Oncorhynchus kisutch (coho salmon): 109900235
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Entry
109900235 CDS
T09179
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04080
Neuroactive ligand-receptor interaction
oki04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109900235
04082 Neuroactive ligand signaling
109900235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109900235
Ion channels [BR:
oki04040
]
Ligand-gated channels
GABA-A
109900235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Ig_GpJ_C
Motif
Other DBs
NCBI-GeneID:
109900235
NCBI-ProteinID:
XP_020351515
Ensembl:
ENSOKIG00005002522
UniProt:
A0A8C7CK52
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Position
LG12:complement(18619256..18653727)
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AA seq
474 aa
AA seq
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MSTDVLLLLLLVWVVGASGRSIGPRGHVRQTYSQIRFKREVPSTVQGRQKVSSPILRRSP
DMTKTTMTKSEQLLSINDHDFTMRPGFGGHTVEVGVDVQVESLDTISEVDMDFTMTLYIR
HYWKDERLSFHSTTNKSMTFDGRLVKKIWVPDLFFVHSKKSFTHDTTTDNVMLRVYPDGK
VLYSLRVTVTSMCSMDLSRFPLDTQTCSLEIESYAYTDDDLMLYWKKGNNSLSTDERISL
SQFLIQEFHTTSKKSFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWI
DRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAV
NYLSTVQERKERKLRERLPCTCGMTHPGMMGSYSEDNVNNTGNYGGESMENGAAMQQRMM
VHLDFEENDQITGHVGSSAYSSMWIDTHAIDKYSRVIFPGSYILFNIIYWSCYL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtccacggatgtcctacttctgctgctacttgtctgggtggtcggtgcttctgggagg
tcaattggtccgaggggacacgtgcgccagacctacagccaaatcagattcaaacgagaa
gtaccatcgactgtacaaggacgtcaaaaagttagcagccctatactgagaagaagtcca
gatatgaccaaaaccaccatgacaaagtcagagcagctcttaagcataaatgaccacgac
ttcacaatgaggcctggctttggaggacacactgttgaagttggagttgatgttcaggta
gaaagtctggacacaatttcagaagttgacatggacttcaccatgaccctgtatattagg
cactactggaaagatgagcgcctttctttccacagcaccaccaataagagcatgaccttc
gacgggcgcctggtcaagaagatctgggtgcctgacctgttctttgtccactccaagaag
tctttcacacacgacaccaccacagataatgtcatgctgagagtctaccctgatggcaag
gtgctctacagcttaagggtgacggtgacatccatgtgcagtatggacctgagtcgcttc
cctctggacacacagacctgctccctggagatcgagagctatgcgtacacggatgacgac
ctgatgctctactggaagaaagggaacaattccctgagtactgacgaaaggatctccctc
tcccagttcctcatccaggagttccataccaccagcaaaaaatccttctacagcagcaca
ggctggtacaaccgtctgtacatcaacttcaccctgcgacgccacatcttcttcttcctg
ctgcagacctacttccctgccactctgatggtcatgttgtcctgggtgtccttttggatc
gaccgccgggccgtaccggccagggttcctctgggtatcaccacggtgctcaccatgtcc
accatcatcactggagtcaacgcctccatgcccagggtttcctacatcaaagctgtggac
atttacctctgggtcagttttgtgtttgtgttcttatcggtgatagagtacgctgcagtg
aactacctgtctacggtgcaagaacggaaggaaagaaagctacgagaaaggctgccctgc
acctgtggcatgacccacccaggcatgatgggtagctacagcgaggataatgtcaacaac
actgggaactatggcggtgagtcaatggagaacggcgctgcaatgcagcaaaggatgatg
gtccacctggactttgaggagaacgaccagatcacaggacacgtgggctccagcgcttac
agcagcatgtggatcgacacccacgccatagacaagtattcccgggtcatcttccctggg
tcctatattctgttcaacatcatctactggtcctgctacctctaa
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