Oncorhynchus kisutch (coho salmon): 109899688
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Entry
109899688 CDS
T09179
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109899688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109899688
Membrane trafficking [BR:
oki04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
109899688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
DUF758
Motif
Other DBs
NCBI-GeneID:
109899688
NCBI-ProteinID:
XP_020350714
Ensembl:
ENSOKIG00005047404
LinkDB
All DBs
Position
LG11:40615134..40738712
Genome browser
AA seq
1922 aa
AA seq
DB search
MIIGHHCWAVSLSIEIAQDSILELLTGIRMVDKNIYIVQGEICTVVGAIKRNSRWNTHTP
LDEEQDPLLNSFSHLKEILNNMKELSDVEPNIFLRPFLEVVRSEDTTGPITGMALTSVNK
FLSYGLIDANHEAAAEAIENMADAVTHARFVGTDPASDEVVLMKILQVLRTLLLTPVGAH
LTNESVCEIMQSCFRICFEMRLSELLRKSAEHTLVDMVQLLFSRLPQFKEEAKSFVGANM
KKIPSCILNTQDLICTEQPKNTNQRGLERLKMRAGGMSESSKWKKQKRSPHPPRHMVRSA
SGGLEQAPTTTLSNNNLSGGVPFIEQDSLSVSDSVASSMSIPTDSGLDTCSKATSREDLT
DLDQSSSAATTPSTEPGHLYTQSEGRQVEHAQSVESIPEVLEDGESVTEHSDSASLHDMD
YVNPRGVRFTPQQTQRDGEDGAALIPYSLPCLRELFRFLISLTNPHDRHNTDAMMHMGLQ
LLTVALEAAHIAPYQSLLGLVKDELCRHLFQLLSVDRMNLYAASIRACFLLFESMRGHLK
FQLEMYLKKLMDIITSENMKMPYEMKEMALEALVQLSRIPSFVTELYINHDCDFYCSNLF
EDLTKLLSKNAFPVSGQLYTTHLLSLEALLTVIDSTEAHCQAKVLNSTTQQDHSAEMVLA
EGECSTNDRTDTTTEASRQVYSANGQNVPEADSVPLPPTSGHLMAEKMRLGRQDQEETEP
AEKKEPKKPRRFSSCLPDSQELLDIRNKKKLLNSGTEQFNQKPKKGIQFLQEKGLLSSPM
DNNEVAQWLRENPRLDKKQIGEFISDRKYMELLDSFVNTFTFRGLRIDEALRLYLEAFRL
PGEAPVIHRLLETFTDTWHKVNGSPFMTNDAGFALAYAVIMLNTDQHNNNVRKQNIPMTI
EQFKKNLKGVNGNTDFDQDMLEDIYNAIKNEEIVMPDEQSGLVKENYVWNVLLHRGATSE
GVFLHVPAGSYDHDLFTMTWGPTIAALSYVFDKSLDDTIIQKAIAGFRKCAMISAHYGFS
DVFDNLIISLCKFTTLSSESVENLPTVFGSNGKAQIAAKTMFHLAHRHGDILREGWKNIM
DSMLQLFRAELLPKAMVEVEDFVEPNGTISLQREETPSNRGESAVLSFVNWLTLSGAEQS
GQRGPSTENQEAKQAAMLCIKQCDPEKLITESKFLQLESLQELMKALISVTPDEETYDEE
DAAFCLEMLLRIVMENRDRVSCVWQTVRDHLCHLCVQATESCFLVERAVVGLIRLAIRLL
RREDISSQVLLSLRLLLMMKPHVLARVSREVAYGLHELLKTNAANIHCTDDWFTLFALIE
CIGAGIKPPASFKVTSTTPDIDTGAQSDSELSFHHLSEVSLDRGYTSDSEVYTEHGKSRM
PRSVTDVDVTSSGWLVVGKDDLDISKVAASGSKTLLNPLVNQYSLSLGQDMGFHDTKSLI
KCVESLSFIVRDAAHVTPENFELCVKAIRVFVEASLNGGYRTYEKKKNHKYDSQKSRVRR
KPRDKEGASRRAKASSQRPSRSHSDDEEDEGVPASYHTVSLQVSQDLLDLMHTLHTRASS
IYSSWAEEQRRLEPVGKKIEADSQTLWTSCWCPLLQGIAWLCCDARRLVRMQALTYLQRA
LLVHDLQTLDAVEWESCFNKVLFPLLTKLLDNISPADVCGMEETRMRACTLLSKVFLQHL
SPLLSLSTFAALWLTILDFMDKYMHAGSSDLLQEAIPESLKNMLLVMDTAGIFHSADSRT
GYSDLWEITWERIDCFLPNLREELFKQTVIPQPDPAPSPPVELVQPAAPCPPASPPPAQA
PSPVPVPASPTEPKTSSRPVSPQDPPPPSTNGTDRSSPVPPSTPPMPTPVKMSPQISSPL
IQSPTSQSPLILQPLASHLQVGGVPPMSLPIILNPALIEASCPVPLLPAPHPTEHSDTPQ
VK
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atgattattggtcatcactgttgggcagttagcttatcaattgaaattgcacaggactcc
atcttggaactcctaacaggtatcaggatggtggacaagaatatatacattgtccaaggg
gagatctgtactgttgtaggtgccatcaagaggaattcaaggtggaatacccatactcct
ttggatgaggaacaagatccattgcttaacagtttcagccacctgaaagagattctcaac
