Oncorhynchus kisutch (coho salmon): 109900412 Help Entry 109900412         CDS       T09179                                  Symbol dchs2 Name (RefSeq) protocadherin-23 isoform X1   KO K16507   protocadherin-16/23 Organism oki  Oncorhynchus kisutch (coho salmon) Brite KEGG Orthology (KO) [BR:oki00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:oki04515]     109900412 (dchs2) Cell adhesion molecules [BR:oki04515]  Cadherins   Cadherin related    109900412 (dchs2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_CELSR2_9th Cadherin_2 Fibulin_C Cadherin_4 CADH_Y-type_LIR Motif Other DBs NCBI-GeneID:  109900412 NCBI-ProteinID:  XP_031693478 Ensembl:  ENSOKIG00005019686 LinkDB All DBs Position LG12:complement(45087135..45145428) Genome browser AA seq 3294 aa AA seqDB search MSRARISRRNAVTLFQLFAVCLLWERSFTQQVYNLSLSIEEGLPARTIVGDIRAGLQTPS SGFFISESRDSYVFKDLEIDADTGIISTAVVLDRESRDQYEFVAATLTGDVIKVKIVVKD VNDHSPVFSTEKVELNVSELSPPGTRFEFEGAKDQDEGEFGTQGYRITESEMGNIFKVKY REGVGNLFNLDLILTDKLDRETRDFYCLTIEGFDGGIPPKTGLLKVYIHVSDENDNPPVF NQTEYQASVWEDALVMSPVCQVYATDLDLEDNGLVTYEINRRQSDPNEFFVINGTSGVIH VNKPLDFETQPFYELIVRARDNGAQPEYSSTFVALRVLDINDNSPIINVLFLSETGEAEV SEGAGMGEYVARISVSDPDLGEVGRLRVTLEGGDGKFTLKQTDDFLYALCVDGELDREKE GLYELKVVASDFGSPPLKSESTLVLRVTDTNDWRPVFDQDIYTVSVSEDVPQGSSLLSVQ ARDSDDGVNAAILYSILQSDQDHLVNVDPESGLITTAARLDRERETEVRFLMVAVDGGSP AMSSTATITVMVEDVNDNEPVFQQQLYNVSVPEHTQIGNCFLQVVATDVDGRDFGTVRYS ISDGFDKQDTHPLFQINPDSGELCISQDIDRDSGLATYDLLVKAEDQGGLSAQTYVHIEV DDLNDNPPVFNPEKYVTSVSSHAQPGTEVLNVIATDRDSGDYGHVTYQILAGDLSSLFSV DKTTGVVYLTSTLTHLGTASIKLAITAQDSEGVTSARPAEVTVNVLRSAQAPAVFQRSRY AFTVPENALPGTPVGIVEALNPANSVDSLSYRISSGDPHGLFSIHSSSGLISTSHPLDHE SQPYALLVLQCHAGTASPVYSSTQVNVTIADINDNAPVFPKMADTVAVSQNTPPGTVLFI AHAHDADSGANGRVRYFLSRGSARGSVPFYVDADQGTVYLNQSFSRDPRPKYTFEILAKD MGEPSLTATLMLTVNVARSATEDTLAFETLVYQVEMGEGTQIDTRVIQVRAHQSRGSSSH QQGSNPNPVLSYSLEPDPDFPPPPLRVHPASGWLFLSQNLDYETEPMFRFKVLATVQDET TLAMANTTATTNVIVLVLDENDNAPVFTSLAYFFTVQEGPSPQGLVGTVQAVDRDSRKNA QLSYILLSDGKHFRINTKTGEIINWVSLDREQHAGHTLKVMVTDQGQPRLNATATVHILV TDINDNPPQFTHLPASGKELNVQVWAGLPTGSLVTTMFAKDLDAGENATVRFSLTTDEER GHFEIDSQSGDIRSTELFTQNAKTQYTLTVVATDNGAVPLEETAVIHLQVQAAEKQHGGT HPQSVRLFSVREDTKPGTVIGSVHLSPSPITNGRLRYSIAEGDGVLHFGLDSSSGDLYLN QPLDYESTSRYFLVVHGEDATRPGTNVTAFVSVAVEDVNDHVPWFPCEVITLGLLEDVEV GTRVIAFNAKDGDGSLANSGLRYSLAFDPELGRSGGSSLSSTTSSFPFRIHPLTGTLTTT TPLDRERTVSFTFMVTATDQAARAVDRKFATVTTQVFLLDVNDNRPAFVSQDTVLVMEDA