Oncorhynchus kisutch (coho salmon): 109899727
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Entry
109899727 CDS
T09179
Name
(RefSeq) VPS10 domain-containing receptor SorCS3 isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109899727
Membrane trafficking [BR:
oki04131
]
Endocytosis
Others
Others
109899727
Endosome - Lysosome transport
109899727
Endosome - Golgi transport
109899727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
DUF6085
GBP_PSP
Motif
Other DBs
NCBI-GeneID:
109899727
NCBI-ProteinID:
XP_020350784
Ensembl:
ENSOKIG00005046358
UniProt:
A0A8C7KMK0
LinkDB
All DBs
Position
LG11:complement(35966628..36031532)
Genome browser
AA seq
1244 aa
AA seq
DB search
MVISGSVWCWAILTCVLSYFYNMLTAYAEINWPASSTTTNVWLNRVDTLPLELRTNLKSV
WVKIPKDIVKESAFSRAFQMEPIDGKPAVPKGGGRLPKDLKRVMGKVTPDAISSGRYKTA
PNRSKYFTDDRKKSDRFFDVNDGTLALSNRTKRSTAYGEYSDRSQIGGPGDAFSAEKLLE
PFGVYSPRTEYRRTGEDARTGPRQSESLLVTSTFPLSGDSAHNQAMGHWVGDNSSVILTL
TKQYDFNLGAFTESSLWRSVDYGSTYIKLNNKVGSTLACLYVCPTNKRKIMMLSDPELEH
SVLISSDEGASFEKHPINFYMDGLLFHPTQENWLLASSPDNKVYSTMDFGRKWQLVSENV
TPGRFFWAQTGLDREADMVHMETHISKGRAQYVTCRAQRCTESNRQYLFPGHIDQNSLVV
QDNYVFVQVTKSGQASYFVSYMRESFKQIQLPKYCLPKDMHIISTDKKQVFAAVQEWNQN
DTYSLYISDSPGVYFTLSLENLRTRREPGGNVLVDMYKVEGINGIFFTNKLVDHEVKTFI
TYNKGQTWALLQAPNTDVAGNSLHCILPFCSLHLHLDMPVNPYLPGRIFSKDSAPGIIVA
TGNIGTELSSTSLGMFITSDAGNSWRQIFEEELGVWFLDNGGALVAVSLVATVPIRHIWI
SLDEGKKWDRHSFSLVPLFLDGALMQPENHIITFTGHLSRISEWQLIKIDYKAIFGRRCM
DGDYQTWNLHNKGEPCVMGEKQTFMKRRPGNRCMLTQDYSRVISSEPCICRAYDFECDYG
YERQADGNCSPAFWFDPNTVPRSCSTSQNYLNSTGYRKVLSNNCKEGGKDVYSPRKQHCS
PRPPRGLRLTTSHGDLTANLGSNITFLVHLDDGNSLWTHIQLDFGDGITVMYNLSRRGDG
IKHSYRAPGIFRVTAHAENSQGYDSSSMFLHITSPVERVYLSAPIVAIRKKEANLTAVVW
PVHQRTLTFFWWFENSSESLITLGGSIAYTFQKEGMNRVIVQVSSGCNILQDTKVIIVKE
FFKSLLLSFSPTLDEHNPDIPEWREDVGRVVRTAVSQVSGFPEEQLLVSLFPGVPTTAEL
FILPETQLSEHGKGNEEGLVSISDILINALNQGLIQFELKPDTQIIVYITQLTSAPLVDS
NPIHSSSAMLMSLSVAFVGLVAFFIFKFKRKIPWIHVQAEENQEKEPERIGTVRQNNTMS
KMKHSEFPSEKELTEKELEARTRGEDGRNGERVITREFPTCTNV
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggtcatctcaggttcagtttggtgttgggctattttgacttgcgttttaagctatttt
tacaatatgttgacagcatacgctgaaataaattggccagcgagttccacgacgacgaac
gtttggcttaaccgtgttgatacattgcctttggagctgcgcacaaacctaaaatccgta
tgggtcaaaatcccaaaggatatcgtcaaggaatctgccttttccagagcttttcaaatg
gaaccaattgatggaaaaccggcggttccaaaaggtggagggagattaccaaaggacttg
aaaagagttatggggaaagtgacacctgatgctatatcttctggcagatataaaactgcg
ccaaaccgttccaagtattttactgatgacagaaaaaagtcggaccgtttttttgacgta
aatgacggcacacttgctttaagtaaccgtacaaagcgaagtacagcctacggcgaatat
tcggacaggagtcaaattggaggtcctggtgacgcattttcagccgagaagcttttggag
ccttttggtgtttatagtccgaggacagaataccgacgaactggggaggacgcaagaact
ggtccgaggcaaagtgagtcgcttctggtcacctctactttccctctatccggagactct
gcgcacaaccaggcgatggggcactgggttggagacaacagcagcgtgatcctgaccttg
acgaagcagtatgactttaacttgggtgctttcactgagagttctctctggagatcagtg
gactatgggagcacttatattaaactgaataataaggttgggtcaaccttggcttgcctc
tacgtctgcccaaccaacaagagaaagataatgatgcttagcgacccagagctggaacac
