Oncorhynchus kisutch (coho salmon): 109899662
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Entry
109899662 CDS
T09179
Name
(RefSeq) ATP-dependent RNA helicase DDX19A isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03013
Nucleocytoplasmic transport
oki03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109899662
03015 mRNA surveillance pathway
109899662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109899662
Enzymes [BR:
oki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109899662
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109899662
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
HNF-1_N
Motif
Other DBs
NCBI-GeneID:
109899662
NCBI-ProteinID:
XP_020350683
Ensembl:
ENSOKIG00005026862
UniProt:
A0A8C7MLW0
LinkDB
All DBs
Position
LG1:complement(10908504..10916432)
Genome browser
AA seq
506 aa
AA seq
DB search
MSTDSWAQAVDEQEAAAESIGNLQIKDKPEENGTANAALATTATKTTTTTTSTNTAAASA
TTPAKTGGGEGDKTGEEDDKDDKAAQSLLNKLIRSNLVNTTNQVEVLQRDPNSPLYSVKS
FEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAML
SHVDPNNKFPQALCVSPTYELALQTGKVIEQMGKHYSEVKLVYAIRGNKLQRGTQLQEQV
VIGTPGTMLDWCLKFKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKQCQMLLF
SATFEETVWNFAQRIVPDPNIIKLKREEETLDTIKQYYVLCNSKEEKFMALCNIYGAITI
AQAMIFCHTRKTAGWLAGELSREGHQVALLSGEMQVEQRAAVIDRFRDGKEKVLVTTNVC
ARGIDVEQVSVVINFDLPVDRDGNPDNETYLHRIGRTGRFGKRGLAINMVDSRFSMNVLN
KIQDHFNKKIEKLDTDDLDEIEKIAG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccgactcctgggcccaggctgtggacgagcaagaagccgcggcggaatcgatt
ggtaacctacaaatcaaagacaagccggaggaaaatggtactgccaacgctgcattggcg
acgacagcgacgaaaacaacaacaacaacgacgtcgacaaacacagcagccgccagcgct
acaacgcctgcaaagacaggaggaggagagggagacaaaacaggagaggaggatgataaa
gatgacaaggcggcacagtcgttattgaataagttgatacgcagtaatctagtgaacaca
accaatcaagtagaggttctacagagagatcccaactctccgctttactctgtcaaatcc
ttcgaggaactacggcttaaacctcagctgctccagggagtgtatgccatgggcttcaac
cgaccctccaaaatccaagagaacgcattacccatgatgctcgctgaacccccacagaac
ctgatagcccagtctcagtcagggacggggaagactgctgcctttgtcctggccatgctc
agtcatgttgatcccaacaacaagttcccacaggctctctgtgtgtctcctacctatgag
ctggccctgcagacaggaaaggtcattgagcagatggggaagcattactcagaggtcaaa
ctagtttacgccatcagaggaaacaaactgcagagaggtacccagctccaggagcaggtt
gtgatagggacgccaggcaccatgctggactggtgtctgaagttcaagttcatcgacccc
aagaagatcaaagtgtttgtcctggacgaagctgacgtcatgatcgctacacagggtcat
caggaccagagtatacgcattcagaggatgctacccaaacagtgccagatgctgctgttc
tctgccacgtttgaggagacggtgtggaactttgcccagcgcatcgtcccagaccccaac
atcatcaagctgaaacgggaggaggagacgctggacaccatcaagcagtactacgtcctc
tgtaacagcaaagaggagaagttcatggccctctgcaacatctacggagccatcaccatc
gctcaggccatgatcttctgtcataccaggaaaacggcggggtggttggcaggtgagctg
tcccgggagggccaccaggtggcgctgctcagtggggagatgcaggtggagcagagagct
gctgtcatcgaccgcttccgagacggaaaagagaaggtcctggtcaccaccaacgtctgt
gccagaggtattgacgtggagcaggtttccgtggtgataaactttgacctgccagtggac
agagacggtaacccggacaacgagacgtacctgcatcggattggccgcacgggtcgtttt
gggaagcgaggattggccatcaacatggtggacagcaggttcagcatgaacgtcctaaac
aagatccaggatcacttcaataagaagatcgagaagctggacactgacgatctggatgag
atagagaaaatcgccggctga
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