Oncorhynchus kisutch (coho salmon): 109899813
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Entry
109899813 CDS
T09179
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
109899813
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109899813
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
109899813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
109899813
NCBI-ProteinID:
XP_031691386
Ensembl:
ENSOKIG00005005490
LinkDB
All DBs
Position
LG11:26120436..26397895
Genome browser
AA seq
1239 aa
AA seq
DB search
MLAEPDATVLHGSGNSMMSRNIYHNKNQDSSISISKMDVIIPFSPDVPCDNNGQRMWWAF
LASSMVTFFGGLFIILLWRTLKYLWTVCCHCNTKKKEAQKVNNPANSQAADGTPKGPDEK
DEVVPASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQ
NFYKDFTLQIDMFFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRS
WLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDP
WENFQNSQSLSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEI
IELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNIS
PNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCPDPDAEDASNIM
RVISIKNYSPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQG
LSTMLANLFSMRSFIEIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPAVCELCYVKLK
LLLIAIENKSELGESRSRKRILINPGNHVKMQEGTLGFFIASDAKEVKRAFFYCKACHDD
ITDPKRIKKCGCKRLIYFEDEHPSTLSPKKKQRNGGMRNSPNNSPKMMSRHDPLLIPGNE
QMENMDMNVKQYDSTGMFHWCPSKEIEKVILTRSEASMTVLSGHVVVCIFGDVTSALVGL
RNLVMPLRASNFHYHELKPIVFVGSLEYLRREWETLHNFPKVSILPGTPLSRADLRAVNI
NLCDMCVILSANQNNIDDASLQDKECILASLNIKSMQFDDSIGLLQANSQGFTPPGMDRS
SPDSSPVHGLVRQASVTTGANIPIITELAKPGKILPLVSFSQEKNCGINIQMITELVNDS
NVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGAT
PELEALLAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKT
YNMLCFGIYRLRDAHLATPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASL
SHSSHSSHSSSKKSSSVHSIPTTNRQNRSSKAREAGHKQNATRMNRMSQERKWFTDEPEN
AYPRNIQIKPMSTHMANQINQYKSTSSLIPPIREVEDEC
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgagccggatgccaccgttctccatggaagcggcaactctatgatgagtaga
aatatctatcataataaaaatcaggactcctcgatctctatatccaagatggacgtgatc
atccccttctcgccagacgtgccctgcgacaataatggccaacgcatgtggtgggcattc
ctcgcctcctctatggtgacgtttttcgggggtctcttcatcattctcctttggaggacc
cttaaatacctgtggaccgtgtgctgccactgcaacaccaaaaagaaggaggcccagaag
gtgaataaccctgctaacagtcaggcagcagatgggacacctaagggtcctgatgagaag
gacgaagtggtacctgccagcgaggtggggtggatgacctctgtgaaggactgggccggg
gtcatgatatcagcacagacactcaccggcagagtcctggtcgtgctcgtctttgctctc
agcattggagcacttggaatatactttatagactcttctgatcccatagaatcctgtcag
aatttctacaaagatttcacgttacagatcgacatgttcttcaatgtcttcttcctcctc
tactttgggctgcggttcatagcagccaatgataagctgtggttctggctggaggtcaac
tcagtggtggacttcttcactgttcctcctgtcttcgtatcggtctacttgaataggagc
tggctgggcttaagattcctgagagccttgagattgatacagttctcagaaattttacag
tttttgaatatcttaaaaacaagcaattccatcaagctggtgaacctgtgttccatcttc
ataagcacatggctaacagctgccggattcatacatttggtggaaaactcaggggatcct
tgggaaaacttccaaaattcccagtcactttcctattgggaatgtgtctacttgctcatg