agtgtactcatcagctcagatgaaggtgccagcttcgagaagcatcccattaacttctac
atggacggtctgctgtttcatccaacacaggaaaactggctgctggctagcagtcctgac
aacaaggtgtacagcacaatggactttggaagaaaatggcagttggttagtgagaatgtg
actcctggacggttcttctgggcacaaacgggactggacagagaggcagatatggtccac
atggagacccacatctccaaaggacgtgctcagtatgttacgtgccgagctcaacgatgc
acagaatcaaacagacagtacctgttcccgggacacatagaccaaaattctctggttgtt
caggacaactatgtgttcgttcaggttaccaagtcagggcaggcgagttactttgtgtcc
tatatgagggaatcattcaaacaaattcaactccccaaatactgtcttcccaaggacatg
cacatcatcagtacagataagaagcaggtgtttgcggctgtacaggagtggaaccagaat
gacacctacagcctgtatatctcagactctccaggggtctacttcactctgtctctagag
aacctccggaccagaagagagccaggtggaaatgtactggttgacatgtataaggtagaa
ggaataaacggcatattttttaccaacaaattggtggaccatgaagtgaagactttcatt
acctataacaagggtcagacctgggcccttctgcaagcccctaacactgatgtggctgga
aacagtctgcactgcatcctgccattttgttctctgcatctgcacctggatatgcctgtg
aacccttacctgcctggacgcatcttcagtaaggactcagcaccagggatcatcgtagcc
acaggcaacattggtacagagctgtcctccacgagccttggaatgtttataacatctgat
gctggcaatagctggagacagatatttgaagaagaacttggtgtttggtttcttgacaat
ggaggtgctttagttgcagtgtctttagttgcaacagtacccatccggcacatatggata
agtctggacgagggtaagaaatgggatcgtcacagtttctctctggttcctttgtttctg
gatggagctcttatgcaaccagagaatcacatcatcactttcactggacacttaagtcgt
atttcagaatggcagctgataaagattgactacaaagccatctttggcaggagatgcatg
gacggagattatcagacttggaacctacataacaagggagagccatgtgtgatgggagaa
aagcagacctttatgaaacggaggccagggaaccgctgtatgctgacccaggactactcc
cgagtcatatcctcagaaccatgcatctgcagggcctatgattttgaatgtgattatggg
tatgaacgtcaagctgatggaaactgttcacctgctttttggttcgacccaaatacggta
ccaagaagctgtagcactagccagaattacctcaatagcacagggtacaggaaggttttg
tctaataactgcaaagagggaggaaaggatgtgtactcccccaggaaacagcattgttcc
cccaggcctcccagaggcctcagactgaccaccagtcatggagacctcaccgccaacctg
ggcagtaacatcaccttcctggtgcatctggacgatggaaactcgttgtggacacatatc
cagctagactttggggatggcatcacggtcatgtacaacctgagccggagaggcgatggg
atcaaacacagctatagagcacctgggatcttcagagtgacagcacatgctgagaacagc
cagggatatgacagcagctccatgttcttacatatcaccagcccagtggagcgtgtgtat
ctctcagctcctattgtggccatcaggaagaaggaagccaacctaactgctgtggtctgg
cccgtccaccaaagaacactaacctttttctggtggtttgaaaacagctctgagtcctta
ataaccttgggtggaagcatcgcgtacacgtttcagaaggagggcatgaacagggtcatt
gtccaggtgtcttctgggtgcaacatactgcaggataccaaggtcatcattgttaaagag
ttcttcaaatccctgctgttatcattctctccgactttggacgagcacaaccctgacatc
cctgagtggagagaggatgtgggccgtgtggtgaggacagctgtgtcacaggtgtctggg
tttccagaagagcagctgttggtatcgttgtttccaggtgttccaacaacagcagaacta
tttatcctgcctgagactcagttgtccgaacatgggaaagggaatgaagagggcttagtg
agtatatcagacattcttataaatgctctgaaccaaggattgatccagtttgagttgaaa
cctgacactcaaataattgtttacatcacacagctaacttcggcacctctggttgattcc
aacccaattcacagtagctcagccatgctgatgtcgctatctgtggcgtttgttggttta
gttgcattcttcatcttcaagttcaaaaggaaaatcccttggatccatgtccaggctgag
gagaaccaggaaaaggagccggagaggatcggcacggttaggcagaacaacaccatgtcc
aagatgaaacacagtgagttcccctcagagaaggaacttacagagaaagaactggaggcc
aggaccagaggagaagatggaagaaatggggagagagtgatcacaagagagtttcctact
tgtactaatgtctaa
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