Oncorhynchus kisutch (coho salmon): 109899580
Help
Entry
109899580 CDS
T09179
Name
(RefSeq) nucleolysin TIAR-like isoform X2
KO
K13201
nucleolysin TIA-1/TIAR
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109899580
03041 Spliceosome [BR:
oki03041
]
109899580
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
109899580
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109899580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
PHM7_cyt
RRM_Nup35
Nup35_RRM_2
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
109899580
NCBI-ProteinID:
XP_020350521
Ensembl:
ENSOKIG00005024612
LinkDB
All DBs
Position
LG11:47809181..47830960
Genome browser
AA seq
408 aa
AA seq
DB search
MEDECHPKTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEQPDSRRMNSSVGFSVLQQ
SSNDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDL
SPEITTEDIKAAFAPFGKISDARVVKDMTTAKSKGYGFVSFYNKLDAENAIVHMGGQWLG
GRQIRTNWATRKPPAPKNVQDNGSKQLRFEDVVNQSSPQNCTVYCGGIQSGLSEHLMRQT
FSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTSIECHIVKCYWGKESPDIAKS
VPQMEYGQGQWGQWSQMYGSPQAQQYGQQYMANGWQVPSYGVSYGQSWNQQGFGVEDSIL
AAAAQNLSRQSQSPAWVGGFGSPAPSQPQTGPVMPNQGNFNMAGYQTQ
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaatgccaccccaaaaccctgtatgttggtaacctgtccagagatgtaaca
gaaattttgattcttcagctgttcacccaaattggaccttgcaaaagttgtaaaatgata
actgagcaacccgatagcaggaggatgaactcttctgtcggattttctgttttgcagcaa
tcaagcaatgacccgtattgctttgtggagttctttgaacatagagatgctgctgctgcc
ctagcagccatgaacgggaggaagatattgggaaaggaggtcaaagtaaattgggcaacc
actccaagtagccagaagaaagacacatctaatcacttccatgtatttgttggagacctg
agccctgagatcaccactgaggatatcaaagctgcatttgcaccttttgggaaaatctcg
gatgctcgtgttgtgaaggacatgactacagcgaaatctaaggggtatggatttgtgtcc
ttctataacaaactggatgcagagaatgccattgtgcacatggggggacagtggttaggg
ggacgccagataaggaccaactgggcaactcgcaagccacccgccccaaagaatgttcaa
gacaatggctcgaagcagctgaggtttgaagatgtagtgaaccaatccagtccccagaac
tgcaccgtgtactgtggaggaatccagtccggactatcagagcatctcatgcgacagaca
ttttcaccctttggacaaattatggaaataagagttttcccagagaaaggttactctttc
atcaggttttcctcccatgaaagtgctgcccatgcaattgtttctgtaaatggaacatcc
atcgaatgccacatagtgaagtgctactggggcaaagaatcccccgatattgccaaaagc
gtaccacagatggagtatggtcagggtcagtggggacaatggagccaaatgtatgggagc
ccccaggcccagcagtatggacaacagtacatggcaaatggttggcaggtgccctcttat
ggagtgtcttatggacagtcttggaatcagcaaggatttggtgtagaggactccattctg
gctgcagcagcacagaacctttcaagacagtcccagtccccagcctgggttggagggttt
ggatccccggcaccatcccagccccagaccggtcctgtgatgcccaaccagggaaacttc
aacatggcaggctaccagacacagtga
DBGET
integrated database retrieval system