Oncorhynchus kisutch (coho salmon): 109899919
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Entry
109899919 CDS
T09179
Name
(RefSeq) ATP-binding cassette sub-family A member 5-like isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109899919
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oki02000
]
109899919
Transporters [BR:
oki02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
109899919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_23
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
109899919
NCBI-ProteinID:
XP_020351141
Ensembl:
ENSOKIG00005019248
LinkDB
All DBs
Position
LG11:19479306..19582481
Genome browser
AA seq
1687 aa
AA seq
DB search
MYFIPIAPSCGERPHSCPRQLKHAGSNVSMQPNIIRRDAGVWHQTKSLLYKNLLIKWRTK
QQSLQELILPLLLLCLLILISTLNPHVYYGGISTMELEREDYHLLKGLGYTPINNATNHI
MEEVAQEMHLQDRLEMFSSEEDLENASLYEPSGYVGVVFMGSTPTSYRLRFPYNHLPLPS
DYTESIANCFASSVNCRAANYWYSGFIRLQTLIDAAIIQMQTKRSVWSEMDHLRVVMMGQ
PGSVEVQKFPHALISIYLVLAFTPFITFLIVNVAAEKEHRLKDTMTMMGLYDSAFWLSWG
LLYAALVTTMSILMSIIATYTALFPNSDFIVIFLLIFLYGISSIFFSFMLTPLFKKPKFA
STVGSMLTVVFGCLSLFTVLMKDFPQPLVWVLCLLSPSAFSIGIAQVVYLEAQGDGAVFA
TLANGPHPLYAPLVMLVLDCILYLLLAVYLDQVLPGEFGMRRSLVYFMKPSYWSKRSKRY
VEVSSVYETEVNGATGVNESVEPVSPEFRGKEAIRINNIRKVYKEKDSIVEALRGLTFDI
YEGQITALLGHSGAGKSTLMNILCGICPPTDGHASIYGSPVAEIAEGAEMRQLVGICPQF
NIIFDVLTVEEHLRIFAAIKGILPSDIDNEVSKVLKDLDLEKIMDAQAKNLSGGQKRKLS
VGIAILGDPKILLLDEPTAGMDPCSRHQVWSLLKSRRAGRVTVLSTHYMDEADILADRKA
VISQGQLKCVGSSLYLKTKCGVGYHLRMSIGGRCEVDGVTSLVKHHVPKAQLSRQQEAEL
TFTLPFESMDTFSGLFSELDCRPDLGIINYGVSMTTLEDVFLRLEAEAEVDQADYSVFNQ
EQVEDEGDASSLDDTDQRLLTFSDSKPEAVQGHALWRQQFSTVAWLHMLNMQRERKAFVY
TLALFLVFLAAVLVLSLATGNIQIHAPERQFLPIYLLRPNQAPRKYTTSLLVQNSSGSDI
SDFIRNLESQDIKVEMMKNTDYMSCAPHSAAINVTGSNKGFRYSVAFNSTTVHSLPMTVN
VLSNAILRGLNGTQRIHTWTKPFDYQIPDATSYALVYIEAIILGMLAAGMPAYFAMDHTR
DREIKCRSTLRISGLVPSAYWCGQAAVDIPFYYLILTTMTSILFSFHTANLLTSSNVTAV
ILCLIGFGPAMILFAYVVSFMFTRVQSNRDFFSVVSMMVCVVSASIVQLSFVNDNPGLTR
ILHNTLCFFNPLYPLMGCLNSITKATFLPSLYEEDFLWKNLLIAVLSPYLQCILLLFILR
WLEIRYGGRTMKNDQFCRISSNTKAKVERNPEEGINEDEDVQMEKARVKEALTCQCCEEK
PVVVVSNLRKQFKCPREGISLKKRRTVATKNISFCVRKGEVLGLLGPNGAGKSTIMHMLS
GDTVPTAGQVLMGDYSTEFRPVDNPLEHIGYCPQVSPLWPRITLEEHLEIYAAIKGLRGQ
DVPGIITRVVNALELKGHLHKQAKNLSAGIKRKLCFALSMLGNPQIVLLDEPSTGMDPKS
KQRMWRAIRAAFKNRQRGAILTTHYMEEAEAVCDRVAIMVSGQLRCIGSIQHLKGKYGRG
YSLELKLREELTGLQQVALLHKEIRRIFPHAARQESFATLMVYKIPMEDVKSLAKSFSQL
ESAKQAFNFEEYNFSQSTLEQVFMEFAKEQENEEEEVGSLSTTFQWQRLRQDGPVPVNHT
DSIVHQL
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcatacctattgcgcccagctgtggagaacgtcctcattcatgccccagacag
ttgaagcatgctggtagtaacgttagtatgcagcccaacataatcagaagagatgccgga
