Oncorhynchus kisutch (coho salmon): 109900186
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Entry
109900186 CDS
T09179
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109900186
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
LRR_8
PDZ_6
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_9
LRR_LRWD1
DUF4642
Motif
Other DBs
NCBI-GeneID:
109900186
NCBI-ProteinID:
XP_031691905
Ensembl:
ENSOKIG00005003041
LinkDB
All DBs
Position
LG11:62080058..62180024
Genome browser
AA seq
2093 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCNLQNVPDEIFRYSRSLEELLLDANQLRDLPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKALEIADFSGNPLSRL
PDGFTQLRGLAHLALNDVSLQTLPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQLD
LGSNELEVLPDTLGALPKLRELWLDRNQLSSLPPELGNLRRLVCLDMSENRLEELPSELS
GLLALTDLLLTQNLLEVVPDSIGSLKQLSILKVDQNRLTHLSDSIGECENLTELVLTENL
LQTLPRSLGKLKKLTNLNADRNRLGGVPDELGGCASLNVLSLRDNRVAKLPAQLADATEL
HVLDVAGNRLQNLPFALANLNLKAMWLAENQSQPMLKFQTEDEESTGEKVLTCYLLPQQP
SSSLENLLQNSVDDSWTDSNLNRVSVIQFQEETTKQEAEDDEAAAERRGLQRRATPHHSE
LKVMKKGIEERRNEAYTSRADGETESPGAEEKRLSDLSNQSHDSAASNSTASANSHEERR
GLMTTDLVGGRGPQEVEALDEMEVEYIEPTVHFAEEPMYRGGDDDEEGEDGVPHGYEEEQ
QRPQFPTEKQRLIRKDTPHYKKHFKITKLPKPEAVAALLQGFSPDAHLAQHPASHHTAPE
EEEEEEEEEEEEEEEGEEGEECMVTPQRHNRIEEPELEDRSLLHANSSLQPVKGVSFDQV
NNLLIEPARIEEEEHNLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEDGPAARA
GVKVGDKLLEVNGVALQGAEHHTAVEALRSSGTAVSMSVIREHMVEPENAITTTPLRPED
DYFPRERRASGLPFCMEASSPAGPRHRRSTCLVRNDKGLGFSIAGGKGSTAYRTGDLGIY
ISRIAEGGAAHRDSTLRVGDRVITINGVDMTEARHDQAVALLTGTSPTIALLVERDQAEP
GTAGGSPGLSRARAHSPPPPEPSDSPDQEEGNDDSPHGTHLSRPLQDEYPIEEVMLVKAG
GPLGLSIVGGSDHASHPFGVSEPGVFISKVIPHGLACQSGLRVGDRILEVNTIDLRHATH
QEAVKALLSNKQEIRMLVRRDPSPPGMQEIVIQKQTGEKLGISIRGGAKGHAGNPFDATD
EGIFISKVSSSGAAARDGRLLVGMRILEVSNHSLLGMTHTEAVRVLRAVGDTLFMLVCDG
FDPGNAAAIEASPGIIANPFAAGIVRKNSMESISSIDRDLSPEEMDILQKEVEMARETSQ
WEREEVERMRLEREEATRLLEEETENLGTGPLNLDYRTLAALPTTALQKVNRFAPSVCVT
AFMEAPLQTQCSAPLEPLGFGLGQPSTSLYHVDPHALPQSCPTMITEAEHLYMSQHSPSP
AITSFNQEAARQEAPPTGEDEEEEILVDSQPINFSENPFLVANRKGKGRPPSECILSGPP
MGYGSGGKLQPWLFSKAPSTEHPRTDSPIRDAPYSPSTQPPSAHSSTSSLCAGRETRFAS
IHFPPTALPAKNNSPLSPYETRPGSIQPLSRGGGRPSTSPGTPDGHSRDGHSSPNPFQHG
PSPINSQTSLQPRAPSPDTIDEFSLNPKQAYKAFAAVPHSLAMLEPPLQDLYGQRNNIHS
NLPSPSLEPELNNEVFEDEVEGDGGLGGGLAAHVSPRPSLTSDRRDYMSLAAVPRLSRAS
