Oncorhynchus kisutch (coho salmon): 109899579
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Entry
109899579 CDS
T09179
Name
(RefSeq) myopalladin-like isoform X1
KO
K22028
myopalladin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109899579
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109899579
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
109899579
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
Ig_VEGFR-1-like_5th
V-set
Ig_PDGFR_d4
VEGFR1-3_N_Ig-like
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
109899579
NCBI-ProteinID:
XP_020350519
LinkDB
All DBs
Position
LG11:complement(47847164..47897607)
Genome browser
AA seq
1919 aa
AA seq
DB search
MQEDNVNQPTSLSQLLRENYLAEARARHSGMSRSDSSRHLVYAPLKGKAEDSAGQDKPQP
QFPDLSAFLSQEELDKSVNLACQAIGHEACEERTEFKAPVTPSVTSTASNTPDTQPDLEL
KEPLPTHVTFFPERRSFSPLSIPDNVIRIDKQIYQPSQLSIQDNAIRTDRQKYPLSQPSI
QDNNTRTDRELYPPSIQDNDTRTDRELYPPSIQDNGMRTDRQTFPPSIIQDITMNNWVAR
EDFKRSGARGINTPEYGLGTQSKKEFLNKAADFIEELSSLFKANSSKRIRPRSCKTHRSR
ANKGQVDGSVYSLNADNRERTILLQDFETEMEMERPTNPFSIQPSEVQGLGMDPGFGHAY
FPMQDWRTTEEQYDEAESPALVEITPGVYTADPICEPPHFIQKLKSREVLEGSKVQLDCI
VRGLPMPEVRWFCEGKELENCPDIQIINNGELHSLTIAEAFEDDTGRYSCFASNFYGTGS
TSAEIYVEGASSTDSEGEQHSELAQLQRTRAQPGAQSLPPVVSVVSLCVDDATICTEEQP
QEATSLPSSQVVTASVPVQVATNVLPVTEVTTAPSTKVAFTLVPAQEMSAQLPVQEVSTL
DLPPVDTVSVLSLPTPSRVPVTSTPLPTQTVSTTALPLTQVVSSTLPAQVAAVQTTLAEN
LNGDSYTLSPDIYPQGLDGRPIIAAPVFTKSLQDLLASESELVVLECRVKGVPSPKVDWY
REGTVIEDSPDFRILQKKPRSMDESEEICTLVIAEVFPEDSGKFTCTASNKYGTVSSIAA
LRVKGNENTNNNHVKTLVGTLTMESTQVPEPSSTDLTLPRLKPQAEALVTNSIKPHSSTI
RLDPFSSSNLRLEPLSTSTLRLDPLNSSMLRQVPISPSMPSLDPLSLGSSLRIGTRSSNT
YHLDPLYLSTPHPDLPTSSSGLCQEPQSSGEMPKTDQGDSRAFSVLPDPPVGLRPKVEGT
PIHKPEPPPHVNLPDPPNSSCLKPGVLVNHNGPRSSSRAGLRVHFKLPEDETENQSEASN
SHSYEDVSQLANKEPPPVLAKPKLDPVQLQLLHNQVLMEQQQTETEPNGATKSQPEASAW
PAQTHHESQAQTQAQPQSNLPRSSTPMLLQTTHAAPILTTAPTPFLNSAPVTSLNTTPTP
QLNTSPPAHLLNIASAPLLNPYTTHSYSTSSPLLNTSPVPPKNTTSATLLNTAPPAPVMG
TLPSLPQLKTAPSCKSSPPSASLLRTVPAPHLYTSPASPPYMTQQNTTHSSQLNLTHSSL
PKAIHVPKFSTPPTPHLNTAPTASLSSIPVAFNKAPTTMQNTSPTPLLRTTHASLLNLAP
TSQSFNYSRPKEFITAQTPLSPFTSPSPTESPVPLLHKLAAELNSSNPNQFSPQPRVLPT
RVLKSPTSPPSFMSSPTSLTMLPAAYLNAVFALPQQSPPQAASPTSSTSSPIQNHVAFLS
SVLPSLHTTQATNSMGLPRSAHRPPQGILKKLPTSTRPILDDDIRSSQQTLLHDIEKKLR
FNEDLMRGHVQQKPTTYEGKTASRHLGPNIPATVFNYDEEYKVSNFEQRLMSEIEFRLER
TPVEESDDEVQHDEIPTGKCIAPMFGKKLKNFRAMEGVPITFSCKVVGIPVPKVYWFKDG
KQILRKNYHYKKIREGDGTCALHIEVTNNDDDGNYTVLAANPQGRISCSGHLIIQTGPLR
NRMTPMIHSQRVRARIQEVEEGEPTQERFFQPHFLQAPGDMVAHEGRVCRLDCKVSGLPN
PELMWLINGRPIYPNFYHRMLVRENGIHSLVIDPLKQDDAGTYTCIASNKAGQSSFGLEL
RVVEKEMKQVPQFVEKLQNTGIAEGTPVRLECRVLGMPPPVIYWKKDNDTIPHTKARVSL
HQDATGYVFLLIQPTRKEDAGWYTVSAKNEAGIVSCTARLDIYAQWHQHVPLPMKKAPW
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaggacaatgtgaaccagcctacatcattgtctcagctcttgagagagaactac
ttggccgaagcgagggcgagacacagcggcatgagccgttccgactcctcgcggcacctg
gtctacgcgcccctcaaaggcaaggcggaggactccgcggggcaggacaagccccaaccc
