Oncorhynchus kisutch (coho salmon): 109899775
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Entry
109899775 CDS
T09179
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-like
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03010
Ribosome
oki04120
Ubiquitin mediated proteolysis
oki04137
Mitophagy - animal
oki04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
109899775
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109899775
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109899775
04137 Mitophagy - animal
109899775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
oki03011
]
109899775
04121 Ubiquitin system [BR:
oki04121
]
109899775
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109899775
Ribosome [BR:
oki03011
]
Ribosomal proteins
Eukaryotes
Small subunit
109899775
Archaea
109899775
Ubiquitin system [BR:
oki04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
109899775
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109899775
Exosomal proteins of colorectal cancer cells
109899775
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
IBR
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
109899775
NCBI-ProteinID:
XP_020350884
LinkDB
All DBs
Position
LG11:29677969..29683808
Genome browser
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPAEECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtcaaaaccctcacggggaagactataaccctcgaggttgagccttca
gacaccattgaaaatgtcaaggccaaaatccaagacaaagaaggtatccctcccgatcag
cagaggttgatcttcgctggtaagcagctggaggatggacgcacactgtccgactacaac
attcagaaggagtccactctgcatttggtgctgagactgcgtgggggtgccaagaagagg
aagaagaagtcctacaccactcccaaaaagaacaagcacaagcggaagaaggtcaagctc
gcagtgctcaagtactacaaggttgatgaaaatggcaagatccaccgtctgcgtcgtgag
tgtccagctgaagagtgtggtgctggtgtgttcatggccagccactttgataggcactat
tgtggcaagtgctgcctcacttactgcttcaacaagccagaggacaagtaa
DBGET
integrated database retrieval system