MDMVVKTPSPGGRDSPEQRSFRDRQKYFEIDMKQQTPDSKPKGRVSLVGADDLKKMREEE
ERRFEQRAREYLMDDDDEEEDDLVTQMGVLKATGKVLLDGVEYKVEPVATPPRHYNTPPS
YSATPPSYCGSSGPSSVDGKGDSQRNSLEESFRLDQQRPNSMTGLIPVYPGESGAPIRTA
KAERRQQERLRMQSPELAPAGDKDLSPAEKRALEAEKRAMWRAARPYGLEEDVRQYEQDL
AKRLYQSRVRASQGTVPPPQPQNAAASSAASQLRMKSLEQDALKAQMVIAKSREGKKRGT
LDQLAESPSPAPTPSPTPLEDFSPRGVTSPGRLSLSEKKFDYRQFAAIPSSKPVYDIQSP
DTVDDFQFIDDGSSNPVPAEVPTATSTLEEMALYRNKRKLRQGRRSLETAVPT
NT seq
6282 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccctttgtggcgctgtaaccgccacgtcgagtcggtggacaagcga
cattgcaatttgcaaaatgtccctgacgagatattccgctacagccgcagtctggaagag
cttctcctcgacgccaaccaactcagagatttacccaagcctttctttagacttctgaac
ctgcggaagctgggcctgagtgacaatgagatccagaggctccctcctgaggtggccaac
ttcatgcagctggtggagcttgacatctccagaaacgacattcctgagatccccgagagc
attaagttctgcaaggcgttggagattgcagacttcagtggaaaccccctctccaggttg
cctgatggtttcactcagctgcgagggctcgcccacctggccctcaacgacgtgtcactg
cagacactgcccaacgacataggaaacctggccaacctggtgacgctggagctcagggag
aacctgctcaagtccctgcccacgtcgctctcttttctggtgaaactggaacagctggac
ctgggcagcaatgaactggaagtgttgccagacacacttggtgctctccctaagctacgg
gagctgtggttggaccgtaaccagctctcctcattgccaccagagctggggaacctgcgg
aggctggtgtgtctagacatgtcagagaaccgcctggaggagttgccctcggagctgagc
ggcctgctggccctcactgacctgctgctcacacaaaacctcctggaggtggtccctgac
agcattggctctctgaagcagctgtccatcttgaaagtggaccagaaccgactgacccac
ctgagcgactccataggggagtgtgagaacctgacggaactcgtgctgaccgagaacctc
ttacagactctgcctcgctcgctgggcaagctgaagaagctgaccaatctgaatgcggac
cgcaaccggctgggcggcgtgcccgatgagctgggcggctgcgccagcctcaacgtgctc
tccctcagggacaaccgtgtggccaagctgcctgcccagctggccgacgccaccgagctc
cacgtgctagacgtggcagggaacaggttacagaacctcccgtttgccctggccaacctc
aacctgaaggccatgtggctggcagagaaccagtcccagcccatgctcaagttccagacg
gaggatgaggagagcaccggggagaaggtgctcacctgctacctgctaccccagcagcct
tcctctagcctggagaacctgctccagaacagtgtggacgacagctggacagacagcaac
ctgaaccgcgtgtctgtcatccagttccaggaggagaccaccaagcaggaggcggaggat
gacgaggcggccgcggagcgcaggggtctccagcggcgggcgacaccacaccacagtgag
ctgaaggtgatgaagaaagggattgaggagaggaggaacgaggcctacacttccagagcg
gatggagagactgagtcccctggtgctgaggagaagcggctgagtgatctgtccaatcag
agccacgactctgcggcgtccaacagtacggcctcggccaactcccacgaagagaggcgg
ggcctgatgaccacagacctggtgggtgggcgtgggccccaggaggtggaggcgctagat
gagatggaggtggagtacatagagcccacggtgcactttgcagaggagcccatgtaccgg
ggtggggacgacgatgaggagggtgaggatggggtcccacacggctacgaagaggaacaa
cagaggccccagttccctacggagaagcagcgtctgatcaggaaggacacgccgcactac
