFCNICSA
KRRGPGSGILEMIK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagtaaaggagaagggcaggaaaccaagtgaagaatccacagatgagtctgag
gaggaggacagtgtggaggagcctaagctgaagtatgaacgattggccaatggggtgact
gaaattctccaaaaagatgctgccagctgtatgactgtccatgataagttccttgcgctg
ggcactcactttgggaaagttttccttctggacatccaaggcaatgtgactcagaagttt
gaaattagtccagtgaggatcaaccagatcagcctagatgagagcggagagcatgttggg
atctgctctgaggacggcaaggttcaagtgtttggactctacacaagggaaggcttccat
gagaactttgactgtcctgtcaaagtggtggcgttacaccctcggttcagcagttcaaac
tacaaacaatttgtcactggaggcaacaagcttcttctgtatgagaggaactggctgaaa
cgctggaagacgtccactctgcacgaaggggagggcaccatcactaacgtccggtggagg
gccaatctcatcgcctgggccaacaatgtgggggtgaaaatctatgacatcagcaccaaa
caacgaatcaccaacgtcttccgggataacgtcagcctgcggccggatatgtacccatgc
agtctgtgctggaaagataactccaccctcatcatcggctggggctcctccgttaagatc
tgtgccgtgaaggagagggaccacgcggagatgagagaccttcctagccgttatgtggaa
attgtgtctgcgtttgaaaccgagttcttcatcagtggcctggcgcctctagcagaccag
ctggtcaacctgtactttgtgaaggaaaactctgaccacgtggaggaggagttcagagcg
cggcctcgtctggacatcatccagcctctcccagagggctttgaggagatctcatcagac
gccctgaccgtccgcaacttccaggagaacgagtgtcgagactaccggctggaacattct
gagggagaatcccttttctacatcatcagccctaaagacattgtggtggccaaagagaga
gaccaggatgaccacattgactggctgctggacaagaagaagtatgaggaagctctgatg
gctgctgagatcagcttcaagaatgttaaacgccatgaagtccagaaaattgggatggcc
tacataaatcacctggtggagaagggtgactacgacaccgctgccaggaagtgtcagaag
gtgctggggaaaaacatggaactctgggagaatgaggtgtacaggtttaaaaccattggg
cagttgaaggccatcagccaatacttgcccagaggggacctgcgtctcagacctgccata
tatgagatgatcttaaatgagtttctaaagacggactatgagggctttgccacgttgatc
cgcgagtggccaggagagctctacaataacatgaccattgttcaggcagtcgccgaccac
ctcaagaaggaccccacgaacagcaccctgctcaccacactggctgaactgtatacatat
gaccagcggtatgaccgagccctggagatctacttgagactgaggcataaagatgtttac
cagctgatccacaaacacaacctcttctcctccatagaagacaagattgtgctcctcatg
gactttgataaagagaaagctgtcgacatgctcctggataatgaagacaaaatatcgacc
gacagagtagtggaggaactccgggacagacctgagctgctacacatttacttacacaaa
ttgttcaagagggaccaccacaagggtcagcggtaccatgagagacaaattggcctgtat
gctgagtatgatcggcccaacctgctgccattcctcagggacagcatccactgcccacta
gaaaaggctctggagatttgtcaggagagaaactttgtggaggagactgtcttcctgctc
agcaggatggggaactgtagacgggcccttcagatgatcatggaggaactggaggatgtg
gacaaggccatagagtttgctaaggagcaggatgatgctgagctgtgggaggatctcatc
tcctattctattgataagccacccttcattactggtctccttaataacattgggacacat
gtggatcccatcttgctcatccaccgcataaaggagggaatggagattcctaacctccga
gattctctagtcaagatcctacatgactacaacctgcagatcttgctgcgggagggctgt
gagaaaatcttagtggctgactccctctccctgctccaaaagatgcataggactcagatg
agaggagtccgagtggatgaagagagcatctgtgaatcctgtcacgcgtcaatattacca
tcagatatggctcagaacttcagtgtggctgtcttccactgcagacacatgttccacaag
gagtgtttaccttctcctggaacaattcctggagtccagttttgcaacatctgcagtgca
aagcggagaggaccaggaagtgggatactggagatgataaagtga
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