cagttcccagacctctcagccttcctgagccaggaagaactggataagagtgtcaacctg
gcctgtcaggctatcggacacgaggcctgcgaggagaggacagagttcaaggccccggtc
accccttctgtcacctccactgcatccaacactcccgacacccagcctgacctggaatta
aaagaacccctaccaacacatgtgacattcttcccagagagacggtcattctcacctctg
tccataccagacaatgtgataaggatagacaaacagatatatcagccatcccaactgtcc
attcaggacaacgcaataaggaccgacagacagaaatatccactgtcccaaccatccatc
caggacaacaacacgaggacagacagagagttgtacccaccgtccatccaggacaacgac
acgaggacagacagagagttgtacccaccgtccatccaggacaatggaatgaggacagac
agacagacgttcccaccgtccatcatccaggacattacaatgaacaactgggtggccagg
gaggactttaagaggtcaggggctagggggataaacactccagagtacggcctggggacc
cagtccaagaaggagttcctcaacaaggcagcagacttcatcgaggagctctcctctctg
ttcaaggctaacagctccaaaaggatacggcccagatcatgcaaaactcataggagcaga
gccaacaagggtcaagtggatgggagcgtttactccctgaatgcagacaacagggaacga
accattcttctccaagacttcgaaacggaaatggagatggagaggcctactaatcctttc
agcattcagccatcagaagtccagggtttgggcatggatccagggtttgggcatgcttac
ttccccatgcaggactggaggactactgaggagcagtatgatgaggctgaaagccctgcc
ctggtggagatcacccccggggtgtacacagccgaccccatctgtgagccccctcacttc
atccaaaaactgaaaagcagggaggtgctggagggcagcaaggtacagctggactgcatt
gttcgaggactccccatgcctgaagtccggtggttttgtgaggggaaggagctggagaac
tgccctgacattcagatcatcaacaacggcgagttgcactctctgaccattgccgaggca
ttcgaggatgacacagggcggtactcttgctttgcatccaacttctacggcacaggctct
acgtcggccgaaatctacgtcgaaggtgcctcctctacagattcggagggggaacaacat
tctgaacttgcacaactacagaggacccgagctcagccgggtgcccaatctttacctcca
gtggtcagtgttgtgtctctgtgtgtggatgacgcaaccatctgcactgaagaacagcca
caggaggccacctcactgccttctagccaggtagtcactgcatctgtacctgtccaggta
gctactaatgtccttcctgttacggaggtgacaacagcaccatctaccaaggtggcgttt
acattggtccctgcccaggagatgtcagcacagttacctgtccaggaagtttctactcta
gatctaccgcccgtggacacggtgtcagttctgtcactgccaacaccgtcacgtgtccca
gtgacgtccacaccattaccgacacagacagtctctaccacggcactaccgctgacccag
gtggtctcctctacactgcctgcccaggttgctgcggtacagacgactctagccgagaac
ctaaatggagacagctatactctaagtccagacatctatcctcaaggtctagacgggagg
cctatcattgctgcccccgttttcacaaagagtctgcaggacctgttggcatcggagagc
gagctggtggtgctagagtgccgtgttaaaggagtcccctcccccaaggtggactggtac
agagaaggaactgtcatagaggactcccctgacttcaggatcctgcagaagaagcctcga
tccatggatgaatcagaggaaatatgcactttggtcattgctgaagtctttcctgaagat
tctggaaaattcacttgcactgcaagcaacaaatatggaactgtatccagtatcgctgca
ctacgggtgaaaggaaatgaaaacaccaacaacaaccacgtgaaaactctcgtaggcact
ttaacaatggagtccacacaagttccagagccttcttcaacagatctcactctgcccaga
ctaaagcctcaagctgaggctcttgtcaccaacagcatcaagcctcactccagcaccatc
cgcctggatcccttcagctccagcaatttacgactggaacctctgagcaccagtaccctc
cgtctagaccctctgaactccagcatgctgcgccaggtgcctatcagccccagcatgccc
agcctggatccactaagcctgggcagcagcctccgtataggcacccgtagctccaacaca
tatcatctggacccactctacctgagcacccctcacccagacctgcctactagctccagt
gggctatgccaggagccccagagcagtggtgagatgcccaagactgaccagggagactcc
agagccttttcagtgttacctgaccctcccgttggtcttcggcctaaggtggaagggact
cctatccataaacctgagccccctccccatgtaaacctccctgatccccccaactcctcc
tgccttaaacctggggttctggttaaccacaacgggcccaggtccagctccagggcaggc
