Oncorhynchus kisutch (coho salmon): 109900392
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Entry
109900392 CDS
T09179
Symbol
plcb4
Name
(RefSeq) LOW QUALITY PROTEIN: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00562
Inositol phosphate metabolism
oki01100
Metabolic pathways
oki04020
Calcium signaling pathway
oki04070
Phosphatidylinositol signaling system
oki04081
Hormone signaling
oki04082
Neuroactive ligand signaling
oki04261
Adrenergic signaling in cardiomyocytes
oki04270
Vascular smooth muscle contraction
oki04310
Wnt signaling pathway
oki04371
Apelin signaling pathway
oki04540
Gap junction
oki04621
NOD-like receptor signaling pathway
oki04912
GnRH signaling pathway
oki04916
Melanogenesis
Module
oki_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
109900392 (plcb4)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109900392 (plcb4)
04371 Apelin signaling pathway
109900392 (plcb4)
04020 Calcium signaling pathway
109900392 (plcb4)
04070 Phosphatidylinositol signaling system
109900392 (plcb4)
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
109900392 (plcb4)
04081 Hormone signaling
109900392 (plcb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
109900392 (plcb4)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
109900392 (plcb4)
09152 Endocrine system
04912 GnRH signaling pathway
109900392 (plcb4)
04916 Melanogenesis
109900392 (plcb4)
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
109900392 (plcb4)
04270 Vascular smooth muscle contraction
109900392 (plcb4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109900392 (plcb4)
Enzymes [BR:
oki01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
109900392 (plcb4)
Membrane trafficking [BR:
oki04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
109900392 (plcb4)
Endocytosis
Macropinocytosis
Phospholipase C
109900392 (plcb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PH_14
PI-PLC-Y
PLCB1-4-like_EFh
EF-hand_like
PLC-beta_C
C2
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
109900392
NCBI-ProteinID:
XP_031693374
Ensembl:
ENSOKIG00005034599
LinkDB
All DBs
Position
LG12:complement(37944530..38107176)
Genome browser
AA seq
1226 aa
AA seq
DB search
MTKSYEFNWQKHLPGFMQEGASFDRFDEDPFLFEPNCLVKVDEFGFFITWKSDGKEGQVL
ECSLINSIRVGAVPRDPKILSSFEAAGKKEEELEGCVICVCSGTDLVNLSFMYMVADSPD
TARKWTEGLRSVIHNFRANNVCPMTCLKKHWMRMCFLTNVNGKIPVRTITRTFASGKTEK
GIFQALKELGLPSGKNDEIEHAAFPFDIFYALTQKICPRTDIEELFKKINGDKSDFLNVD
QLVSFLNENQRDPRLNEILFPFYDPKRAMQIIEKYERDPDLKKKGRMSSDGFCRYLMSDE
NAPVFLDCLELYQDMEQPLAHYFIASSHNTYLNGRQFGGKSSVEMYRQVLLSGCRCVELD
CWDGKGEDQEPIITHGKAMCTDILFKDVISAIRETAFVTSEYPVILSFENHCSKPQQYKM
ARYCEEIFGEYLLRHPLEGFPVEAGRPLPSPNDLKRKILIKNKRLKPEVEQKQLESFKKH
MEAGETNTPAILLGAETEEDVENALGDVKDVIPDLKTCTSEEPSEENSLSTSVSVSDSVN
KDGEERERDNSIKKVVEEDPTEMSEATEATDATDISEASEDNNNKKTGETTDDEEALIAS
YTYVGATTNIHPYLSAMVNYAQPVKFQSFDVAEERNIHHNMSSFNESVGLGYLKTNAIEF
VNYNKRQMSRIYPKGGRVDSSNYMPQIFWNAGCQMVSLNYQTPDLAMQLNQGKYEYNGSC
GYLLKPDFMRRSDRMFDPFSETPVDGVIAATCSVQVFSGQFLSDKKIGTYVEVDMYGLPT
DTIRKEFRTRMVMNNGLNPAYNEEPFVFRKVILPDLAVLRIAVYDDNNKLIGQRILPLEG
LQAGYRHXSLRNEGNKPLSLPTVFCNIVLKTYVPXGFGAIVDALSDPKKFLSIAEKRADQ
MRALGIETSDIADVPNESSKNDKKGKVNANVKTNVTPQTSSDPAQSSKSAQNNTTETKKD
TNTLVPHVNIDDLKQMKTYLKLTKKQQKDLNSLKKKHAKDCTIMQKSHCTQVDKMIALHD
KEKQTQEKLLEKAIKKRGENNCLELKKETESKVENLTTDHKAKVKDITAQHTKEWSEMIN
SHSSIEQDMKDIHVVQQCENLKKLLSGVQEQQTLSLKLIHERQSKEMRANQAKTSMENSK
AISQDKTIKNKAERERRVRELNSSNTKKFLEERKRLAMKHQKEMETLEKSQKEQLEELDK
FNEQAKDIQQMVKLEEEMDRRPATVV
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgactaagtcctatgagtttaattggcagaagcacctgcctggcttcatgcaggaagga
gcttccttcgacaggtttgacgaggacccgtttctgtttgagcccaactgtctggtcaaa
