Oncorhynchus kisutch (coho salmon): 109900122
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Entry
109900122 CDS
T09179
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent translocase ABCB1-like
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109900122
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oki02000
]
109900122
Transporters [BR:
oki02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
109900122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_21
AAA_16
RsgA_GTPase
AAA_28
AAA_5
AAA_25
Rad17
DUF5862
Zeta_toxin
AAA_29
Motif
Other DBs
NCBI-GeneID:
109900122
NCBI-ProteinID:
XP_031677003
LinkDB
All DBs
Position
Unknown
AA seq
939 aa
AA seq
DB search
MGREDGDMPDSLPTIPEEVFAKGYPNLAFHEDKKPQERMTEGQPTVDTERKPKKGLGRKK
KEPAKAVGFFQLFRYATGCEVLLMIIGLLCAALHGIALPLMCVVFGQMTDSFVQSGQQLN
LTANFTVEEISALLNSTDGCIQIPGVDIEALMTRHAYYFIGIGCAVFLLGTFQVMLFLLT
ATKQTKRIREKYFHAILHQQMSWFDTHQIGVLNVRLTDDINTINEGLGDKICVFVQFFCT
FLSGFIIGFIFGWKLTLVILAVSPLLAGSAAVWSKILATLTSKELSAYAKAGAVAEEILV
AIRTVVAFNGQKKAVERYERNLEEAKNFGIKKAITTNVSMGFTQFVIFGTYALAFWYGTK
LSVDEPENYTIGKTITVFFSVMIGAFSLGQGAPNLEAIAKARGAAYEVYNTIDQPRPIDS
SSKEGHKPDCVRGDIEFKNIHFSYPSRKDVKILQGVNLTVPRGKTIALVGASGCGKSTTI
QLLQRFYDPDSGEITLDGRDIRTLNVKWLRENMGIVSQEPVLFGTTIAENIRYGREDATD
EDIERAVREANAYDFISKLPDKLNTMVGERGAQLSGGQKQRIAIARALVKNPKILLLDEA
TSALDTQSESVVQAALDKARAGRTTIVIAHRLSTIRTADVIAGFSNGEVVEQGTHRELMA
KKGVYYSLVMQQSQGKPEEDEEDPVEEDNPPKYEDLDSVLYDSSDMDELEVGNEEGIENG
GFEKNSISSGRVEMKPTRRKSKKSKKDKKKENKPDEAPDIPFTRILALNKPEWPYMLVGT
LSSLVGGAVYPCVAIIFAKIIGVFSEVDPEVKRQKTMMFSLLFLLIGGVXFVTYFLKGYM
FGKSGELLTMRLRRQVFHAMMRQEIGWFDDNNNAVGVLTTRLATDASLVKGATGSRLGLA
TNTVCALTIAIVVAFIHSWQLTLLSSPVCPSSLEPTSFR
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggggagagaggatggggacatgccagactctctaccaaccatccctgaggaggtattt
gcaaaaggctaccccaacctggccttccatgaggataagaagcctcaggagcggatgaca
gaggggcagccaaccgttgacacggaacgcaagccaaagaagggcctcggaaggaagaaa
aaagaaccagccaaagcagtgggatttttccagttgttccgctacgctactggttgtgag
gtgctcctgatgataatcggcctgctatgtgctgccctccacgggatagccctgcccctt
atgtgtgttgtgtttggacagatgaccgacagctttgtacaaagtggacagcagctcaac
cttacagccaatttcactgtggaggagatcagcgctttattgaactcaactgacggatgt
attcaaattcctggagttgatatagaggctctaatgactcgacatgcctattacttcatt
gggatcggttgtgctgtgttcctgctggggacctttcaggtgatgttgttcttgttgaca
gccaccaaacagaccaaacggatcagggagaaatacttccatgccatcctccaccaacag
atgtcctggtttgatacacaccagataggagttctcaacgtcaggttaacagatgacatc
aacacaatcaacgaaggccttggagacaagatctgtgtgttcgtgcagttcttctgcacc
ttcttgtcagggttcatcattggtttcatcttcggctggaagctaaccctcgtcatcctg
gccgtcagtcctctcctggcaggatcagctgccgtctggtccaaaatacttgccaccctg
accagtaaggagctgtctgcctatgccaaagcaggggcggtagctgaagagatactggtg
gctatcaggacagttgtggctttcaatggacagaagaaagctgtggaaaggtatgaaaga
aacttggaggaggctaaaaactttggaataaagaaggccatcaccactaacgtgtccatg
ggcttcacccagtttgtcatatttgggacgtacgccttggctttctggtacgggaccaag
ctctctgtagacgagcctgaaaactacaccattggaaagaccattacagtcttcttctca
gtgatgattggggcgttctctttgggccagggtgcgcctaacttggaagccatcgccaaa
gcccggggtgctgcctatgaagtctacaataccattgaccagccgcggcccatagacagc
agttcaaaggaaggtcacaaaccagactgtgtgagaggagacattgaattcaagaacatc
cacttcagctacccctccaggaaagatgtcaaaattcttcaaggagtgaatctgacagtg
cctcgtgggaagaccatagctctggttggagccagtggatgtgggaagagcaccaccatt
cagctactgcagcgcttttatgatccagactcaggagagattaccctggatggtcgggac
atccggaccctgaatgtgaagtggctgagggagaatatgggtatcgtcagtcaggaacct
gtgctattcggaacaaccattgcagaaaacatccgctatggcagagaggatgccacagat
gaggacatcgaacgggccgtgagggaggccaacgcgtacgacttcatctccaaactcccc
gataagctgaacaccatggtgggggagcggggagcccagctcagtggaggacagaagcag
aggatagctatcgcccgggccctggtcaaaaacccgaagatcctcctgctggacgaggcc
acctccgccctggacacccagagtgagtcggtcgttcaggccgctctggataaggccaga
gcgggccgcaccacaatagtgatcgcccaccgcctgtccaccatcagaacagctgacgtg
atcgctggcttcagcaacggagaggtggtggagcagggaacacacagggaactcatggcc
aagaagggggtttactactctctggtcatgcagcagagtcaagggaagccagaggaagat
gaagaggaccctgtggaagaggacaaccctcctaaatatgaggatctggattcggtccta
tatgactcatctgacatggatgagctggaagtgggaaacgaggaaggaatagaaaatggc
ggctttgaaaagaactcaatcagcagcggccgtgtggaaatgaaaccaaccaggaggaaa
tctaagaagtccaagaaggacaagaagaaggaaaataaaccagatgaagctccagacatc
cccttcaccagaatcctggccttgaacaagcccgagtggccgtacatgttggtaggaacc
ctgtctagcttggtggggggagccgtttatccctgtgtcgccatcatcttcgccaagatc
attggggtgttttccgaggttgacccggaagtcaaacgacagaaaaccatgatgttttcc
ctgctcttccttctcatcggaggagtgngctttgtcacctacttcttaaagggttacatg
tttggaaagtcaggagagcttcttaccatgaggctgaggaggcaggtattccatgccatg
atgagacaggagattggatggtttgatgacaacaacaatgcagtgggagttttaaccacc
agattggccaccgatgcatctctggttaaaggggcgactgggtctaggttgggtctggcc
accaacacagtctgtgctctcaccatcgccattgtggtggccttcatccacagctggcag
ctcaccctcctatcctcgcctgtgtgcccttcctcattggagccaacttcattcagatga
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