gtcactatgtcaacagtgggctacggggatgtctatgcaaaaaccaccctgggacgcctg
ttcatggtcttcttcatccttgggggtttggccatgtttgccagctacgtccctgaaatc
atagagttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggaga
aagcacattgtggtctgtggtcatataacgctcgaaagtgtctccaacttcctcaaagac
ttcctacacaaggacagggatgatgtcaatgtagaaatagtttttctccataatatttcc
cctaatcttgagctggaagccttgttcaaacgccactttacccaagtggagttctaccag
ggatctgttctcaaccctcacgatctggcccgagtgaagattgagtcagcagacgcctgt
ctgattctggctaataaatactgtcctgatcccgatgctgaagatgcctccaacatcatg
agggtcatctctatcaagaactattcccccaagatacgaattatcactcaaatgttacaa
taccataacaaggctcacctgctcaacattcctagctggaactggaaggagggggatgat
gcgatctgtctagcagagctgaaggctggcttcatagctcagagctgtctagcccagggc
ctctccaccatgcttgccaatctcttttccatgaggtctttcatcgagattgaagaggat
acgtggcagaagtactatttagaaggggtagctaatgagatgtacacagagtatctgtcc
agtgcctttgtggggctctccttcccagcagtctgtgagctgtgctacgtgaagctgaag
ctgttgcttatcgccatcgagaacaagtcggagctgggagagagcagaagccgaaagcgc
atcctcatcaacccggggaaccacgtaaagatgcaggaaggaactctggggttcttcatc
gccagcgacgccaaagaagtaaagagagcatttttctactgcaaagcttgtcacgacgac
atcacagaccccaaacggatcaaaaagtgtggctgcaaacgactgatttattttgaagat
gagcacccgtcaactctgtcgcccaaaaaaaagcagcgaaacggaggtatgcgaaactca
cccaacaactcgcccaaaatgatgagcagacatgaccctctactaatccctgggaatgag
cagatggagaacatggacatgaatgtgaagcagtacgactccacgggaatgttccactgg
tgcccatctaaagagattgagaaggtcatcctgacccggagtgaggcatccatgacggtg
ttgagcggccatgtagtggtctgtatatttggagatgtcacgtccgctctagtggggctg
cgaaacttggtgatgcctttgagagccagcaacttccattatcacgagctgaagcccata
gtgtttgtgggctcgctggagtacctgaggagagagtgggaaactctacacaacttcccc
aaggtctccatactacctggtacgccattaagtcgtgcagatttaagggctgtcaacatc
aacctctgcgacatgtgcgtgatactgtcggccaatcagaacaatatcgacgacgcctcg
ctgcaggataaggaatgcattctggcgtcgctcaacatcaagtctatgcagtttgacgac
agcatcgggctcttgcaggctaactcccaaggtttcacgcctcctggaatggaccggtcc
tctccagacagcagtccagtacatggtttagtacgccaggcctccgtcaccaccggcgcc
aacatccccatcatcactgaactagctaaacctggcaaaatactgcctttggtttcattc
agtcaggaaaaaaactgtggaatcaacatacaaatgataactgagctggtgaacgactcc
aacgttcagttcctggaccaagatgatgatgatgacccggacacagagctgtacctgaca
cagcccttcgcctgcggaaccgccttcgctgtcagcgtgctggactctctcatgagtgca
acatacttcaacgataatatcctcaccctgatccggacgctggtgactgggggagccacc
ccggagctagaggctctattggccgaagagaacgccctgcgagggggctacagcacgcca
cagacactggccaaccgagacaggtgtcgtgtagcccagctagccctctatgacgggccc
tttgccgacttgggggatggcggttgctatggagatttgttttgtaaagcgttgaagacg
tacaacatgttgtgcttcggaatatacagattgagagacgctcacctcgccacgcctagc
cagtgtaccaaacggtatgtgatcaccaaccctccgtatgagtttgagctggtccccaca
gacctgatcttctgcctgatgcagtttgaccacaacgctggccagtcccgggccagcctc
tcccacagctcccactcctcccattcctccagcaaaaagagctcgtccgtccactccatc
cccaccaccaaccggcagaaccgcagcagcaaggcccgggaggccggccacaaacagaat
gcaacaaggatgaatagaatgagtcaagaaaggaaatggtttacagatgaaccagaaaat
gcctacccacggaacattcagatcaagcccatgagcactcacatggccaaccaaatcaac
caatacaaatccactagcagtctgattccaccaatcagagaagttgaagatgaatgctga
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