Oncorhynchus kisutch (coho salmon): 109899946
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Entry
109899946 CDS
T09179
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
109899946
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109899946
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
109899946
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
SR-25
Motif
Other DBs
NCBI-GeneID:
109899946
NCBI-ProteinID:
XP_020351206
Ensembl:
ENSOKIG00005013746
LinkDB
All DBs
Position
LG11:15984247..16187574
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AA seq
1203 aa
AA seq
DB search
MPKGKHSYYPDSPSIRISKMDVIIPFSPDVPCDSNGQRMWWAFLASSMVTFFGGLFIILL
WRTLKYLWTVCCHCNTKKKNAQRVHNPTSHGDGIKHTKETVAALSEVGWMTSVKDWAGVM
ISAQTLTGRVLVVLVFALSIGALVIYFIDSSDPIESCQNFYKDFTLQIDMAFNVFFLLYF
GLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFL
NILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQNSQALSYWECVYLLMVT
MSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVNGRKH
IVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGS
VLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYH
NKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTW
QKYYLEGVANEMYTEYLSSAFVGLSFPTICELCYVKLKLLLIAIEYKSDIRESSTLINPG
NHVKMQEGTLGFFIASDAKEVKRALFYCKACHDDITDPKRIKKCGCKRSKNNYNGYIKSI
EEEQYSTLSPKKKQRNGDTRNSPNGSPKMMRHDPLLMPGNEQIENMDMNVKKYDSTGMFH
WCQSKDIEKVILTRSEAAMTVLSGHVVVCIFGDAKSALVGLRNLVMPLRASNFHYHELKP
IVFVGSLEYLKREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDA
SLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPENSPLHGGLVRQASITT
GANIPIITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDN
ILTLIRTLVTGGATPELEGLLAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGD
GGCYGDLFCKALKTYNMLCFGIYRLRDAHLNTQSHTSQCTKRYVITNPPYGFELVPSDLI
FCLMQFDHNAGQSRASLSHSSHSSHSSSKKSSSIHSLTATNRTNRAKSRDSRDKQNATRM
NKMGQEKTWFTDEPENAAYHRNIHIKPMSTSHSSHTANHQVNQNPYKSTNNHIPSIREVE
DEC
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaggtaaacatagttactacccggactctccctctatccgcatatccaagatg
gatgtgatcatcccgttctccccagatgtgccctgtgatagcaatgggcagcgcatgtgg
tgggctttccttgcctcctccatggtcacgttctttgggggtctcttcatcattctgctc
tggagaactctcaagtacctgtggaccgtctgctgccactgtaacaccaaaaagaagaat
gctcagcgtgtccacaaccctacctcccatggggatgggatcaagcacaccaaggagacg
gtggctgcactcagtgaggtgggctggatgacctccgtcaaagactgggctggggtcatg
atatcagcccagacactgacgggcagagtcctggtggtgcttgtgtttgccctcagcatc
ggagcccttgtaatatacttcatagattcctctgaccccatcgagtcctgtcagaacttc
tacaaagacttcacgctacagattgacatggctttcaacgtcttcttcctcttgtacttt
ggtctacggtttattgcagccaatgacaagctgtggttctggctggaggtgaactcagtg
gtggacttcttcactgttcccccagtgttcgtgtctgtttatctcaacaggagctggctt
ggcttgaggtttttaagggcgttaaggttgatacagttctcagaaatcttacagtttttg
aacatattaaaaacaagcaattccataaaactggtgaacttatgttcaatcttcataagt
acatggctaacagcggcaggcttcatacatctggtggaaaactcaggggatccttgggaa
aacttccaaaattcccaagcactttcctactgggaatgtgtctacttactcatggttact