EVGSLVHRVVGVDDDVGESGQVTYCLVSGNKEGLFTLEKKTGLLYLASPLDYELQTSHSL TIQASDQGLPSLSSIQTLILEVGDVNDQPPLFQQDVYTASVAENREPGESVVTVSATDKD SEENAAVWYSLLPGPGYDFFSIDPHSGELSTTSQLDRELHQHFTLRVQARDSGVQPLSST STVLCSVLDDNDNVPEFMQASFQLSLPENLPPGVIHTSQASDPDHGANGTITYAIQGEDY GGRFTIHATTGAVSTMRALDREERPSYTLCIQASDSGQPSPLSSSTQLLVLLLDQNDNSP SFHRKSYRSSLAEGLPAGAEVLRLEARDPDQGPNGEVTFSLAEDTLGAFSVEPTTGVIRT TRPLDRESRAQYTFRAVATDGCARGPRSSATAVTVQVEDANDNAPVCTENPIVGWVTVET IPNKIVATVTAVDGDRGANGTVWFSLVENNPFFTINGKSGDIRLNGSISQSFLGANLQVL AADQGRPALTSTCLVIIHVKVEDEPLHFTETLYEAVVVENSKTGAWVGNVVAHDQTDDRR QIEYSIFNGNENGAFAINRHTGDITVWDQASLDYEANRRVHLVVLADGGPMRTAHCRVTV MLQDVNDNAPAFEQGHYRTAVWEGQVHNTYVMQVFASDADSGVNGQIDYSILSGNQNEAF IIDSVRGILATNTVLDREITSSYKLVLQASDRGSPPLSSITTVRVQVVDINDNSPAIPPM EPVVMAENLPVGYMVTEVSANDVDLSSTVTYSFLDNASTAGSFAIDRYTGVVTLTQMLDH EEQTTHRLVVWASDSLHQTTAQVLVQVLDVNDNVPVFSQDSYQVKLPELSPANMLILTVA ATDRDSGLNGKLGYRLLSSPLHGFYIHPDNGSVFTNKPLKYVTNGNVIQLLVEARDWGDP VRSTVTSVDIVVLDANDHTPFFQHDAYTVSPLEDTPVGTTLLTLWAEDLDWEYENTHLDF VIASGNEDRRFCIEVGAVETESQQRTAGSLVLCQLLDRETTEGYILTVIVSDRGSPPLNS SAVVVVTVADVNDNVPAFVSAEYHAQASESSPAGTRLVQVTAQDPDRGTNGLVRYDIISG NSKGHLRLDPHTGALEVNHRLDYEEDSKYALTVQASDGGEPGNRKVAFTVVFVMVLDEND NSPYFIFPVVNCSVPENLPAFTPTCSVHAIDQDAGPYGQLTYSIMSSCFMDYGSGSPDRK EAFAIDSLTGDIHTRQTFDFERESDYCFIVEARDKGEQAATVRVQVAIEGADEFSPVFTQ RQYRFILPENAKAGQTVGHVMAMDHDGGLDGMVEYSLVNPSQLFSIHKTTGAVFVSGPVY RKRGSFSNEDVVELLVTAGSPRMDSRSTTSLVTVNISNSAEALVGVALGVQTVTLGVSLA IFLLLLVSFVALVLRYKTKEAAIKKAAALAANLNTGTFGRTGGAQQHNGIGLRELRAPIT IRVKREISLPIRNSDSSGRGSAEGETAEDHEIKMINEYPCRKRADSAKSRRVPDSGLPKD SDQLSCHSEDGNPGTVITTVSSTCLATGMQSSESLHTFKEEGGGEGMLPRVRVRDMEESM RGYVPLSDSQASVDGSFSSLLCPEEQLRGSYGWDYLLDWEPRYHTLASVFTDISLLPDED LQGGHEGLASEACCLMHPPPLITGVAQPGLRAVPPRMPLSSMHTLTRRPSYPKYAYAPLA RNTGLTPSAMTPSFSPSLSVLTLRTPNASPVVSETGLGVFRLDAGSLLEGEIQV NT seq 9885 nt NT seq  +upstreamnt  +downstreamnt atgtcgagggcaagaattagccgtcgaaatgcggtgactttatttcaactatttgctgtg tgtcttttgtgggagcgctcatttactcaacaggtgtacaacctcagtctctcaattgaa gagggactacctgcgaggactattgttggggatataagagcggggttacagactccaagc agtggattttttatatctgaaagtagagattcttatgtttttaaagacttagaaatagat gcagacactggaataatttcaacagctgtggtgctggacagggagagcagagatcagtat gaatttgtggcagccactctcacaggtgatgtgattaaggtaaaaatagtggttaaagat gtaaatgaccattctcctgtattctccactgaaaaggtggagttgaatgtgtcagaatta agtcctccaggaactcgctttgaatttgagggggctaaagaccaggatgagggtgagttt ggaactcagggttaccgcatcactgaaagtgagatgggaaatatttttaaggtgaaatat