Oncorhynchus kisutch (coho salmon): 109899773
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Entry
109899773 CDS
T09179
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109899773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109899773
03016 Transfer RNA biogenesis [BR:
oki03016
]
109899773
Enzymes [BR:
oki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
109899773
Messenger RNA biogenesis [BR:
oki03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
109899773
Transfer RNA biogenesis [BR:
oki03016
]
Prokaryotic type
tRNA degradation factors
109899773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KRR1-like_KH2
Motif
Other DBs
NCBI-GeneID:
109899773
NCBI-ProteinID:
XP_020350879
Ensembl:
ENSOKIG00005017481
LinkDB
All DBs
Position
LG11:29803518..29812159
Genome browser
AA seq
779 aa
AA seq
DB search
MCNVSFYLNMRHLLRLGPSLARLNVRLCHQSVWNSHGTIRKVGVDFGGKKLEISTGKLAR
FADGSAVVQLGDTTVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNHLRRELGTTE
NEILTSRLIDRAIRPLFPAGYFYDTQVLCNLLAVDGVNDPDVLAINGASAALSLSDIPWN
GPIGAVRIGLVNGEFLVNPTRKEMASSTINLIVAGAPLSQVVMIEASAENVLQQDFCHAV
KVGVKHTQQIILAIQQMAREAKVSKRTPPKIFSAPLEMIELARQLASEKVYAVFTDFTHD
KISRDDAINKVRLETEEQIKEKYPQAEPYEVMESFNMVSKEVFRNLVLNEYRRCDGRDLT
SLRNISCEADIFKPLHGSALFQRGQTQVLCSVTFDSLESSIKTDIITTALSGVKDKNFML
HYEFPPYATNEIGKMSGMNRRELGHGALAEKSLRPVIPKDFPFTIRVTSEVLESNGSSSM
ASACGGSLALMDAGVPISSAVAGVAIGLISKANPEKPSEIQDYRILTDILGIEDYLGDMD
FKLAGTNKGINALQADVKIPGLPLKLVMEAIQQATVAKREILGIMNKTIAKPRDKRKENG
PVVENVRVPVSRRARFVGPGGYNLRRLQAQTGVTISQVDEETFSVFAPTPGAMNEAQEFI
TEICKDDQEQLLEFGAVYTATIMEIRDIGVMVKLYPNMSAVLLHNSQLDHKRIKHPSALG
LEVGQQIQVKYFGRDPTDGRMRLSRKVLQSPAATVVKTMSEKQSISMGTGNGQATSTSS
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaatgttagcttttacttgaatatgagacatttactgagacttgggccctcgctg
gctcgactaaatgtgcggttgtgccaccaaagcgtctggaacagtcatggaacgatacga
aaagtgggagtggacttcggagggaaaaaactagagatctcaacagggaaacttgccaga
tttgcagatgggtcggctgttgtgcagcttggggatacaacagtgatggtgacagctgtc
agtaaaacaaaaccgtccccctcccaatttatgcctctagtggtggactacaggcaaaaa
gcagctgctgctggtagaatccccactaaccacctgcggcgggagttgggcaccactgaa
aatgagattctgactagtaggctaatagacagggcaatcagaccgctttttccagctggt
tatttctatgacactcaggtcctgtgtaatctgttggcagttgatggtgttaatgatcca
gatgtactggccattaatggagcctctgctgctctatccttgtctgacattccttggaat
gggcccattggtgcagtgcgcattggtctggtgaatggagagtttctggtgaatccaaca
cgaaaggaaatggcttccagcactatcaacctgatagtggcaggagcaccgctcagccaa
gtggtgatgatagaggcttctgctgagaatgtgttgcagcaggacttctgtcatgcagtc
aaggttggtgtgaagcacacacagcagatcatactggcaattcagcagatggccagagaa
gcaaaggtgtctaagcgcactcctcccaaaatattttctgctcccctggaaatgattgag
cttgcgcgacagttggcctctgaaaaggtctatgctgttttcacagacttcactcatgac
aaaatttccagagatgatgccattaataaagtaaggcttgaaacagaggaacaaataaaa
gagaaatatcctcaagcagaaccttacgaggtgatggagtccttcaacatggtatcaaaa
gaggttttccgcaatctggttttgaatgagtacaggaggtgtgatggaagagacttgact
tctttgagaaatatttcctgtgaggcggacatctttaagccccttcatgggtctgcactt
ttccagaggggacagacacaggttctgtgctctgtaacatttgactccttggagtctagt
attaaaacagacatcattactacggcgttaagtggagtcaaagacaagaatttcatgctt
cactatgagtttccaccttatgcaaccaatgaaattggaaagatgagtggaatgaacaga
agagagcttggtcatggggcactggctgagaagtctttgagacctgtcattcccaaagac
ttccccttcacaattagagttacctctgaggttctggagtctaatgggtcctcgtctatg
gcatcagcatgtggaggcagtctggctttgatggatgctggtgttcctatttcatcagct
gtggcaggtgtcgctattggacttatatccaaggcaaacccagagaagccatcagaaatc
caggattaccgaatattgactgatattctgggaatagaggattacctaggagacatggac
ttcaaactggcaggaacaaacaagggtatcaatgccttacaggctgatgtgaagattcca
ggcttacctctgaaacttgtaatggaggctattcagcaagccacagttgccaagagggag
attttgggcatcatgaacaagaccattgccaagccaagggataaaagaaaggagaatggc
ccagttgtcgaaaatgtcagagtccctgtctccagacgagcacgctttgtcggaccaggg
ggatataacctccgcagactacaagctcaaacaggtgtgacgataagccaggtggacgag
gagaccttctctgtgtttgcacctactccaggtgcaatgaatgaagcccaggaattcatc
acagaaatctgcaaggatgatcaagagcagctactggagtttggtgctgtttacactgcc
accatcatggaaataagggacattggtgtcatggtgaagctatatcccaacatgagtgct
gttctgctccataactctcagctggaccacaaacggataaaacacccaagtgctcttgga
ttagaggttggacagcagattcaggttaaatactttgggagagacccaacagatggtaga
atgaggctttcgaggaaggtgttacaatctccagcagcaacagttgttaagaccatgagt
gagaaacagagcatctccatgggcacagggaatggccaagcgaccagcacctcctcttga
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