Oncorhynchus kisutch (coho salmon): 109899882
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Entry
109899882 CDS
T09179
Name
(RefSeq) nucleolar RNA helicase 2-like isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oki03009
]
109899882
03036 Chromosome and associated proteins [BR:
oki03036
]
109899882
Enzymes [BR:
oki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109899882
Ribosome biogenesis [BR:
oki03009
]
Eukaryotic type
Pre-60S particles
Helicases
109899882
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
109899882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Gly_acyl_tr_C
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
109899882
NCBI-ProteinID:
XP_020351089
Ensembl:
ENSOKIG00005032407
LinkDB
All DBs
Position
LG11:complement(21196542..21221982)
Genome browser
AA seq
748 aa
AA seq
DB search
MPSKIIFETENIGMEGELDISAGSTKPKKVKEKKTMEGKKIKKHKTVVEEEPDCEPPVPK
KKKKEKVDKANGDVNKSIDVNGNIESHLKNNTSYSNEESADNDKATEKKKTSEEVVVNRV
LPKTLTLIVQTNGHSTTTTPAHSSEDSGSDGEKEIETPEQKEGAFSNFRISPNTIKLLQA
RGISFLFDIQTQTFNSVYEGKDVIGQARTGTGKTLAFAIPLIEKIQNDPDDKRRGRAPKV
LCLAPTRELAIQVAKDFKDMTKKLSVTCFYGGSSYNPQLDAIRSGIDVLVGTPGRIKDHL
QNNKLDLSQLKHVVLDEVDQMLDMGFAEQVEEILSASYQKDSESNPQTLLFSATCPPWVY
VVAKKYMRPTYEHVDLIGKKTQKAATTVEHLAIACHWSQRAAVIGDVVQVYSGSHGRTIV
FCETKKDANELSMNTSIKQSSQSLHGDIPQKQREITLKGFRSGTFEVLVATNVAARGLDI
PEVDLVVQCSPPKDVESYIHRSGRTGRAGRAGVCICFYQRKEEDQLRYVEQKAGITFKRV
GVPTPSDIIKSSSKDAVRFLDSVPPQAIEYFRVAATKLIEERGAVDSLAAALAHISGATA
LEQRSLLNSDAGYTTMTMNCSQELHNIGCAWRGLKEQLGEEIDDVIRGMTFLKGKMGVCF
DVPADKVKEYQDAWQDGRRWQLSIATELPELEEKQRMGGDRGYGRSFSGRGGGGRGGGHG
FRNGGGGGGNWRGGGGSHKRSFSSAFDY
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgccatcaaagattatttttgaaacagaaaacatcgggatggaaggagaactggacatt
agtgcgggcagtacgaaacccaaaaaagtaaaggagaagaagaccatggaggggaagaaa
atcaagaaacataaaacagttgttgaagaggaacctgactgtgaacctcctgttccgaag
aagaagaagaaagaaaaggtggacaaagcaaatggggatgtgaacaaatccattgatgtt
aatggtaatattgaatcacatttgaagaacaacacatcttattccaatgaggagtctgca
gacaatgacaaagcaactgagaaaaagaagacgtcagaagaagtagttgtcaacagagtg
ttgcctaagactctcacgctgatcgtacaaactaatggacattccacgacgacaactcca
gcacattcaagcgaagactccggcagtgacggtgaaaaagaaattgagacaccagaacaa
aaagagggagccttttcaaacttcagaatctcccccaacaccatcaaactacttcaagca
cgaggcatatctttcctctttgacatccaaacccaaaccttcaattcagtgtatgaggga
aaggatgtaattggtcaggcaagaacaggcactggcaaaacattagcttttgctattccg
ctgatcgagaaaatccaaaatgacccggatgacaagaggcggggcagagccccaaaggtt
ttgtgccttgctccaacgagagaattggctattcaagtagccaaggatttcaaggacatg
acaaagaaactgtctgttacctgtttctatggtgggagttcctataaccctcaacttgat
gcaatccgcagtggcatcgatgtcctagtgggaactccaggtcgtatcaaggaccatcta
cagaataacaaactggacctgtcacaattgaagcacgttgtattagatgaagtggaccaa
atgcttgatatgggctttgcagaacaggtggaggagatactttctgcatcttaccaaaaa
gactctgagagcaatccccagaccctgctcttctctgccacatgcccaccatgggtgtat
gttgtggcaaagaagtacatgaggccaacttatgagcatgtggacctcattggcaaaaag
acccagaaagctgccaccacagtagagcaccttgccattgcgtgtcactggtctcagagg
gctgcagtcattggggatgtggtccaggtgtacagtggcagccacggccgcaccatcgtc
ttctgtgagaccaagaaggatgccaacgagctgtcaatgaacacctccataaaacagagt
tcccagtcacttcatggggacattcctcagaagcagagggagatcacattgaaaggcttc
agaagtggcacctttgaggtcttggtggccaccaacgttgctgctcgtgggttggacatc
ccagaggtagacctggtcgtgcagtgctcacccccaaaggatgtggagtcatacattcac
cggtcaggtcgcactggtagggctggcagggcaggcgtctgcatctgtttctaccaacgc
aaagaggaagaccagctccgatacgtagagcagaaagcaggcatcacatttaagagagtt
ggagtgcccactcccagtgacatcatcaaatcctccagtaaagacgccgtaaggttttta
gactctgtgcctccccaagccattgagtacttccgtgtggctgctaccaagctgattgag
gagcgtggggccgtggattccctggctgccgccctggcacacatatcaggtgccactgcc
ctggagcagaggtccctcctcaactctgacgctggctacaccacaatgacaatgaactgc
tcccaggagctgcacaacattggctgtgcttggcgtggtctaaaggagcagctgggagag
gagattgacgatgtgatccgggggatgaccttcctcaagggaaaaatgggagtctgtttt
gatgttccagctgacaaagtaaaggagtaccaagatgcatggcaggatggtaggcgttgg
cagctgtcaatcgccacagagctccctgagctggaggagaaacagcgcatgggtggtgac
cgtggatacggacgctcgttcagtggacgtggtggtggaggacgagggggtggccatggc
ttcagaaacggcggcggtggtggtggcaactggagaggaggtggaggcagtcataaacgc
agcttcagcagtgcatttgattattaa
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