cgtgagggggttggaaatctattcaacctggacctcatcctcactgacaaattggacaga gaaacaagagatttttattgcctgaccattgagggatttgatgggggtatcccgcctaaa actgggctacttaaggtttatatccacgtctcggatgaaaatgacaacccacctgtgttc aatcagactgaataccaagcttcagtgtgggaggatgctctggtaatgtcacctgtgtgt caggtctacgccacagatctggacctcgaagacaacgggctcgtaacctacgagatcaac cgccgccagagtgacccgaatgaattctttgtcatcaacggaacttctggtgtcatccat gttaacaaacccttagactttgagacacagccgttttatgagttgattgtcagggcgagg gataatggtgcccagccagagtatagcagcacctttgtagccttgagggtactagacatc aatgacaacagccccattatcaacgtattgtttctgagtgagactggggaagccgaggtg tcggaaggggcaggtatgggggaatacgttgcgaggatatcagtctctgaccccgacctg ggagaggtcgggaggctcagggtcaccctcgaaggtggcgacgggaagttcaccctgaaa cagactgatgacttcctgtacgccttgtgcgtggacggcgagctggacagggagaaagag gggctgtatgagttaaaagtggttgcctctgatttcggtagcccaccattgaagagtgaa agcacattggtgttgagggtcaccgacaccaacgattggcggccggtttttgaccaggac atctacactgtgtctgtatctgaagatgtaccccagggtagttccctactgagtgtgcag gccagagactcagacgacggggtcaacgcagccatcctctactccatcctacagtcagac caagaccacctggtcaacgtcgacccagaatcaggcctcattaccacagcagccaggttg gaccgtgagagggagacagaggtgcggttcctgatggttgcggtcgacggggggtcacca gccatgtcctccacagccaccatcaccgttatggttgaggacgtcaatgacaacgagcct gtgttccagcagcagctgtataatgtgtccgtcccggaacacacccagattgggaactgc tttttacaggttgtggccactgatgtggatggcagggatttcggtacggtacgctactcc atctctgacggctttgataaacaggacacgcaccctctcttccaaatcaacccagactct ggagagctttgcatctcacaggatatcgacagggattcaggcctggcgacctatgattta ttagtgaaagctgaggatcagggaggtttgagtgcccagacgtatgtccacatcgaggtg gatgacttgaacgacaacccgccggtgttcaacccagagaagtacgtgaccagcgtcagc agccacgcacagcccggcacagaggtcctcaacgtcatcgccactgacagggactctggg gactacggtcacgttacctaccagatcctggccggggacctgtcctcccttttctcagtg gataaaactacaggtgtggtctacctgacctccaccctgacccaccttggcactgcgagc atcaagctggctattaccgcccaggacagtgagggtgtgacgtcggcccgacccgcggag gtcacggtgaacgtcctgcgcagtgcccaggccccagcagtttttcagaggtcacgctat gccttcaccgtgcctgagaacgccctgcctggcaccccggtgggaatcgtggaggccctc aaccctgccaactcagtggactccttgtcgtaccgcatctcgtcgggcgacccccacggt ctgttctctatccactccagttcgggcctgatcagtaccagccatccgctggaccacgag tcccagccctatgccctcctggtgctccagtgccatgcgggcaccgcctcgcccgtctac agcagcacccaggtcaacgtcaccatcgctgacatcaacgacaacgcgcctgttttcccc aaaatggcagacaccgttgccgtgtcccaaaacacgcctcccggaacggttctgttcatt gcccatgcccacgacgcagacagtggcgcaaacgggagggtgcggtatttcctgtcacgt ggtagtgctagggggagtgtgccattttatgtggatgccgaccagggtacagtgtactta aaccaaagcttttctcgggaccctcgaccaaagtacaccttcgaaatactggcgaaggac