Oncorhynchus kisutch (coho salmon): 109899707
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Entry
109899707 CDS
T09179
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X11
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109899707
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
109899707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
109899707
NCBI-ProteinID:
XP_020350744
Ensembl:
ENSOKIG00005044477
LinkDB
All DBs
Position
LG11:complement(39315433..39359110)
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AA seq
1976 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSGGPNSPTVKIKD
GQVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAYWSFPENEEDIRLYSCLANGS
PDEFQRGEQLYRMRAVKDPLQIGFHLSATVVSPQTGQSKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTEQCLTYEQIIGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDDMVVLWRLA
VLDPTMSPQRRLELASQLKQWHLKVIEIVKRGQHRKSLDKLFQGFKPAVESCYFNWEVAY
PLPGITYCSADKKSASFCWARAVQQQRGAKAGLAGDTSELGGGGGRSGSSEGGGGDYKGR
TPQQEVAVRPKETIVSKRKGLSAGGGGGVLVRLGGSVCLSLEEGSSKGMYKGAGSSSSIG
GKAKLAQGGKSSSGGSGGVGGKHQAAKRRTSSEDSSLEPDMAELSLDDGSSLALGAEASN
TFDFTPPPPEMLPSPSPLLREPHKYSGGGKGAGNMPKEHSFEVKRVTLAATLPVTESQPT
FPLKENATVVVEAAVALEKEVEVEAEMEVNGNKEVAPAGDARLSTSVAVVTVTAAAAKPP
RGGRRETGAVALPNQSPGAGGDPVGEDDYRAYYLNAASEEGAERVPENNHEEEPDIFAGI
KPLEQEGQMEVLFACAEALHAHGYSNEACRLAVELAGDLLANPPDLKVEQPQTKGKKSKV
STSRQTQVATNTLVKTSFLLTVLSERLELHNLAFSTGMFSLELQRPPASTKALEVKLAYQ
ESEVVALLKKIPLGLVEMTSIRDRAEQLRDGNFCDYRPVLPLMLASFIFDVLCTPVCTVV
SPTGSRPPSRNRNNEMPGDEELGFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALAL
MITYKDDQSKLKKILDKLLDRESQTHKPQTLSSFYSSKPAASSQRSPSKHAAHNAHGHGA
ATGGVSKHAPNATAAAGSSSVQAVAAGGAAGQLAGSGVQNNATPGDGVSEAREQADGAQP
ASCDQPSESVPFKPEGTVPSRLALGGRGAYSGRCWGSPVRQKKKHTGMASIDSSAPETTS
DSSPTLSRRPLRGGWAAASWGRGQDSDSISSSSSDSLGSSSSSGSRRAGGGARAKSTDTS
RYKGRRPECHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTQPSASGGHQGPHR
NLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILVECWDGHLT
PPEVASLADRASRARDPNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQVHVRYSSV
LQKTHRTTHDNVMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGGSGAQREG
PVRCRANGGAGRRPPETGHGVTDNSGNMESSGVATVTASVTAAAVVPVISVGSTIYQSHA
LPGSAMAHPHSQGLHPYTTIQAHLPTVCTPQYLGHPLQHVPRPTVFPLSGGAYPQCVCVP
SQGMHPAFIGAQYPFSVATGPHPPMAATAVTFPGIPVPSMTQIAVHPYHTETGLPLSTTV
AGATTFSSFYPVGGVHSGATIQAIQGSSLPGMSSQPVSLVSAPFPSEDEQHSQPISQQGL
HYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTEDVKWLLGLAARLGVNYVYQFCVG
AAKGVLSPFVLQEIIMEALQRLNPAHIHAHLRTPAFHQLVQRCQQAYLQYIHHRLIHLTP
ADYDDFVNIIRSARGAFCLTPVGMMQFNDVLQNLKRGKQTKELWQRISLEMATFSP
NT seq
5931 nt
NT seq
+upstream
nt +downstream
nt
atggaactaatgttcgccgagtgggaagacggagaaaggttctccttcgaagattctgac
cggttcgaggaggactcgctctgctccttcatatcagaagctgagagtctgtgtcagaac
tggaggggatggagaaaacagtctgggggaccaaattctcctacagttaagattaaagat
ggtcaggtcatccctctggtggagctttcagccaagcaggtggcattccatatcccgttt
gaggtggtggagaaggtctatcctcctgtccctgagcagctgcagctacgcatcgcctac