ctccgtgtgcactttaaactgcctgaggatgaaacggaaaaccagagtgaagcatccaat
agccattcatatgaagatgtgtcgcagttggccaataaggaaccacctccagtactggcc
aagcccaaactagaccctgtccagctgcagcttctgcacaaccaggtgcttatggagcag
cagcagactgagactgagccaaacggagccaccaagagccaaccggaggcatctgcctgg
ccagcccagacacaccacgagtcccaggcacagacccaagcccagcctcagtcaaacctg
ccccgttcatctacccccatgctcctgcagaccacccacgccgcacccatactgaccaca
gccccaacaccctttctcaactccgcccctgtgaccagcttgaacactacccctacaccc
cagctaaacactagtccccctgcccacctgctaaacattgcatctgcaccactactgaac
ccatacaccacccattcctattctacttcttcacccctgctaaacacaagccctgtacca
ccaaagaacactacctctgcaacgctactgaacacagcccctcctgcaccagttatgggt
accctgccgtcccttcctcaattgaagacagctccttcttgtaagagctcccctccatct
gcctctctgctgagaactgttcctgcaccacacctgtacaccagccctgcatccccaccc
tatatgacccagcaaaacaccacccattcttcccagctgaatttaacccactcatccctg
cctaaagccattcacgtacccaagtttagcacacctcccacacctcatctgaatacagcc
cccacagcgtctctcagctccatccctgtagctttcaacaaggcacccacaaccatgcag
aacacctcccccactcccctgctcagaacaacccacgcctccctcctcaacctggctcct
acgtcacagagcttcaactactctaggccaaaggagttcatcactgcccagactcccctc
tctccatttacgagtccctctcctacagagtcccccgttccgttgctccacaagctggct
gccgagctcaactcctccaaccccaaccagttctctccgcaacccagagtcttacccacc
agagtcctcaagtcacccaccagccccccttccttcatgtcctcccccacctccctgacc
atgttgcctgctgcctacctaaacgctgtgttcgccctgccacagcagtcgcccccgcag
gcagcgtccccgacctccagtacctccagccccatccagaaccatgtggccttcctcagc
tctgtcctgccctctctacacaccacacaagccaccaactctatgggtctgcccaggagt
gctcataggccacctcaaggcatactgaagaagttgcctacaagcactcgtcctatttta
gatgatgatattcgtagcagccaacaaactctcctccacgatattgagaaaaagcttagg
ttcaatgaagatttaatgcgtggtcatgtacaacagaagccgactacttatgaggggaaa
acagcgagcagacacctcggaccaaacattcccgccactgtctttaactatgacgaggag
tacaaagtgtccaactttgagcagaggctgatgagtgagatagagttccgtctggagcgc
acgccagtcgaggagtcagatgacgaggtacaacacgatgagatcccaacagggaagtgc
atcgctcccatgtttggcaaaaaactgaagaacttcagggccatggagggtgtgcctata
acgttctcctgtaaagtggtggggatccctgtacctaaggtttactggttcaaggatggc
aagcagatcttgagaaaaaattatcattataagaagatacgagagggggacggaacctgt
gcactacacatagaggtcaccaataacgacgatgatggcaactacactgtcctggcagct
aacccccagggacgaatcagctgctccggtcatttgatcatccaaacaggtcctctccga
aaccgaatgacacctatgattcactctcagagggtgcgggcccgcatacaggaagtggaa
gagggtgaaccaacccaggaacgcttcttccaacctcacttcctccaggctccaggggac
atggtggctcatgagggcagagtctgtagattagactgcaaggttagtggccttccaaac
ccagagctgatgtggctgatcaacgggaggcccatctacccaaacttctaccaccggatg
ctggtgagggagaatggaatccattcccttgtcatagaccctctaaaacaggacgacgct
gggacatacacttgcattgccagcaacaaagcaggacagagctccttcggtctagagtta
agagttgtggaaaaagagatgaagcaggtcccccagtttgtggagaagctccagaacaca
ggcatcgcagagggcacccccgtccgactggagtgcagggtgctgggcatgcctccacct
gtcatctactggaagaaagacaatgacaccattcctcacaccaaggccagagtcagctta
caccaggatgccactggatatgttttcctcctgattcagccaaccaggaaagaggatgct
ggctggtacaccgtatcagcaaagaatgaggctggaattgtttcatgcacagcgagacta
gacatctatgcccagtggcatcaacatgttcctctgcctatgaagaaggctccgtggtaa
DBGET
integrated database retrieval system