aagaagcacttcaagatcaccaagctgccaaaacccgaggcggtggccgcgttactgcag
ggcttcagccccgacgctcacctggcccaacacccagcctcgcaccacactgcccctgag
gaggaggaagaagaggaggaggaggaagaggaggaagaggaggaaggggaggaaggggag
gagtgtatggtaactccacagcgccacaacaggatagaagagccagagctggaggatagg
agtctgcttcatgccaactcctccctgcagccggtcaagggggtgtcatttgatcaagtc
aataatctgctgattgagcctgctcgaattgaggaggaagagcacaacctgaccattcta
cggcaaactgggggtctgggcatcagcatagccggaggaaagggatccacaccctacaag
ggggatgatgagggcatcttcatctccagggtgtctgaggacggacctgcagcccgggct
ggggtcaaagtgggagacaaacttctcgaggtgaacggcgtggccctccagggtgctgag
caccacacggcggtggaagccctgcgcagctcgggcaccgccgtctccatgagcgtcatc
cgggagcacatggtggagccggagaacgccatcaccaccacgccgctgaggcccgaggac
gactacttcccccgggagagacgggccagcgggctgcccttctgcatggaggccagctcc
cccgcaggcccccgacacaggcggtctacctgcctggtccgcaacgacaagggcctgggc
ttcagcatcgccgggggcaagggctccacagcctaccgcacgggggacttggggatctac
atctcccgaatcgcagagggaggggcggcccaccgagacagcacgctccgcgtcggggac
agggtcatcacgatcaatggtgtagacatgacagaggccaggcatgaccaggcagtagcg
ctgcttaccggcacctcccccaccatcgccctcctggtggagcgcgaccaggccgagccg
ggcaccgcagggggctccccgggcctgtcccgcgcccgcgctcactcccccccaccccca
gagccctccgactcacccgatcaggaggagggcaacgacgactcgccccatgggacccac
ctgagccggccgctgcaggacgagtaccccatcgaggaagtgatgttggtgaaggcgggc
ggccctctgggactgagcatcgtgggaggcagcgaccatgccagtcatccgttcggcgtc
agcgagcctggtgtcttcatctcgaaggtgatcccgcatggcttggcgtgtcagagtggg
ctgcgggtcggggacaggatactggaggtgaacaccatcgacctgcgccacgccacccac
caggaggctgttaaagccctgctctctaacaaacaggagatccgcatgctggtgcgcagg
gacccctcaccgccggggatgcaggagatagtgatccagaagcagactggagagaagctg
ggcatcagcatacgtggcggtgccaaaggccacgctggtaaccctttcgacgccaccgat
gagggcatcttcatatccaaggtgagctccagtggtgcagcggccagagacggccgtctg
ctggtgggcatgcggatcctggaggtgagcaaccacagcctgctgggcatgacccacacg
gaggccgtgcgtgtgctccgcgccgtgggagacaccctgttcatgctggtgtgtgacggc
ttcgacccaggcaacgctgccgccatagaggcgtcgccgggcatcattgccaacccattt
gcggcgggcatcgtgcgtaagaacagcatggagagcatctcctctatagaccgagacctg
agtccggaggagatggacatcctacagaaggaggtggagatggcgcgagagacgtcccag
tgggagagagaagaggtggagcgcatgcgcttggagcgtgaggaggctactcgcctgcta
gaagaggagaccgagaacctgggcactggacctctgaatctggattaccggacgctggct
gcactgcccaccaccgctctgcagaaggtcaacaggttcgctccctctgtctgtgtgact
gccttcatggaggcccccctgcagacccaatgttctgcccccttagagcccctgggcttt
ggcctggggcagccctccacctccctctaccacgtggacccccatgctttgcctcagtcc