tggagcttccctgagaacgaggaggacatccggctgtactcgtgtctggccaacggcagc
ccagatgagttccagcgaggggagcagctgtacaggatgagggctgttaaagaccctctg
cagataggtttccacctcagtgccaccgtggtatcgccacagactggccaatcaaaaggg
gcgtacaatgtggctgtcatgtttgaccgctgccgcattacctcctgcagttgcacctgc
ggggccggggccaagtggtgcgcccacgtggtggccctctgcctcttcaggatccacaac
gcgtctgcagtgtgcctgcgagcccctgtttcagagtccctgtcccggctgcagagggac
cagctgcagaagtttgcccagtacctaatcagtgagcttccccaacagattttgcccaca
gcccagaggctcctggatgagctcctgtcctcccagtccacagccatcaacacagtgtgt
ggggctccagaccccactgctggcccctcggcctctgaccagagcacttggtatctagat
gagtccacgctcagtgacaacatcaagaagacgctgcacaagttctgtggcccctctcct
gtggtcttcagtgacgtcaactccatgtacctgtcatccacggagccaccggctgcggca
gagtgggcatgtctgctgagacctctgagggggcgggagcctgaggggatctggaacctc
ctgtctatcgtcagggagatgttcaagaggagggacagcaacgctgcacctctactagag
atcctcacagagcagtgtctcacttatgaacagattattggctggtggtacagcgtgcgt
acgtcggcgtcccacagcagtgccagcgggcacacggggcgcagtaacgggcagtcggag
gtggcagcccacgcctgcgccagcatgtgtgatgacatggtggttctgtggaggctggct
gtgctagaccctaccatgagccctcagaggcgtttggagctggcctcccagctcaagcag
tggcatctgaaagtgattgagattgtgaagcgagggcaacatcgcaagtccctggacaaa
ctgttccagggcttcaagccagccgtggagtcctgctacttcaactgggaggtggcctac
ccactgccaggcatcacctactgcagtgctgacaagaagagcgcctccttctgctgggcc
agggcagtgcagcagcagagaggggccaaggctggcctggctggagacacctctgaactt
ggaggaggaggggggagatctggcagctctgagggaggtgggggagactacaagggcaga
actccccaacaagaagtggctgtcaggcccaaagagaccattgtgagcaagaggaagggg
ttgtcggccgggggcggaggaggggtcctagtgcggctagggggcagtgtctgtctttct
ctagaggagggcagtagtaaggggatgtacaaaggcgcaggttcctcctcgtccattggg
ggcaaggctaagctggcccagggggggaagtcgtcctccgggggatcaggaggggtaggg
ggaaaacaccaagcggccaagcggcgcaccagcagtgaggacagctccctggagcctgac
atggccgagctgagcctggatgatggctccagtctggcgctgggcgccgaggccagtaac
acctttgacttcacacccccgccacccgagatgctaccctcaccaagcccactactcaga
gagccacacaaatacagtgggggagggaaaggggccggaaacatgcccaaggagcactcc
ttcgaggtcaaacgtgtcactcttgctgccaccctgcctgtcactgagtcccagcccacc
ttccccctcaaggagaacgccactgtcgttgtggaagcggctgttgccttggagaaggag
gtggaagtggaggcagagatggaggtgaatggaaataaggaggtggcccccgctggagac
gctcggctctccacctcggtcgctgttgttaccgtgactgctgctgccgccaagccaccg
cgtggtgggcgccgagaaactggcgctgtagccctgcccaatcagagcccaggggcaggg
ggagaccctgttggtgaggatgactaccgggcctactacctaaatgcagcctctgaggag
ggggcagagagagtgccagagaacaaccatgaggaggaaccagacatctttgctgggatc
aagccactggagcaggagggccagatggaggtgctgtttgcatgtgcagaggccctccac
gcccatggctacagcaacgaggcctgtagactggcagtggagctggctggagacctgctg
gccaaccctccagacctgaaggtggagcagccccagacgaagggtaagaagagcaaggtg
tccaccagcaggcagacccaggtggccaccaacaccctggtcaagacctccttcctgctg
acggtgctgagcgagaggctggagctccacaacctggccttcagcacgggcatgttctcc
ctggagctgcagaggcccccagcctccaccaaggccctggaggtcaagctggcctaccag
gagtcagaggtggtggctctgctgaagaagatccctctgggcctggtggagatgacgtcc
atacgggacagggccgagcagctccgagacgggaacttctgtgactacaggcctgtcctg
cccctcatgctggccagcttcatatttgatgtgctgtgtaccccagtttgtacagttgtc
tcccccacagggtcccgtcctcccagccgtaaccggaacaacgagatgcctggagacgag
