KEGG   Oncorhynchus kisutch (coho salmon): 109899580
Entry
109899580         CDS       T09179                                 
Name
(RefSeq) nucleolysin TIAR-like isoform X2
  KO
K13201  nucleolysin TIA-1/TIAR
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oki03019]
    109899580
   03041 Spliceosome [BR:oki03041]
    109899580
Messenger RNA biogenesis [BR:oki03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     109899580
Spliceosome [BR:oki03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    109899580
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded PHM7_cyt RRM_Nup35 Nup35_RRM_2 RBD_AKAP-17A
Other DBs
NCBI-GeneID: 109899580
NCBI-ProteinID: XP_020350521
Ensembl: ENSOKIG00005024612
LinkDB
Position
LG11:47809181..47830960
AA seq 408 aa
MEDECHPKTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEQPDSRRMNSSVGFSVLQQ
SSNDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDL
SPEITTEDIKAAFAPFGKISDARVVKDMTTAKSKGYGFVSFYNKLDAENAIVHMGGQWLG
GRQIRTNWATRKPPAPKNVQDNGSKQLRFEDVVNQSSPQNCTVYCGGIQSGLSEHLMRQT
FSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTSIECHIVKCYWGKESPDIAKS
VPQMEYGQGQWGQWSQMYGSPQAQQYGQQYMANGWQVPSYGVSYGQSWNQQGFGVEDSIL
AAAAQNLSRQSQSPAWVGGFGSPAPSQPQTGPVMPNQGNFNMAGYQTQ
NT seq 1227 nt   +upstreamnt  +downstreamnt
atggaagacgaatgccaccccaaaaccctgtatgttggtaacctgtccagagatgtaaca
gaaattttgattcttcagctgttcacccaaattggaccttgcaaaagttgtaaaatgata
actgagcaacccgatagcaggaggatgaactcttctgtcggattttctgttttgcagcaa
tcaagcaatgacccgtattgctttgtggagttctttgaacatagagatgctgctgctgcc
ctagcagccatgaacgggaggaagatattgggaaaggaggtcaaagtaaattgggcaacc
actccaagtagccagaagaaagacacatctaatcacttccatgtatttgttggagacctg
agccctgagatcaccactgaggatatcaaagctgcatttgcaccttttgggaaaatctcg
gatgctcgtgttgtgaaggacatgactacagcgaaatctaaggggtatggatttgtgtcc
ttctataacaaactggatgcagagaatgccattgtgcacatggggggacagtggttaggg
ggacgccagataaggaccaactgggcaactcgcaagccacccgccccaaagaatgttcaa
gacaatggctcgaagcagctgaggtttgaagatgtagtgaaccaatccagtccccagaac
tgcaccgtgtactgtggaggaatccagtccggactatcagagcatctcatgcgacagaca
ttttcaccctttggacaaattatggaaataagagttttcccagagaaaggttactctttc
atcaggttttcctcccatgaaagtgctgcccatgcaattgtttctgtaaatggaacatcc
atcgaatgccacatagtgaagtgctactggggcaaagaatcccccgatattgccaaaagc
gtaccacagatggagtatggtcagggtcagtggggacaatggagccaaatgtatgggagc
ccccaggcccagcagtatggacaacagtacatggcaaatggttggcaggtgccctcttat
ggagtgtcttatggacagtcttggaatcagcaaggatttggtgtagaggactccattctg
gctgcagcagcacagaacctttcaagacagtcccagtccccagcctgggttggagggttt
ggatccccggcaccatcccagccccagaccggtcctgtgatgcccaaccagggaaacttc
aacatggcaggctaccagacacagtga

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