Oncorhynchus kisutch (coho salmon): 109899731
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Entry
109899731 CDS
T09179
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03015
mRNA surveillance pathway
oki04261
Adrenergic signaling in cardiomyocytes
oki04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109899731
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109899731
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
109899731
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oki01009
]
109899731
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109899731
03036 Chromosome and associated proteins [BR:
oki03036
]
109899731
Protein phosphatases and associated proteins [BR:
oki01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
109899731
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
109899731
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
109899731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Y_phosphatase2
DUF6816
Motif
Other DBs
NCBI-GeneID:
109899731
NCBI-ProteinID:
XP_020350792
Ensembl:
ENSOKIG00005045761
LinkDB
All DBs
Position
LG11:35696469..35702908
Genome browser
AA seq
450 aa
AA seq
DB search
MAGVAGGNDFQWCFSQVKGAIDEDVAEADIISTVEFNHSGEFLATGDKGGRVVIFQHEQE
VHFCKNRPHLRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNSAHFLLSTNDK
TIKLWKISERDKRAEGYNLKDEDGRLRDPFRITSLRVPVLMPMDLMVEASPRRVFANAHT
YHINSISVNSDHQTYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAECQPN
QCNVFVYSSSKGTIRLCDMRAAALCDRHTKFFEEPEDPSSRSFFSEIISSISDVKFSHSG
RYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSAI
MTGSYNNFFRMFDRNTRKDITLEASRESSKPRGTLKPRKVSTGGKRKKDEISVDSLDFNK
KILHTAWHPKENVIAVAATNNLYIFQDKIN
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagttgccggtggaaatgactttcagtggtgtttctcacaagtgaagggggca
atagatgaagatgttgcggaagcggatatcatctcaacggttgaattcaaccattctgga
gagtttctagcaactggagacaagggaggcagagttgtcatatttcaacatgaacaggag
gtgcatttttgtaaaaatagaccacacctgcgaggggaatacaacgtctatagcacattt
cagagtcacgaacctgaatttgactacttgaaaagtttagaaattgaggaaaaaattaac
aaaataagatggttaccccaacaaaactctgctcactttctgctctcaacaaatgataaa
actatcaaattgtggaagatcagtgaacgagacaagcgggctgagggttacaacttgaaa
gacgaagatggacgtctcagggatccctttagaattacctccctgcgggtaccagtgctg
atgcccatggatctcatggtagaagcaagtcctcggagggtgtttgccaacgctcataca
tatcatattaattccatttctgtaaatagcgatcatcaaacgtacctctccgctgatgac
ctaagaattaacctatggcacttggaaatcactgacagaagctttaacattgtagacatc
aagcctgccaacatggaggaactgacagaggtgatcacagctgctgagtgccaaccaaac
caatgcaatgtatttgtgtacagcagtagcaaaggcaccatacgcctctgtgacatgcga
gcagcagcactctgcgataggcacactaagttctttgaggagcctgaggatccaagcagc
aggtcgttcttctctgagatcatctcgtccatttctgacgtgaagttcagtcacagtggg
cgctacatgatgacacgggactacctctccgtcaaggtgtgggacctcaacatggagaac
aggccagtcgagacatatcaggttcacgaataccttcgcagcaagctctgttcattgtat
gaaaatgactgcatctttgacaagtttgagtgctgctggaacggtagcgacagtgcaatc
atgactggctcctacaacaacttcttccggatgtttgaccgcaacaccaggaaggacatt
acactggaggcctccagggagagcagcaaaccgcgtggcacactcaaaccccgcaaagtc
tccactggaggcaagaggaagaaagacgaaattagcgtggacagcctggatttcaacaag
aagatcctgcacactgcctggcaccccaaagaaaatgtcatcgctgtggcagccaccaac
aacctgtacattttccaggataagatcaactaa
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