atgggtgaaccttcgctcactgccacgctgatgctcacggtcaacgtggcacgcagtgcc actgaagacaccctggccttcgagacactagtctaccaggtggaaatgggcgagggcacc cagatagacacccgggtcatccaggtgagggcgcatcaaagccgaggaagcagcagccac caacaggggtccaaccccaatccagtcctctcctactccctggagcctgacccagacttt ccccctccacctctccgagtccaccccgcgagtgggtggctctttctctcccaaaacctt gactacgaaacagagcccatgtttcgcttcaaagtcctcgccactgttcaagacgaaaca acactagctatggctaacaccaccgctacaaccaatgttatcgtgcttgtcctagatgag aatgacaatgcaccagtgttcaccagcctggcctacttcttcacggtccaagagggacct tcgccccagggcctggtagggacggtgcaggcggtggaccgagactcaaggaagaacgcg cagctgtcctacatcctgctgtcggacgggaaacacttccgcattaacaccaaaacaggg gagataatcaactgggtgtctctggaccgggagcagcacgctgggcacaccctgaaggtg atggtgacggaccagggccagccccgcctcaatgccactgccaccgttcacatcctggtc accgacatcaatgacaacccaccccagttcacccacctgcccgcctccggcaaggagctc aacgtccaggtttgggcaggcctgcccacaggctcattggtgaccaccatgtttgccaaa gacctcgatgcaggggaaaatgcaaccgtcaggttttctctcaccacagatgaggaacgg ggccactttgagatagacagtcagagcggagacatacggagcacggagctattcacccag aacgccaagacccaatacaccctgacagtggttgccacagacaatggagctgtcccccta gaggagacagccgtcattcacctccaggttcaagctgcagagaaacaacacggcggcacc cacccccaaagtgtgcgactcttctccgtgagggaggacaccaaaccaggcactgtcatc ggctccgtccacctctccccatccccaataaccaatggcagactgcgttactccatcgcc gagggcgacggggtccttcacttcggcctggacagctcgtccggagacctgtacctcaac cagccgctggactatgagtctacatcacgctactttctggttgtacatggcgaggacgcc accagaccagggacgaacgtaactgcatttgtgagcgtagcggtggaggacgtgaacgac catgtgccctggttcccctgcgaggtgatcacgttggggttgctggaggacgtagaagtc ggaacgcgtgtgattgccttcaatgccaaagatggcgatgggagcctggccaacagcggc ctgcgttactcattggcctttgatcctgagctgggcaggtcaggagggtcatcgttgtcc tccacaacatcatcatttcctttccgcatccacccactcaccggcactctcaccacgaca actcccctggaccgcgagaggaccgtgagcttcacgttcatggtcaccgccaccgaccag gcagcaagggcggtcgaccgcaagttcgcgactgtgaccactcaggtgttcctgctggac gtgaatgacaaccgtccggcatttgtctcccaggacacggtcctcgtgatggaggatgca gaggtggggagcctggtgcatcgtgtggtgggtgtggatgatgacgttggtgaaagcggc caggtcacctattgtcttgtctctgggaacaaggaagggctctttactttggagaagaaa acaggtctgctgtacctagcatcccctctggactatgagctccagacctcccactccctg accatccaggcctcggaccaggggctcccctccctctcctctatccagaccctgatactg gaggtaggggatgtgaacgaccagccgcctctgttccagcaggacgtctacacagccagc gttgccgagaacagagagcctggggagagcgtggtcacggtgtccgccacagacaaggac tccgaagagaatgctgcggtgtggtacagcctgttgcccgggccgggctacgacttcttc tccatcgacccccattctggagagctgagtaccacctcccaactggacagggagctgcac cagcacttcaccctcagagtccaggctcgggacagcggcgtccagcccctctccagcaca tccacggtgctatgctctgtgctggacgacaacgacaatgtccccgagttcatgcaggcc