gtctggcatcaaacgaaaagcctgctttacaagaatcttctcatcaaatggaggactaaa
caacagagtctgcaggagttgatcctgccgctgctgctgctgtgcctgctgattctgatc
agcaccctgaacccacatgtctactacggaggcatcagtaccatggagctggagagggag
gactaccacttactcaagggcctgggatacacccccattaacaatgccaccaatcacatc
atggaggaggtggcccaggaaatgcacttgcaggatcgcctggagatgttctctagtgaa
gaggatctggagaatgccagtctttatgagccctcaggctacgttggggtggtcttcatg
ggcagcacacccacctcttacaggttgcgcttcccttacaaccatctgcccctgcccagc
gactacactgaatctattgccaactgttttgccagctcagtgaactgcagagcagctaat
tactggtactctggcttcatccgcctccagactctcatcgacgccgccatcatacagatg
cagaccaagcggtcagtatggagtgagatggaccacctgcgtgtggtgatgatgggccag
ccagggtcagtggaggtccaaaagtttccccacgctctcatctccatctacctggtgctg
gctttcacacccttcatcaccttcctcatcgtcaacgtggcagcagagaaggaacacagg
ctcaaagataccatgaccatgatgggcctctatgactctgccttctggctatcgtggggc
ctgctgtatgcagctctggtcaccaccatgtccatcctcatgtccatcatcgctacctat
acagctctcttccccaacagtgacttcatcgtcatcttcctcctcatcttcctctacggc
atctcctctatcttcttctccttcatgctgacccctctgtttaagaagcctaagtttgcc
agtacggtgggctcaatgctgactgtggtgttcggctgcctgtccctgttcactgtcctg
atgaaggacttcccccagccgctggtctgggttctttgtctgctgtcccccagcgcattc
tccatcggcattgcccaggtggtgtacctggaggcccagggggacggagctgtgttcgct
accctggccaacggcccccatcccctatacgccccccttgtcatgctcgtcctggactgt
atactctacctgctgctggctgtctacctggaccaggtcctaccaggtgagtttggcatg
cggcgctccctggtatacttcatgaagccatcctattggtccaagcgcagtaagcgctac
gtcgaggtgagctctgtgtacgagacggaggtgaacggggccacaggagtgaatgagtct
gtggagcccgtctctccggaattcagggggaaagaggccatccgcattaacaacatccgc
aaggtgtacaaagagaaggacagcatcgtggaagctctgaggggcttgacctttgacatc
tatgaaggtcagatcacagccctcctgggccacagcggagcagggaagtccactctgatg
aacatcctgtgtgggatctgtcctccgactgacggccacgcttccatctatggctcccct
gtggcagagatagctgagggggcagagatgaggcagctggtgggcatctgccctcagttc
aacatcatctttgacgtgctcactgtagaagagcacctgaggatatttgctgccattaaa
gggattctgccctctgacattgacaatgaggtgtccaaggtgctgaaggatctagacctg
gagaagatcatggacgcccaggctaaaaacctgagtggaggccagaagaggaaattgtct
gtgggcatagccatcctgggagaccccaagatcctgctcctggatgagcctactgctggt
atggacccctgttccagacaccaggtgtggtctctgctgaagagtcgcagagcaggcaga
gtcacggtgctcagcacacattacatggacgaggcagacatactcgctgaccgcaaagct
gtgatctctcagggccaacttaagtgtgttggttcttccttatatctcaagaccaagtgt
ggagtaggataccacctcagaatgtctattggtggacggtgtgaggtggatggtgtcaca
tcattggtcaagcaccacgtccccaaggcgcagttgtcacggcaacaagaggctgagctg
acattcaccctccctttcgaaagcatggacaccttttcaggattgttctcagaactagac
tgcaggccagacctgggtatcatcaactacggggtgtccatgacaacgctggaggatgtg
tttcttcgtctggaggctgaggctgaggtggaccaggctgactacagtgtgttcaaccag
gagcaggttgaggatgagggtgatgcatcctctctggacgacactgaccaaagactactg
accttctctgacagcaagccagaggcggtccagggccatgctctgtggagacagcagttc