tgccccactatgatcacagaggccgagcacctctacatgtcccagcactctcccagtccc
gccatcacctccttcaatcaagaagcagctagacaggaagccccgcctaccggtgaagat
gaagaggaggagattctggtggactcccagccaattaacttcagcgagaaccccttcctg
gtggccaatcgcaagggaaagggccgccccccctcggagtgtatcctatcaggacctccc
atgggctacgggagcggtggcaagttgcagccctggttgttcagcaaggcaccctccact
gagcaccccaggacagacagtcccattagagatgccccctactcacctagcacacaaccg
cccagtgctcattcctccaccagttccctgtgtgcaggcagggagacccgcttcgcaagc
attcatttcccccccactgcactgcctgccaagaataactctccattgagtccctatgag
acgaggccgggttccatccagccactctcccgtggtggcgggcggccaagcacctcgcca
ggcactccggacgggcacagcagagacgggcacagcagtcccaaccccttccagcatggc
ccctcccccatcaactcccagacctctctgcagcctcgtgccccctcccctgacacaatc
gatgagttctccctgaaccccaagcaggcatacaaggcgtttgccgccgtgcctcactcg
ctggccatgctggagccgccgctgcaggacctgtatggccagaggaacaacatccactcc
aacctgccttctccttctctagagcctgagctgaacaacgaggtgtttgaggatgaggta
gagggggacggaggactaggtggaggtctggcagcccacgtctctccccgaccctccctc
acctctgaccgtcgggactatatgagtctggcagcagtgccacgcctctccagagcctca
atggacatggtcgtaaagacgccatctcctgggggcagagacagcccagagcaacgctcc
ttcagggacagacagaagtactttgagatcgacatgaagcagcagacgcccgacagcaag
cccaaaggccgcgtgtccctggtgggagcagatgacctgaagaagatgagggaggaggaa
gagaggagatttgagcagcgggcgcgggagtacctgatggatgacgatgatgaggaggag
gacgacctggtgacgcagatgggagtgttgaaggccacgggcaaggtgttgctggacggg
gtggagtacaaggtggagcctgtggccacgccccccaggcactataacacgccccccagc
tacagcgccacgccccctagctactgtggcagctcagggccttcgtcagttgatggtaaa
ggagactcccagaggaattccttagaggagagcttcaggttggatcagcagcggcccaac
tccatgactggtctgatcccagtgtaccctggagagtcgggggctcccatccggacggcc
aaggcagagcggaggcaacaggagcggctgaggatgcagagtccagagctggccccggcc
ggagacaaggacctgtcccccgccgagaaacgggctctggaggccgagaagagagccatg
tggagggcagcaaggccctatggcctagaggaggatgttaggcagtatgagcaggacctg
gctaagaggctctaccagtcgcgagtgagggcgtctcagggcaccgtgccgccccctcag
ccccaaaacgctgccgcttcctccgctgcctcccagctcaggatgaagtctctggagcag
gatgctctgaaggctcagatggtcatcgctaagtctcgggagggaaagaagcgtggcaca
ctagaccagctggccgagtcaccctcgcccgcccccacgccatcccctacccctctggaa
gatttcagtcccagaggagtgacgtcaccaggcagactgtccctgtcggaaaagaagttt
gactaccgacagtttgctgccattccttcttccaaacccgtatacgacatccagtcccct
gacacggtcgacgactttcagttcattgacgacggctccagtaaccctgtgcccgctgag
gtccccactgccacctcaacgctggaggagatggccctctacagaaacaagcgcaagctg
aggcagggccgccgcagcctggagaccgccgtgcccacataa
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integrated database retrieval system