tcctttcagcttagcctgccagagaacctgccccccggggtcatccacacatcccaggct tcggacccagaccacggagccaacggcaccatcacctacgccatacagggcgaggactac ggcgggcgtttcaccatccacgccaccacgggcgccgtcagcaccatgcgggccctcgac cgggaggagcggcccagctacaccctctgcatccaggccagcgacagcggccaaccctcc cccctcagctcctccacccagctcctggtgctcctgcttgaccagaacgacaacagtcca tcgtttcaccgcaagagttatcgctcttccttggctgaggggctccccgcaggggccgaa gtgctgcgtctggaggcccgagacccggaccagggtcccaacggcgaggtgacattctct ctggccgaggacaccctgggggccttctcggtagagcccaccacgggggtaattcggacc acccggcccttggacagggagagccgtgctcagtacaccttcagggccgtggccaccgac ggctgcgccagaggtccacggagctccgccaccgcggttaccgtgcaggtggaggatgcc aacgacaacgcgcccgtctgcacggagaaccccattgtcggctgggtcaccgtggagacg atcccaaacaagattgtcgccacggtgacggcagtggacggtgaccgtggtgcgaacggg actgtgtggtttagcttggtggaaaacaacccttttttcaccatcaacggtaaatcggga gacatacgattgaatggttccattagtcagagtttcttgggtgctaacctgcaggtgttg gctgcagaccaggggaggccagctctcacctctacctgcctggtcattattcacgtgaag gtagaggacgagccactgcacttcactgagacgctctacgaagcagttgtggtggaaaac agcaaaactggcgcgtgggtgggaaacgtggtggctcacgaccagaccgacgacagacgg caaatcgagtacagcattttcaacggcaacgagaacggcgccttcgccatcaaccgacac acgggtgacatcacagtgtgggaccaggccagtctagactacgaggccaaccggagggtc cacctggtggtgctggctgacggcggccccatgcgcacagcccactgccgggtcactgtc atgctgcaggacgtcaacgacaatgcgccggcctttgagcagggccactaccgcacggcc gtgtgggaaggccaggtacacaacacctacgtcatgcaggtgtttgcctctgatgcggac agcggtgtgaatggtcagattgattactccatcttgtctggtaaccaaaacgaggcattc atcatcgactctgtgcgcgggatccttgccaccaacactgttctagaccgggaaatcact tcctcttacaagttggtactgcaggcgtcagacaggggtagccctccccttagcagcatc accaccgtccgggtccaggtggtggacatcaacgacaacagtcccgctattccccccatg gagcctgtggtcatggcagagaacctcccagtgggctacatggtgaccgaggtaagcgcc aacgatgtggacctcagctccaccgtgacctacagttttttggacaatgccagcactgcc gggagctttgccattgaccgctacacgggcgtggtgaccctgacacagatgcttgaccat gaggaacagacgacgcacaggctggtggtgtgggcctcggactccctccaccagaccacg gcccaggtcctggttcaagtgctggatgtaaatgacaacgtgcccgtcttctcacaggac tcctaccaggtgaagttgccagaactgtctcctgccaacatgttgatcctgactgtggct gccacggaccgagactctgggcttaacggcaaactcggctacagactcctctcgtcacct ctacacggcttctatatacacccagacaacgggtcggtgttcaccaacaagcccttgaag tatgtcaccaacggtaacgtgatccagctcctggtggaggccagagactggggcgaccca gtccgctctacagtcacctccgtggacattgtggtcctggatgccaatgaccacaccccg ttcttccagcatgacgcttacacggtcagcccgcttgaggatacccccgtcggcaccacc ttgctgaccctctgggcagaggacctggactgggagtacgaaaacacccacctggacttt gtcattgccagtggcaacgaggacaggaggttctgtatagaggtaggtgcggttgaaaca