Oncorhynchus kisutch (coho salmon): 109900078
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Entry
109900078 CDS
T09179
Name
(RefSeq) rho GTPase-activating protein 27-like isoform X2
KO
K20636
Rho GTPase-activating protein 12/27
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109900078
Membrane trafficking [BR:
oki04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
109900078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
WW
PH
SH3_1
SH3_9
PH_9
Motif
Other DBs
NCBI-GeneID:
109900078
NCBI-ProteinID:
XP_020351389
Ensembl:
ENSOKIG00005048193
LinkDB
All DBs
Position
LG11:6699305..6750578
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AA seq
1021 aa
AA seq
DB search
MAMVQVQFEYEYTAKDGALVSIKPNERYILVSRTNDYWWHVRKDQRTKPFYIPAKYVREL
SVKTQGPLDLTNSGTQSRTFLLSTTDREPLDMSNKGQWSGAVTKVRMSTDHSARATTLRM
STFGVSLDIDDIKHYEHMKTMVGLQTSNNETRDIPPHDLKRRSLAPGFSFTSASDAQGLG
DMLQHCSLKLHVSPEPTSRLPQLQSSAPTLIKDQDKQLISSGRITKTLPGDPSGLSHLSQ
DSDIHETISDTQHSELTDFVGTELDGSLGSTETPAEQQQSLDRTSGPIDITAPSPTAQVK
ESVQNAVYVNVAELGRNISESPPSAFSPPCTPPYLDSKGWEVHTDQESGREYYYHPESGQ
TTWDSPHIDPEAPAEVSVCSPSSQFPSLSPTSASPPAWTSDWEQCLDVTSGHQYFYNPVS
GETSWESPEPQCPYPALMEPLSGLRSLEEGPPPLPEEDYQADDYPADNYLAEVDLPEEEL
LAVSPVTPHSFPKDYTPSHVTRAVIPRASLDRSAPTGWNLNIDPDGTWVFSNRHSPDQWI
KSLDDRGLTYYYLRDGSRSQWNLPEAPVVSGQSKVGNGVELDGVSLTVMKNWRHTMGATY
VSSALQEVFSPTHRRNASDYGSCVNNSPEMGQHHVQSLEKVGILNKTKVSENGKRVRKNW
AQSWTVLHGGVLTFHKEPKSAAMGASIKTNQIVPEVTVDLRGAKIGWALRVKSSKKNVVE
LKDRNGVEFLLQYDTESIINDWHKVLMDTIRQLDQEHHQSEEEDGDVSEKSYSTDRDQRS
PASRPSTATSSGGETEQKKVRTKLMKFLLKRPTLQFVKEKGYIRDNVFCCHLAALCAQEK
TTIPSFVEKCIRAVEKRGLDMDGLYRVSGNLAVIQKLRFKADHEELDLEDGQWEDIHVIT
GALKLFFRELPEPLFPFSHFSRFIQAIRTVDYHHKVSYMRELVESLPRPNHDTMELLFSH
LRKVIEYGEENRMTVQNVAIVFGPTLLRPEMESANIAMHMVFQNQIVELILNQYEYIFHS
S
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggtgcaggtgcagtttgagtatgagtacacagccaaggacggggctctggtc
tccatcaagcccaatgagaggtacatcctggtctccaggaccaacgactactggtggcat
gtccggaaggaccagaggaccaaacccttctatatccctgccaagtatgtgagggagctc
tctgtgaagacccagggcccactggacctcactaattctgggactcagagtcgcacattc
ttgctgtcaacgactgacagagagccactggacatgtctaacaaaggtcaatggtcaggt
gctgtgacgaaggtccgcatgtccacggatcactctgcgagagccaccactctcaggatg
tccacgttcggggtctcactcgacattgatgatatcaagcattatgagcacatgaagacc
atggtgggactgcagacctccaataacgagactagagatatcccgccacatgatctgaag
aggcgaagtttagctccaggtttctcattcacctcagcctcagacgctcaaggtcttggt
gatatgttgcagcactgttccctaaagctccatgtctcacctgagcccacaagcagactt
ccccagttgcagtcaagcgctcctacacttatcaaggatcaagataaacagctgatctca
