Oncorhynchus kisutch (coho salmon): 109899912
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Entry
109899912 CDS
T09179
Name
(RefSeq) Na(+)/H(+) exchange regulatory cofactor NHE-RF1 isoform X1
KO
K13365
sodium/hydrogen exchange regulatory cofactor NHE-RF1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109899912
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oki02000
]
109899912
Transporters [BR:
oki02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
109899912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
EBP50_C
PDZ_2
Motif
Other DBs
NCBI-GeneID:
109899912
NCBI-ProteinID:
XP_020351130
Ensembl:
ENSOKIG00005025505
LinkDB
All DBs
Position
LG11:complement(20229556..20293134)
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AA seq
385 aa
AA seq
DB search
MSNLRPRLCVLGKGSNGYGFHLHGEKGKTGQFIRLVEPDSPAAAAGLFAGDLLTFVNGDS
VESESHQQVVARIRATVGSLELIVVDAKTAEVLNKHSLKCRKEYVTEGIPLPGEAAKSNG
TSRETTPIPAENGNLSLQRLSVNTKESKAELRPRLCSLKKGATGYGFNLHSEKSKPGQYI
RAVDEDSPADKAGLKPQDKILQVNSMSVVGMQHSEVVAAIKAGGDETSLLVVDREAEAFF
NSCDIIPTEAHLTGPLPEPVSDGGAEEEVGVKPKVSVSSSTSSASSTGSLPTATASTPPP
EAQFQVVPAKESDAGLSLSMSLAQAKRGLTRNVQPRKSLPWTGARGMNSSVTYKPHFLPP
FCLPFALSKRAHTHTHVKVLLVVIS
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatctccggcctagactttgtgttttaggaaaggggtcgaatggctacggcttt
catctgcacggtgagaaagggaaaaccggacagtttatccgactcgtagaaccagactct
cccgccgccgccgcgggtctcttcgccggggacctactgacgttcgttaacggggacagc
gtggagagcgagagccaccagcaggtcgttgcccggatacgagccacagtgggcagcctc
gagctgatcgtggtagacgctaaaacggcagaggtactaaataagcacagcttaaagtgc
cgtaaagagtatgtcacggagggcatcccgttaccaggggaagcagcgaaaagcaacggg
acctcgagagagacgacccctataccggcagagaacggaaacctctccctacagaggctg
agtgtcaacaccaaggaatcgaaggcagagctgcgtcctcgtctgtgctcgctgaagaag
ggtgcgacgggctatggcttcaacctgcacagtgagaagtctaaaccaggccagtacatc
agggctgtggacgaggactctcctgcggacaaggctggcctcaaaccccaggacaagata
ttacaggttaacagtatgtcagtagtagggatgcagcacagtgaggtggtagcagccatt
aaggccgggggagatgagaccagtctactggtggtggatcgtgaggcagaggctttcttc
aacagctgtgacatcattcctactgaggcccacctcacaggacctcttcctgaacctgtg
tcggatggaggagcagaagaggaggtgggggtaaagcctaaggtgtccgtcagttcgtct
acatccagcgcttcctccactggctctctaccaacagccactgccagcacccctccacca
gaggcacaattccaggtggttccggctaaggagtctgatgcaggcctatccctcagcatg
tctctagcccaggccaagagagggctcaccagaaacgttcagccaagaaagtccctgcca
tggactggcgcaagaggaatgaactcttcagtaacttataaaccacatttccttcctcct
ttttgtctaccttttgctctctccaaacgcgcacatacacacacacacgtgaaagtgtta
ttggttgtgatttcatga
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