gagagccagcagaggactgctgggagtctggttctgtgccaactcctggaccgtgaaacc actgagggctacatcttgacagtgatagtttctgaccgtggctcgcctccgctcaacagc tcggcggtcgtggtggtgaccgtagcggatgtcaacgacaacgtgccagcttttgtcagc gcagagtaccatgctcaggccagtgagagcagccctgcagggaccaggttggttcaggtg accgcccaggaccctgaccgcggaaccaacggtctggtccggtacgacatcatctcaggc aacagcaagggtcacctcaggttagacccccacaccggcgccctggaggtcaaccaccgt ctcgactacgaggaagactccaagtacgcactgactgtccaggcttccgacgggggcgaa cccggaaaccgtaaagtagctttcaccgtggtctttgttatggtgttggacgagaatgac aactcaccctactttatcttccccgtagtcaactgctcggtgccggagaaccttcctgcc ttcacccccacctgttcagtccatgccatcgaccaagacgctgggccctatggccagctc acctactccatcatgtcctcctgcttcatggactacggcagtggcagccctgataggaag gaggcctttgccattgacagcctcactggggacatccacacccggcaaacctttgacttc gagcgggagagcgactactgcttcatagtggaggccagggacaaaggcgaacaggcggcc accgtgcgggtccaggtggccatcgaaggggcagacgaattcagtcctgtcttcacccag aggcagtaccgtttcattctcccagagaatgccaaggcggggcagacggttggtcatgtt atggccatggaccatgacggaggcctggatggcatggtggagtactcccttgtcaacccc tcacagttgttctccatccacaaaacaacaggcgcagtgttcgtctcgggcccagtgtac cgcaagagaggaagtttttccaacgaagacgtggtggagctcttggtgacagccggcagt cccagaatggactccaggtccaccaccagcctggtaacagtcaatatctccaattcggct gaagctctggtcggggtggccctcggtgtccagacagtcactctgggcgtgtcgctggcc atcttccttctcctactcgtcagtttcgtggcccttgttctgaggtacaagaccaaagag gccgccatcaagaaggccgctgccctcgcagccaacctaaacactggcacgttcggcagg accggcggtgcccaacagcacaacggcatcggcttgcgggagctgagggcgcccatcacc atccgagtgaagagggagatatccctccctatccggaactctgactcaagcggccgcggc tctgcagaaggtgagacggctgaggaccatgagatcaagatgatcaatgagtacccgtgc cgcaagagggccgactcggctaagagcagaagggtccctgactctggcttgcccaaggac tcggaccagctttcctgccattcagaggatggaaacccaggaacggtcataaccacggtc tccagcacatgtctggccacagggatgcagagctccgagagcctccacaccttcaaagag gagggagggggggaggggatgctgccgcgggtcagggtgagagacatggaggagagcatg aggggctacgtccctctctcggatagccaggcctctgtggacggctccttcagctcgctg ttgtgtccggaggagcagctccggggcagctatggctgggactacctgctggactgggag ccgcgctaccacacactggcctcagtcttcaccgacatcagcctgctgcccgacgaggac ctccaggggggccacgagggcctggcgtccgaagcctgctgtctcatgcatccaccaccc ctcatcacgggcgtggcgcagccaggcctcagagccgtgcccccccggatgcccctgagc agcatgcacaccctgacccggaggccctcctaccccaagtacgcctacgcgcccctggcc aggaacacagggctcaccccatctgccatgacgcccagtttctctccctcgctgtctgtg ctcacgctgcggacccccaacgcctccccggtggtctcagagactgggctgggggtcttc aggctagacgctggcagcctcctggagggagaaatacaggtgtag

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