agtggccggataacgaaaacactgccaggggatcctagtgggctatctcatttgtctcag
gactcagatatccatgagactatatcagatacccagcactcagagttgacagactttgtg
ggaacagaactggatggatctttgggttcaactgaaacaccagcagaacaacagcagagc
ctggatcgaacttctggtccgattgacattacagccccttcccctacagctcaggtcaaa
gagagtgtccagaacgctgtgtacgttaatgtagcggagctcggcagaaacatctctgag
tcccctccctcagccttctcccctccctgcactcctccatacctggactctaagggatgg
gaggtgcacactgaccaggagagtggacgggagtactactaccaccccgaatcggggcag
accacctgggacagcccccacatagaccctgaggctcccgccgaggtgtctgtgtgttcg
ccctcctctcagttcccctccctgtcccccacctccgcgtccccccctgcatggacctct
gactgggagcagtgtttggatgtgaccagcggccaccagtacttctacaacccagtatcg
ggggagacgtcttgggagtccccagagccacagtgcccctaccccgctctgatggagcct
ctgagtgggctccggtctctggaggaagggccgcctcccctgcctgaggaggactaccaa
gcagatgactacccagcagataactacctagccgaggttgacctaccagaagaggagttg
ttggctgtgtcccctgtgacccctcactccttccctaaggactacacccccagccatgtg
acccgggcagtcatccccagggccagcctggacaggagtgccccaacgggctggaacctc
aacatagaccctgatgggacttgggtgttctccaatagacactcacctgatcagtggatc
aaatcgttggatgacagaggactgacgtactactaccttagagatggctccagatcccag
tggaacctgcctgaggcccctgtagtgtcaggccagtccaaggtggggaacggtgttgag
ctggacggggtctctttaacggtcatgaagaactggagacacaccatgggtgcaacttat
gtcagctcagccctgcaggaggtgttctccccgactcacagaagaaatgcctcagactac
ggctcctgtgtgaacaactctccagagatggggcagcaccacgtgcagagtttggaaaaa
gttggaatactcaacaaaactaaagtgtcagagaacgggaaaagagtaaggaaaaactgg
gcccagtcatggacggttcttcacggaggagttctgaccttccataaagagcccaagtct
gcagccatgggagcctctatcaagaccaatcagatcgtcccagaggtcacggtggatcta
cgaggggcaaagattggctgggctctcagggttaaatccagcaaaaagaatgttgtagaa
ttaaaagacagaaatggtgttgagtttctgctacagtacgacactgagagtatcatcaac
gactggcacaaagttctaatggacaccatacgacagctggaccaggaacaccaccaatct
gaggaggaggatggggacgtcagtgagaagtcctacagtacagacagagatcagaggtca
ccagcttccagaccgagcacggccacctcctctgggggagagaccgaacagaagaaggtt
cgtaccaagctgatgaagttcctcctgaaacgacccacactgcagttcgtcaaggagaag
ggttacatccgagacaatgtgttttgctgtcacctggctgcactgtgtgcccaggagaaa
actacaatccccagctttgtggagaaatgtattcgagcagtggagaagagaggtctggac
atggatggactctacagagtcagtgggaatctagctgtcattcagaaactacgcttcaag
gcagatcatgaggagctggacctggaggatggccagtgggaggacatccacgttattaca
ggggctctgaagctgttcttcagggagcttcctgaaccccttttccccttcagtcacttc
agccgcttcatccaggccatcagaactgttgattaccaccacaaagtgtcttacatgcga
gagcttgttgagtctctccctaggccaaaccatgataccatggaactcctcttcagccat
ttacgcaaagtgatagagtatggagaggagaaccgtatgactgtgcagaacgtggctatt
gtctttggtcccacgctgctccggccagagatggagtcagccaacattgccatgcacatg
gttttccagaaccagatagtggagctaatcctcaaccaatacgaatacattttccattcc
agttga
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