Oncorhynchus kisutch (coho salmon): 109899904
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Entry
109899904 CDS
T09179
Name
(RefSeq) probable E3 ubiquitin-protein ligase TRIM8
KO
K12001
tripartite motif-containing protein 8 [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109899904
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109899904
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109899904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
RING_XB3-XBAT31
DUF3287
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
109899904
NCBI-ProteinID:
XP_020351120
Ensembl:
ENSOKIG00005026154
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Position
LG11:20533236..20541378
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AA seq
604 aa
AA seq
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MVEEQRDQPEGGVFVACLSAAPKMASNMATSDLSETWRNCFEEELICPICLHVFSEPIQL
PCKHNFCRGCISEAWAKDSSLVRCPECNHAYSQKPALEKNHKLSNIVDKFNALSVEKAAS
PVLQCILCRRGPPLPAVKVCLRCSAPCCQSHVQTHLQQPCSALGHLLVEAEAVKAWTCPQ
HDEYRLYHCEAEQTAVCQYCCFTRCHPSHGHGVTDVELRRNDIRQNLLRQQERVEERVQD
IDEQLCKLDSDKCVVEDRVCELKEEVRVQYQRMQHFLEEDLSRTLEVLERARSRFCQENA
GQVLALGEQRHEAQKLLSSVHTAFGKAEELGFMKNTKPVKILMERSQACVGSALPPYKVG
SLNSKLFLSELSKREKSLRKTLEAPLAPPSSFLQSVQAYPSGLGSGAEKRKHSSAFPESN
GSTGKTSASGFKDSSSKQPYLGPNSAPGEGQSSNQQPLVPCGSSHMNENGGTGSGSGSLT
NHHSGSVFGPSHFPPAGSSSSHTSQQAVLPQYGGRKILVCTMDNCYCSGVPSVSGHRGHP
PYPRSGSFPWVSTQDYPPPPGLASGAPAMQGLAVRDWIDAQQTHRHTDFYGLYGQPSTKH
YVTS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggtagaggagcaacgggaccagccggaaggaggggtctttgtcgcgtgtctgtccgcc
gctcccaaaatggcctccaacatggcgacctccgacctgtccgagacatggaggaactgt
ttcgaagaggagctgatctgccccatctgcctgcacgtcttctccgaacctatccagctg
ccctgcaagcacaacttctgccggggctgcatctccgaagcctgggctaaagactcttcc
ctggtccgctgccctgagtgcaaccacgcctacagtcagaagcctgctctggagaagaac
cacaagctgtccaacatcgtggacaagttcaacgctttgtctgtagagaaggccgcctcg
ccggtgctgcagtgtattctgtgccgccgtggccccccactcccggctgtcaaggtttgc
ctgcgctgtagcgccccctgttgccagagccatgtccagacacacctgcagcagccctgc
tccgccctgggacacctgctggtggaggctgaggcagtcaaggcctggacgtgtcctcag
catgacgagtacagactgtaccactgtgaggcagaacagacagccgtgtgtcaatactgc
tgcttcacacgatgccatcccagtcacggacacggagtcactgacgtggagctacgccgc
aacgatatacggcaaaatctattgcggcagcaggagagggtggaggagagagttcaggac
atcgatgagcagctctgtaaactcgactctgacaagtgtgtggtggaggatagagtgtgt
gagctaaaagaggaggtgcgtgtgcagtaccagcggatgcagcacttcttggaagaagac
ctgtcccgaacactggaggtcctagagcgggcgcgttctaggttctgccaggagaacgcg
ggccaggttctagctctgggagaacagagacacgaggcccagaagctgctcagctcggtc
cacacggccttcggcaaggctgaggagctgggcttcatgaagaatactaaacctgtcaag
atcctcatggagaggtctcaagcgtgcgtgggaagtgcgctccctccctacaaggtgggc
agtctcaactctaagctgttcctgtcagaactctccaagagggagaagagcctacggaaa
acactggaagcccccctagcccctccctcctcgttcctccagtccgtccaggcgtatccc
agcggccttggctccggggcagagaaacgcaaacactcctctgcgttcccagaaagcaac
ggaagcactgggaaaacgtctgcttccgggttcaaggactcctcatccaagcagccctac
ctaggcccaaactctgcccccggggagggccaatcctccaatcagcagcctctggttccc
tgtggctcctcccacatgaatgaaaatggcggaacaggaagtggaagtggctctctaaca
aatcaccattcagggtctgtgttcggtccctcccacttcccccctgctggcagtagctcc
tcccatacttctcaacaggcagtgctcccccagtatggcgggcgtaagatcctggtgtgt
accatggataattgctactgctctggggtaccctctgtgtcgggccaccgcggccaccct
ccctacccacgttcaggctcctttccctgggtaagcacccaggactacccccctccccct
ggcctggcctctggagcgccagccatgcaagggctggctgtcagagactggatagatgca
cagcagacgcacagacacacagacttctatggcctgtatgggcagccctccaccaagcac
tatgtcaccagttaa
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