Oncorhynchus kisutch (coho salmon): 109899542
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Entry
109899542 CDS
T09179
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like
KO
K09299
zinc finger homeobox protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109899542
Transcription factors [BR:
oki03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
109899542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
Homeodomain
zf-C2H2_15
zf-H2C2_5
zf-met
Zn_SUZ12
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
109899542
NCBI-ProteinID:
XP_020350461
Ensembl:
ENSOKIG00005043958
LinkDB
All DBs
Position
LG11:complement(52915408..53004606)
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AA seq
1185 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYSNVVKAPGSDSDDEDKLHIVEEDGSLADGADCDSNVP
SEDHNGDRWDEVREECGSDGEDDGSTDALVEEILQQGDTTIIYPEAPEDEPRQGTPEASG
HDENGTPDAFSQLLTCPYCARGYKRYTSLKEHIKLRHEKSEDNFSCSQCSYTFAYRTQLE
RHMSAHKAGRDQRHMTQSGGNRKFKCTECEKAFKYKHHLKEHLRIHSGEKPYECSNCKKR
FSHSGSYSSHISSKKCIGVISAVNGRPLPAKASQCPSPAMPASPSSTTRTQTRDKPLQEQ
LPLNQIKSEPMDYEYKPMVVSPAAGATGVNGHGGGVFNGGAAAPLQGAVQAVMLPTMGLV
SPISINLADLQNVLKVAVDSNMIRQMLENNAKSAGTGMGATGVPHQQLISAISLPIMGQD
GNATKIIINYSLDPSQTQTQLTAQNLKKEPPTLATTPGQAQAATEPSSKTQQKLPEDLTV
SRPPRSKEEKMEEETTKNCLLCNECPNGLDALHTLKHCKKASGLRINGDKSKSAIDSLLS
EGFGDQPKNLLSLLKAYFALNVEPTKEELSKISDSVSLPADVVKKWFDKMQSGQVSLGAP
TPPSEEEGPLSECHGAIVVSPKVRSEQNTESPTLMQSSPAEATPAEVNGSGPCPASPTPL
NLTTGGAVPAKPSSSDSTEVPLDLSLPKPLREETAATAASYQATVYSHQDEPLNLTKTCT
TKKELPLSAGAAGHHMTSQTLSFYTAGPQSANPISIMTTQLPSGTIYAITDQGSTGVSCL
RALTTNNNQTILIPQLAYTYTTTATASSPAGTETQEKTTLQINGIKEERQDTSSEGVYTM
EEQNDSDTTPSRNKMRKTESGLYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICRKAF
KHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKKEAQGGGQGGVGEE
VLEIESPVGLGLGGEQPEQSDSRPTSSPPSHLDSDERGSSTREEEESDEEDMETVAGEAV
EGDPDSILDMDDIQVVRIGDEGGEEEEEREEEGEVTGQEGGENAEGEEQGVKRIVVGGEE
EEGEEEGLVGVEVKEEQEEKEVTEEKAHTRQEEVKENREKEEEHGGEKEQDEKEVEEEQS
EQAQEEVKEETMDTEEAVTSEEKEESGEVMKENEGETNGNTVSDD
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcaaatccgaggaggaataacgta
accaactacagtaatgtagtgaaggccccaggctcagattcagatgatgaggacaagctg
cacatcgtggaggaggacgggagtctggccgacggggctgactgtgacagcaacgtaccc
agtgaagatcacaacggagaccgctgggatgaagtgagggaggagtgtggttctgatggg
gaggatgacggcagtacagatgctctggtggaggagatactgcagcagggagacacgacc
atcatctacccagaagcccctgaggacgagccccgccaggggacgcccgaggccagcgga
catgacgagaatggcactccggatgcgttctcacagctcctcacctgtccctactgtgcc
cgcggctacaagcgctacacgtccctgaaggagcacatcaagctgcgccacgagaagagc
gaggacaacttcagctgctcccagtgcagctacaccttcgcctaccgcactcagctggag
agacacatgagtgcccacaaagctggcagagaccagaggcacatgacacagtcggggggc
aaccgaaaattcaagtgcactgaatgtgaaaaagcatttaagtacaagcatcacctgaag
gagcacctacgcatccacagcggagagaagccatacgagtgctccaactgtaagaagcgt
ttctcccactccggctcctacagctcccacatcagcagtaagaagtgcatcggcgtgatc
tcagcagtcaacggccgacccctgcccgccaaggcctcccaatgcccatccccagccatg