gtggacgagtttggcttcttcatcacgtggaagagcgacggaaaggagggccaggttcta
gaatgttctctgatcaacagtattcgagtcggagccgtgccaagggaccctaagattctg
tcttcgttcgaggcagcggggaagaaagaggaggagctggagggatgtgtcatctgtgtc
tgtagcgggaccgatctcgtcaacctctccttcatgtacatggtggctgacagcccagac
acagctaggaagtggacggagggtttgaggtcagtgatccacaatttcagagccaataac
gtctgtcctatgacctgcctcaagaaacattggatgaggatgtgctttctgaccaatgtg
aacggcaagatcccagtgagaaccatcacacggacatttgcgtctgggaaaacagagaaa
ggaatctttcaggctctgaaggaactggggctgcctagcgggaagaacgatgagatagaa
cacgcggcgttccccttcgacatcttctatgccctgactcagaagatctgccctcgtact
gacatcgaggagctcttcaagaaaatcaatggggacaaaagtgattttttaaacgtagac
cagttagtcagctttctgaatgaaaaccagcgcgacccgcggctaaatgagatcctgttc
cccttctacgaccctaaacgagccatgcagatcatcgagaagtacgagagagaccccgac
ctcaagaagaaaggccgtatgtccagcgatggcttctgcaggtacctgatgtcagatgag
aatgccccggtgttcctggactgtctggagctgtaccaggacatggaacagcctctggcc
cactacttcatcgcatcctcccacaacacctacctgaacgggaggcagttcggagggaag
tcctccgtggagatgtacagacaggtgctgctctccggctgcaggtgtgtagagctggac
tgctgggatgggaaaggagaagaccaggagcctatcatcactcatggcaaggccatgtgt
actgacatcctcttcaaggacgtgatctcagccatcagggaaactgcctttgtgacgtct
gagtatcccgtgatcctgtcatttgaaaaccactgcagtaaaccccagcagtataagatg
gctcgctattgtgaggagatctttggagaatacctactgaggcatccccttgagggattc
cctgttgaggcgggtcgtcccttgccttctcccaacgatctcaaacgcaaaatcctcatc
aaaaacaaacgcttgaaacccgaggtggaacagaagcagttagagtcttttaagaagcac
atggaggcaggagagaccaacacaccagccatcttactaggagcagagacagaggaagat
gtggagaacgctctaggtgacgtgaaggatgtgattcctgacttgaagacgtgtacatca
gaggaacctagtgaagagaacagcctcagcaccagtgtcagtgtcagcgacagtgtgaac
aaagacggagaggagagggagagggacaacagcatcaaaaaggtggtggaggaggatccg
acagagatgtctgaggccacagaagcaacagacgccacagacatctccgaggcgtctgag
gataacaacaacaagaagactggcgagacgacggatgacgaggaggctctgattgcctcg
tacacgtacgtaggagccaccaccaacatccacccctacctctctgctatggtcaactac
gcacagcctgtcaagttccagagcttcgacgtcgcagaagagaggaacatccaccacaac
atgtcgtcatttaatgagtcagtgggtctgggttatctgaagaccaacgccatcgagttt
gtcaactacaacaagcgtcagatgagtcggatctaccctaaaggaggcagggtggactcc
agtaattacatgcctcagatcttctggaacgcaggctgccagatggtctcccttaactac
cagaccccagatttggctatgcagttgaaccagggaaagtatgagtacaatggatcctgt
gggtatctgttgaagccagacttcatgcgtcgctcagacaggatgtttgaccccttctca
gagacacctgtggacggggtcattgctgctacctgcagtgtacaggtgttctctggtcag
ttcctgtctgataagaagattggaacctacgtggaggtggacatgtacgggctgcccacg
gacaccatccgcaaagagttccgcacgcgcatggtgatgaacaacggcctgaaccccgcc
tacaacgaagagcctttcgtcttccggaaggtgattttaccagacctggctgtgctgcgc
atagctgtgtatgatgacaataataagctgataggtcagaggattctaccgttggagggt
ctacaggcaggatacagacacnattctctacgcaacgaagggaacaagcctctgtcttta
cccaccgtcttctgtaacatagtactcaagacctacgtaccgnaaggcttcggagccatc
gtggacgccctgtcggacccaaagaagttcctgtccatagcagagaagagagcggaccag
atgagagctctggggattgaaacgagtgacatagcggacgtgccaaacgagagttcgaag
aacgacaagaaagggaaggtgaacgccaacgtgaagaccaacgtcacgccacagaccagc
tcggacccggctcagtcctctaagtctgcccagaacaacaccacggagaccaagaaggat
accaacaccctcgtgccgcatgtgaacattgatgacttgaaacagatgaagacgtacctt
aaactgactaagaagcagcagaaagatctgaactctttaaagaagaagcacgccaaggac
tgcaccatcatgcagaagtcccactgcacccaggtggacaagatgatcgctctgcacgac
aaggagaagcagacacaggagaagctgctggagaaggccatcaagaaacgaggagaaaac
aactgtctggagttgaagaaggagactgagagtaaagtggagaacctgaccacagaccac
aaggccaaggtgaaggacatcacagcccaacacactaaggagtggtcagagatgatcaac
tcccacagcagtattgagcaggatatgaaggacatccacgtggtccagcagtgtgaaaac
ctcaagaaactactgagtggagtccaggaacaacagactctctcgctcaaactgatccac
gaacggcagagcaaggagatgcgggccaaccaggccaagacgtccatggagaacagcaag
gccatcagccaggacaagaccatcaagaacaaggccgagagggagaggagagttagagag
ttgaacagcagcaacaccaaaaagttccttgaggagaggaaaaggttggctatgaagcat
cagaaggagatggagacactggagaagtctcagaaagaacagctagaggaactggacaag
ttcaatgagcaggccaaggacatccagcagatggtgaagctggaggaggagatggaccgc
agaccagccacagtggtttaa
DBGET
integrated database retrieval system