aatatgaaagagctgtcagatgtggagcccaacatattcctgcggcccttcctggaggtg
gtacgatctgaagacaccaccggaccaatcacaggcatggccctcacctctgtcaacaag
ttcctctcctacggcctcatagatgctaaccacgaggcggcggcggaggctatcgagaac
atggcggatgccgtcacacacgccagattcgtagggacggaccccgccagcgatgaagta
gtgctcatgaaaatcctacaggtcctgaggactttgctgctcacgcccgtaggagcccac
ctgaccaacgagtctgtgtgtgagatcatgcagtcgtgtttccgcatctgcttcgagatg
cgcctcagcgagctcctgaggaaatcagccgaacacacactggtggacatggtgcagctg
ctgttttccagactaccccagtttaaagaggaggccaaaagttttgtgggcgccaacatg
aagaagatcccatcctgtatcctgaacacacaggatcttatttgtacagagcagcctaaa
aacaccaatcagaggggcttagagaggctgaagatgcgtgctggtgggatgagtgagtcg
tcaaagtggaagaagcagaagcgctcgccccaccccccccgccacatggtgcgaagtgcc
tcgggcggattggagcaggcccctaccaccaccctcagcaacaacaacctctctggtggt
gtcccattcattgagcaggatagtttgtctgtctcagacagcgtggcctcctccatgtcc
atccccacagacagtggcctggacacctgctccaaggccacctccagagaggacctgaca
gacctggaccagagcagctctgccgccaccaccccttccacagagcctggacacctgtac
actcagtctgagggtaggcaggtggagcatgcccagtcggtggaatccatccctgaggtc
ctggaggacggagaatctgtgacggagcattcggactcagcctcattacatgacatggac
tatgtcaacccccgaggagtccgcttcacaccacagcaaacacagagagacggtgaggat
ggtgcggctctcatcccctactccctgccctgtctgcgggagctcttccgcttcctcatc
tcactgacgaacccccatgaccgccacaacacggatgccatgatgcacatgggcctgcag
ttgctgaccgtggctctggaggcggctcacatcgccccctaccagtcactgctgggcctg
gtcaaagacgagctctgcagacacctcttccagttgctaagtgtggaccgtatgaacctg
tatgccgcctccatccgagcgtgcttcttgctctttgagagcatgcgaggacatttgaag
tttcagctcgagatgtatctgaagaagctgatggacatcatcacgtcagagaacatgaag
atgccctatgagatgaaggagatggccctggaggccctggtgcagctttcgaggatcccc
agctttgtcaccgagctctacatcaatcatgactgtgacttctactgctcaaacctgttt
gaagacctcaccaagcttctctccaagaacgccttccctgtgtccggacagctctacaca
acccacctcctctcactagaggccctactcactgtgattgacagcactgaggcccactgc
caggccaaggtgctcaacagcaccactcagcaggaccactcagcagaaatggtgttggca
gaaggggagtgctcaaccaacgaccgtacagacacaaccacggaagcgagcaggcaggtg
tacagtgccaacggtcagaatgttccagaggctgacagtgtgcccctaccacctaccagc
gggcacctgatggcagagaagatgagactgggcagacaagaccaggaggagacagaacca
gctgaaaagaaagaaccaaaaaagccacgtcgcttctcgtcttgtttacctgattctcaa
gagctgttggacatcagaaataaaaagaagctgctgaacagcggcacagagcagttcaac
cagaagcctaagaagggcatccagttcctgcaggagaagggtctcctcagcagccccatg
gacaacaacgaggtggcccaatggctccgggagaacccccgccttgacaagaagcagatc
ggagagttcatcagtgaccgcaaatacatggagctactggacagcttcgtcaacacgttc
accttccgagggctgcgtattgacgaggcgctgcgtctgtatctggaggccttcagactg
ccaggagaggctccggtcatccatagacttttggaaaccttcacagacacctggcataaa
gtgaacggttctcccttcatgaccaacgacgcaggcttcgccctggcctatgctgtcatc
atgctcaacacggaccagcacaacaacaatgtgcgcaagcagaacatccccatgaccatt
gagcaattcaagaagaatctgaagggtgtgaatggaaatacagactttgatcaggatatg
ctggaggacatctacaatgcaatcaagaatgaagagatagtgatgccagacgagcagtct
ggcctggtgaaggagaactatgtatggaacgtgctgctccaccggggggccacctccgag
ggggtcttcctccatgtgcctgccggcagctacgaccacgacctgttcaccatgacctgg
gggcccaccatcgcagccctctcctacgtcttcgacaagagcctggacgacacaatcatc