atgtccactgtgggctatggagacgtgtatgcaaaaaccaccctgggacgacttttcatg
gtcttcttcatccttggtggtttggccatgtttgcgagctacgtccctgaaatcatagag
ttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggagaaagcac
atcgtggtctgtggtcatataacacttgaaagtgtgtccaacttccttaaagacttccta
cacaaggacagggatgatgtcaatgtagaaattgtttttctccataatatttcccctaat
cttgagctggaagccttgtttaaacgccacttcacccaggtggagttctaccagggatct
gttctcaacccacatgacctggccagagtcaagatagagtcagcagatgcctgtttgatc
ctagctaataaatactgtgcagaccctgatgctgaggatgcctccaacatcatgagggtg
atatccatcaagaactaccacccaaaaatccgaatcattacccagatgttgcagtaccac
aacaaggcccaccttttgaacattcccagttggaactggaaggagggtgacgatgccatt
tgccttgctgagctgaagctgggcttcatagcacagagctgtctggctcagggcctgtcc
accatgctggccaacctcttctccatgaggtccttcatcaagattgaagaggacacgtgg
cagaagtattacctggaaggagtagccaatgaaatgtacactgagtatctgtctagtgcc
tttgtgggcttatccttcccgaccatttgtgaactctgctatgtgaagctgaagctgcta
ctgattgctatcgagtacaagtctgatataagggaaagcagcaccctcatcaaccctggg
aaccatgtgaagatgcaggaaggaaccctggggttctttatcgccagcgatgccaaagaa
gtaaagagggcacttttttactgcaaagcttgtcacgatgacatcacagatcccaaaagg
ataaagaaatgtggatgcaaacgatcaaaaaataactataacggatatatcaaatcaatc
gaagaggagcagtattcgacactgtcgcctaaaaagaaacaacgtaatggtgacacaagg
aactcacccaacggttcaccaaaaatgatgaggcatgaccctctcctcatgccggggaac
gaacagattgagaacatggacatgaacgtgaagaagtacgactccacagggatgttccac
tggtgccagtccaaagacatcgagaaggtcatcttgaccagaagtgaagctgccatgact
gtcctaagcggccacgtggtcgtctgtatatttggagacgcgaagtcggctttggtgggc
ctaaggaaccttgtgatgcctctgagagctagcaacttccactaccacgagctgaaaccc
atcgtgtttgtgggttccctggagtatctgaagagggaatgggagacccttcacaacttc
cccaaagtctccatcttacctggcacaccattaagccgggccgatctgagggctgtcaat
atcaacctctgtgacatgtgtgtcatcctgtcggccaatcagaacaatattgacgacgcg
tcactgcaggacaaggaatgcatcctggcgtcactcaacatcaagtccatgcagtttgac
gacagcatcggggtcttgcaggctaactcccaaggtttcactcctccaggcatggacagg
tcctctcctgaaaacagtccacttcatggggggttggtccgacaggcttccatcacaaca
ggagccaacatccccatcatcactgaactagtgaatgactccaatgttcagttcttggac
caggatgatgatgatgaccctgacacagaattgtacctcactcagccctttgcctgtggg
acggccttcgcagtcagtgtgctggattccctgatgagtgcgacatacttcaatgataat
atcctcaccctgatccggacgctggtaacagggggggccactccggagctggagggtctg
ttggcggaggagaatgcattacgaggaggctacagcacgccgcagaccctcgctaaccgg
gacaggtgtcgtgtggcacagctagccttgtacgatgggcctttcgctgacttgggagat
ggtggctgctacggtgacttattttgtaaagctttaaaaacatacaacatgctgtgcttc
ggaatttatcgattaagagacgcacatttaaacacacaaagtcatacaagtcaatgcact
aaacggtatgtgataaccaatccgccatatggttttgagttggtgccatcagacctgatc
ttctgcctgatgcagtttgaccacaatgcgggtcagtccagggccagcctctcccacagc
tcccactcctcccattcttccagcaaaaagagctcctccatccattctctcactgccacc
aaccgtaccaaccgcgccaagagcagggactcgcgggacaaacagaatgcaacaaggatg
aataaaatgggccaagaaaagacatggtttacagatgagcctgagaacgcggcctaccac
aggaacattcacatcaagccaatgagtactagtcacagtagtcacacagccaaccaccag
gtcaaccagaacccttacaaatccaccaacaaccatattccatccatcagagaggtggag
gacgaatgctga
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