gagctgggctttgaggctgctgtcgcagcactgggtatgaagaccacagtgagcgaggca
gagcaccctttgctgtgtgaggggaccaggagagagaaaggagacttggctctggctctt
atgatcacatacaaggatgaccagagcaagctgaaaaagatcctggacaagctgctggac
agagagagccagacccacaagccccaaaccctgagttccttctactccagcaagccagct
gccagcagccagaggagcccatccaagcacgctgcccacaatgctcacggacacggagcg
gccaccggaggggtgtccaaacacgccccaaacgccacggctgcagctgggtcctcctct
gtgcaagcggtggctgctggtggggcagcaggacaactggcgggcagcggggtgcagaac
aacgccacacccggagatggcgtcagtgaggccagagaacaagcagatggcgcccagcct
gcatcatgtgaccagccgagtgagtcggtcccattcaagcccgagggcactgtgcctagt
cgcttggcgctgggaggacggggggcatacagcgggcgctgctggggctctcctgtccgc
cagaagaagaaacacacaggcatggcgagtatcgacagcagtgctcctgagaccacctca
gacagctcccccaccctcagccgacgtccactcagagggggctgggctgcggcctcctgg
gggaggggccaggacagtgacagcatcagcagctcttcctctgattcactgggctcctcc
tcatccagtggctctcgcagggccggagggggagctagggcaaagagtacagacaccagc
aggtataaagggcgtcgtcccgagtgccatgcaccccatgtgcccaaccagccatcagag
gcggcggctcacttctactttgagctggccaagacggtgctgatcaaggccgggggcaac
agctccacctccatcttcacccagccctcagccagcgggggccaccagggtccccaccgc
aacttgcacctctgtgccttcgagattggcctgtacgccctgggcctgcacaactttgtc
tcgcccaactggctatccaggacctactcctcccacgtctcctggatcacaggccaggcc
atggagattggcagtgctgccctcaacatcctggtggaatgctgggacgggcacctcacc
cctcccgaggtggcctcactggcagacagggcatcacgggcgcgggaccccaacatggtt
cgcgctgcggccgagctggccctgagctgcctgccccatgcacacgccctcaaccccaat
gagatccagagggccctggtgcagtgcaaggaacaggtacatgtccggtactcttcagtt
ctgcagaagacacatcggactactcatgacaatgtgatgctagagaaagcctgtatggct
gtagaggaggcagccaaggggggcggtgtgtaccctgaggttctgtttgaggtggcccac
cagtggtactggctctatgagcagacagtaggagggggatcaggggcccagcgcgagggc
ccggtacgctgcagggccaacggtggagctgggagaaggcccccggagactggtcacggt
gtgacggacaacagtggcaacatggaatcctctggtgttgccacagtgactgcctctgtg
acagcagcggctgtggtgcccgtcatctctgtgggctccaccatctaccaatcacacgcc
cttcctggctctgccatggcccacccccactcccagggcctgcatccctacactaccatc
caggcccacctgcccactgtctgcaccccccagtacctggggcacccgcttcagcacgtc
ccccggcccactgttttccccttgtcagggggtgcatacccacagtgtgtatgtgtgccc
tcccagggaatgcacccggcctttatcggtgcccagtacccgttctcagtggccaccggc
ccccatccgcccatggcagcaactgcggtcaccttccctggtattcccgtgccgtccatg
acccagatcgccgtccacccgtaccacactgagaccggcctgcctctgagcaccactgta
gcaggagccacgactttttcctctttctatccagtaggtggcgtccattcaggcgccaca
atccaggccattcaggggtcatctcttcctggtatgtcttcccagcccgtctcattggtc
agcgcccccttcccgtctgaagacgagcagcatagccagccaatcagccagcagggtctt
cactacctgcactcagcttacagagttggcatgctggctttggagatgcttggaaggagg
gctcacaacgaccaccccaataacttctcccgcagccccccatacacggaggatgtcaag
tggctcctgggcctggctgcacggctaggtgtgaactacgtgtaccagttctgtgtgggt
gcggctaagggtgtgctcagccccttcgtccttcaggagatcatcatggaggctctccag
agactcaaccccgcccacatccatgcccacctccgcacgcccgccttccatcagcttgtg
cagcgctgccagcaggcctatctacagtacatccaccaccggctgatccacctgaccccg
gccgactacgacgactttgtcaacatcatccgcagtgcccgcggggccttctgtttgacc
cctgtgggaatgatgcagttcaacgacgtgcttcagaacctgaagaggggcaagcagacc
aaggagctgtggcagcgcatctctctggagatggccaccttctccccatga
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