cccgcctcgccctcctccaccacacgcacccagacccgagacaaacccttgcaggaacag
ctacccctcaaccagatcaagagcgagccaatggactacgagtacaagcccatggtagtg
tctccagcagcgggggcaacaggagtgaacggtcacggaggaggggtgttcaacgggggt
gcggctgccccactgcagggcgcggtgcaggcggtgatgctccccaccatgggcctggtc
tctccgatcagcatcaacctggcagacctacagaacgtcttgaaggtggcggtggacagt
aacatgatcagacagatgttggagaacaatgctaagtcagcggggactggcatgggggcg
acaggtgttcctcaccagcagctcatctcagccatcagtctgcccattatgggtcaggat
ggcaacgccaccaagatcatcatcaactacagcctggaccccagccagacacagacccag
ctcactgcccagaacctgaaaaaggagcccccgaccctggctacaacaccaggccaggcc
caggctgccacagagccttccagcaagacccagcagaaactcccagaggacctgacagtt
agcaggccccccaggagcaaagaggagaagatggaagaggagactactaagaactgcctg
ctttgtaatgagtgccccaatggtctggacgctctccacacactcaagcactgtaagaaa
gcctcaggcctcaggatcaatggggacaaatcaaagtctgccatcgattcattattgtct
gaggggttcggggaccagcccaagaaccttctgtccctcctcaaggcctacttcgcctta
aatgttgagcccaccaaggaggagctcagcaagatctccgactcggtcagcctgcctgcc
gacgtagtcaagaagtggtttgacaagatgcagagtggtcaggtctcactaggggccccg
acccctccgtctgaggaagaagggcccttgtctgagtgtcatggggccattgttgtgtcc
cctaaagtaagatcagagcagaacacagagagccccaccctgatgcagtctagcccagct
gaggccactccggctgaggttaacggctctgggccctgcccggcctcccctacaccacta
aacctgaccaccgggggggccgtcccagccaaaccctcctcctcagacagcacggaggtc
cccctggacctgtcgctaccaaagcccctccgagaggagaccgctgccaccgcagcctct
taccaagccactgtttactcccatcaggacgaacccctgaacttgacgaagacttgcaca
accaagaaagaacttccgctctctgcaggcgccgcaggccaccacatgactagccaaacc
ttgtccttttacaccgccggcccacaaagtgccaaccccatcagcatcatgaccactcag
ctgcccagcgggaccatctatgccatcactgatcagggcagcacgggtgtgtcctgcctc
cgggcgctcaccaccaataacaaccagactatcctcatcccacagttggcctacacctat
accactacagctacagccagcagccctgcagggacagagacacaggagaagaccacactg
cagatcaacggcatcaaggaggagcgtcaggacacaagctcagagggcgtgtataccatg
gaggagcagaatgactcagacaccaccccttccaggaataagatgaggaagactgagagt
gggttgtacgcctgcgacctgtgtgacaagatcttccagaagagcagctctctgctccga
cataaatacgaacacacaggcaagcgaccccacgagtgtggcatctgcaggaaggccttc
aaacacaagcaccacttgatagaacacatgcgtctccactccggagagaaaccctaccag
tgcgacaagtgtggcaagcgcttctctcattcaggctcttactcccagcacatgaaccac
cgctactcctattgcaagaaggaggcgcagggaggaggtcagggaggtgtaggggaggaa
gtgctggagattgagagccccgtggggttgggcctgggaggggagcagccggagcagtca
gacagcaggcccacctcctcccctccctcccacctggactcggacgagcgagggagcagc
accagagaggaggaggagagtgatgaggaggacatggaaacagtggcaggggaggcggtg
gagggagatccagacagcattctggatatggatgatatacaagtggtacggataggagat
gagggaggggaggaggaggaggagagagaggaggagggggaagtcactggtcaggagggg
ggagagaatgcagaaggggaagagcaaggagtgaagagaatagtggtagggggtgaagag
gaggaaggagaagaagaggggttagtgggggttgaagtaaaggaagagcaggaagaaaag
gaggttacagaggaaaaggcacatacaaggcaagaggaggtgaaggagaaccgtgagaaa
gaggaggaacatggaggagagaaggagcaggatgagaaggaagtggaggaggagcagtca
gagcaggctcaggaggaggtgaaggaggagacaatggacacagaggaagcggtgacctca
gaggagaaggaagaatcaggggaggtcatgaaagagaatgaaggtgaaacaaacgggaac
actgtttcagatgactag
DBGET
integrated database retrieval system