agcaccgtggcctggctacacatgctcaacatgcagagagagaggaaggcctttgtctac
actctggcattgttcctggtcttcctagctgctgtgctagtattgtctctggctacgggg
aacatccagatccacgctccagaacggcagtttctccccatctacctgctgagaccgaac
caggctccccggaaatacaccaccagtctactggtccagaactcatcaggctcggatatc
tccgacttcatccgtaacctggaatctcaggacatcaaggtggagatgatgaagaacaca
gactacatgtcctgtgctcctcacagtgcagccatcaacgtcaccggatccaacaagggt
ttcagatacagtgtagcattcaacagtactaccgtccactctttgcccatgacagtcaac
gtcctcagtaacgccatcctacgaggtctcaacggcacacaacgcatccacacctggacc
aagcccttcgactatcaaattcccgacgccacgtcatatgctctggtctacattgaggct
atcatactggggatgctagctgcaggcatgcctgcctacttcgccatggaccacacccga
gacagagagataaagtgccgttcaacgctgcgtatctctggcctggtcccgtctgcgtac
tggtgtggtcaggctgcagtggacatccccttctactacctcatactgaccaccatgacc
agcatcctcttctccttccatactgccaacctgcttacctctagcaacgtcaccgcagtg
atcctgtgtctgataggttttggtccagctatgatcctgttcgcctatgtggtgtctttc
atgttcacacgcgtccagagtaacagagacttcttctctgtggtctcaatgatggtgtgt
gtggtgtctgcctccatcgtccagctgtcatttgtgaacgacaaccccgggctgacgagg
atcctccacaatacactatgtttcttcaaccctctctaccccttaatgggctgccttaat
tctatcaccaaggccaccttcctgccctccctctatgaagaggacttcctctggaagaac
ctgctcatagctgtcctatctccctatctgcagtgcatcctgctgctgttcatactgcgc
tggttggagatccgctatggagggaggaccatgaagaatgaccagttctgcaggatctct
tccaatactaaggctaaagtggagcgtaacccagaggaggggatcaacgaggatgaagat
gttcagatggaaaaggctcgggtgaaggaggccctcacctgccagtgctgtgaggagaaa
ccagtagtggtggtgagtaacttgaggaagcagtttaaatgtccaagggaaggaatctct
ctcaagaagaggaggacggtagccaccaagaacatctccttctgtgtacgcaaaggtgag
gtgcttggactgctggggcccaacggagcagggaaaagcaccatcatgcatatgttgtct
ggagacacagtcccaaccgctggacaggtcctgatgggggactacagtacagagttccgt
ccagtagacaaccccctggaacatataggctactgtccccaggtcagccctttgtggccc
cgcatcaccctggaggaacacctggagatctacgctgccatcaagggcctccgcggacag
gacgtccctggcatcatcacacgtgtggtgaatgctctggagctgaagggccacctccac
aagcaggccaaaaacctctcagctgggatcaagaggaagttgtgctttgctctcagcatg
ttggggaaccctcagatagttctgctggacgagccttctacagggatggaccccaaatcc
aaacaacgcatgtggagggctatccgggcagcgtttaagaaccgccagcgtggggccatt
ctgaccactcactacatggaggaggctgaggctgtgtgtgaccgcgtggccatcatggtg
tcagggcagctcaggtgtattgggtctatccagcacctgaaggggaagtatgggcgtggc
tacagcctggaattgaagctgagagaggagctgacggggctccaacaagtggcactgctc
cacaaggagatacgtcgaatcttccctcacgctgcaagacaggagagctttgccaccctg
atggtttacaagatccccatggaggatgtcaagtcactggccaagtccttctctcagcta
gagagtgctaagcaagccttcaactttgaagagtacaacttttcacaatcaaccttagag
caggtcttcatggagtttgctaaggagcaggagaacgaggaggaagaggtgggttccctc
agcaccacgttccagtggcagcggctccgccaggacggccctgtgcctgtcaaccacaca
gacagcattgtgcaccagctctga
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integrated database retrieval system