cagaaggccattgctggctttaggaaatgtgccatgatatcagctcattatggattcagt
gatgtttttgataatttgatcatctccctctgcaagtttacaacgctcagcagtgagtcg
gtggagaacctgcccacagtgtttgggagtaacgggaaggcacagatagcggcgaaaacg
atgttccacctggcccaccggcacggtgacatcctgagggagggctggaaaaacataatg
gactccatgctgcagctgttcagagccgagctgctgcccaaggccatggtggaggtggag
gattttgtggagccaaatggaacgatttcccttcaaagagaagagacaccgtcaaatcgg
ggtgagtctgcggtgctgagctttgtgaactggctgacactgagtggagcggagcagtct
ggtcaacgtgggccctctactgagaaccaggaggccaagcaggcagccatgctctgtatc
aagcaatgtgacccagagaagctgatcacagagagtaaattcctgcagctggagtctcta
caggagctgatgaaggccctgatctcagtcacacctgatgaggagacgtatgatgaggag
gatgctgcgttctgcctggagatgctgctacgcatagtcatggagaacagggaccgtgtg
tcgtgtgtatggcagacggtgcgagatcacctgtgccacctgtgtgtccaggctacagag
agctgcttcctggtggagagggccgtggtgggcctcatcagactggccatccgcctgctg
cgcagagaggacatcagctcccaggtgctgctgtccctgcgtctcctgttgatgatgaaa
ccacacgtcctggcccgggttagccgggaggttgcctatggcctccatgagctgcttaag
accaacgctgccaacatccactgcacagacgactggttcacccttttcgccctaatcgag
tgcatcggtgccgggatcaaaccccccgcctccttcaaggtcacctccactaccccagac
atcgacacaggtgcccagtcggacagtgagctgtcgttccaccacctcagtgaggtgagt
ctggaccgggggtacacctcagactctgaggtctacacagagcatggaaagtccaggatg
ccccgctctgtcactgacgtggacgtgactagcagcggatggctggtggttgggaaagac
gacctggacatcagcaaggtagcggcttctgggtccaagaccctgctaaaccctctagtg
aaccagtacagcctgtccctgggtcaagacatgggtttccacgacaccaagtctctcatc
aagtgtgtggagtccctctccttcatagtacgagacgctgcacatgtcacccccgagaac
tttgagctgtgtgtcaaggccatccgggtgtttgtggaggccagcctaaacggaggctac
aggacctatgagaagaagaagaaccacaagtacgactcccagaagtcccgtgtgaggagg
aagccccgggacaaggagggtgcgtcccgccgcgccaaggcctccagccagaggccttcc
cgttcccatagcgatgacgaggaagacgagggggtccctgccagctaccacacggtgtca
ttacaggttagtcaggacctgttagatctgatgcacacgctgcatacgagggcctccagc
atctacagctcctgggcagaggagcagcgccgcctggagccagtagggaagaagattgag
gccgactcccagacactgtggaccagctgctggtgcccactgctccaagggatagcctgg
ctgtgctgcgacgccaggaggctggtgcgaatgcaggccctgacctacctccagagggca
ctgttggtccatgacctgcagacactagatgctgtggagtgggagtcctgttttaacaag
gtgctgttccccctgctgaccaagcttctggacaatattagccctgcagacgtgtgtggc
atggaggagaccaggatgagggcttgcaccctgctgtcaaaggtgttcctgcagcacctc
tctcccctgttgtctctgtccacctttgctgccctgtggctcactatcctggacttcatg
gacaagtacatgcacgctggctccagtgacctgctgcaggaggccatcccagagtctctg
aagaacatgctgctggtgatggacacagcaggaatcttccacagtgctgactctcgtacg
ggatactctgacctgtgggagatcacttgggaacgcatcgactgcttcctgcctaacctc
cgggaggagctcttcaaacagacagtcataccacaaccagatcctgctcctagtccccca
gtggagcttgtccaaccggctgccccctgccccccagcctcgccacccccagctcaggcc
ccatctcctgtgccagtgccagcttcccccacagagccaaagacctccagcagaccagtg
tcgccccaagatcccccaccacctagtaccaacggaacagacagatcatctccagtgcct
ccatcgactccccccatgcccaccccagtgaagatgtccccccagatctctagcccactg
atccagtcccccacgagtcaatcccccctcatcctgcagcccctggcctcccatctgcag
gtggggggcgtgccccctatgtccctccccattatcctcaaccccgccctcattgaggcc
agttgccctgtcccgctgctccccgccccccaccctactgaacatagtgacaccccgcag
gtcaaatag
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