Oncorhynchus kisutch (coho salmon): 109900541
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Entry
109900541 CDS
T09179
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oki03009
]
109900541
Enzymes [BR:
oki01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
109900541
Ribosome biogenesis [BR:
oki03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
109900541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
109900541
NCBI-ProteinID:
XP_031641876
Ensembl:
ENSOKIG00005019143
UniProt:
A0A8C7MD06
LinkDB
All DBs
Position
LG2:6202332..6209266
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AA seq
743 aa
AA seq
DB search
MGRKLDPTTYVKKGPGRKSRKQKGAETELAKFLTDEDTAPKRLSSRSRKRAGKRAQVTKK
PKESIEKEEPKKGFTDENSEWLKPAKRKREVGQSDNEDDSDSQWEQEEDEGQEGGENNKG
GKILLEGDGDDDDLVDDYGALEDSSEGEGEVDGDGEELLPIERAARKQKKLQEAMGQESD
DDDKGKSGDEDMDEDDTVQANLDDMDKFILPGAEEIAKEGVLLVDLQTIHQRIKDNVDVL
SHFATKREEGKERTEYLSLLKKDLSTYYSYNNFLIDKLLDIFPVSELIDFLEANEIQRPV
TIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIFDSSVPIGATPEYLAGHYMLQG
ASSFLPVMALSPQEGETVLDMSSAPGGKTTYMAQLMRNTGVIVANDASADRLKSVVGNIH
RLGVTNSMICNYDGRQFPKVMGGFDRVLLDAPCSGTGVISKDPAVKTSKDESDIQRLAHL
QKELILAAIDSVNAESPSGGYLVYCTCSIMVEENEWVVDYALKKRNVKLVQTGLDFGKEG
FTRFKERRFHPSLKLSRRFYPHSHNMDGFFVAKLKKFSNTVPTTAVDKDGEEETEPSEAV
EVTADSSDEDGPSKAGSKNKSKKQKPVPGKPTVSQKATANGKPAKSIAKKTTNPSTLKKN
EKPTGPKKAKIAKMDGGTVKVDGELKSNTVKTEGETTKQSKEGSRFEKKGDKQRKSPMQS
KKRMGKNKFNKLKKLLKKEEVGQ
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaagttggatcccaccacttatgtgaagaaggggccggggcggaagtccagg
aagcagaaaggagcagagactgagctggccaagttcttaacggatgaggatactgcacca
aaacgactgtcaagcaggtccaggaaaagagctgggaagcgagctcaagtgaccaaaaag
cccaaggaaagcattgagaaggaggagccaaaaaaaggattcacagatgaaaacagtgaa
tggctgaagccagcaaagaggaagcgtgaggtcggccaatcagataacgaggacgacagt
gacagccaatgggagcaggaagaggacgagggacaagagggaggggagaacaataaaggg
ggaaaaattctacttgagggagatggtgatgatgatgacctggttgatgactacggtgca
ttggaggacagcagtgaaggagagggggaagtagatggtgatggagaggagctgctcccc
atcgagcgagctgcaaggaagcagaagaagctgcaggaagcaatgggccaggagagtgat
gatgatgataaggggaagagtggagatgaagacatggatgaagatgacacggtacaggct
aatttagatgatatggacaaattcatactacctggagcagaggagatagcaaaagagggt
gttttgcttgtagacctgcagaccatccaccagagaataaaggacaacgtggatgttctc
tctcactttgcaaccaagagagaggaggggaaagagagaacagagtacctctctctcctc
aaaaaggatctttccacttactacagctacaacaatttcctcatagacaaactgctggat
atcttcccagtgtcagagctgattgattttctggaggccaatgaaattcagcgacctgtc
accattcggaccaatacactgaagacaaggaggagggacttggctcaggccctgatcaac
agaggggtgaatctggatcctctggggaagtggtctaaagtgggcctggtcattttcgac
tcctcagtacccatcggtgcgaccccagagtacctagctggtcactacatgctgcaggga
gcctccagcttcctgcctgtcatggctctctctccccaggagggggagactgtgctcgac
atgagctcagctcccgggggaaagaccacctatatggcccagttgatgaggaacacaggt
gtgattgtggccaatgatgccagtgctgacagactgaagagtgtggtgggcaacatccac
cgtctgggagtcaccaactcaatgatctgtaactacgacgggaggcagttccctaaggta
atgggggggtttgacagagtgctgcttgatgctccctgctcaggcacaggagtaatctcc
aaagaccctgctgtgaagaccagtaaagacgagtctgacatccagcggttggcccacctg
cagaaggagctcatcctggcagccatcgactcggtcaacgctgagtctccctctggaggc
tatctggtgtactgcacatgctctataatggtggaggagaacgagtgggtagtggactac
gctctcaagaaaagaaacgtcaaacttgtccagactggactggactttggcaaagaaggt
ttcaccagattcaaagagagacgattccatccctctctgaaactctcacgccggttctat
cctcattcccacaacatggacggtttctttgtggccaagctgaaaaagttctccaacacg
gtcccaaccacagcagttgacaaagatggagaagaggaaaccgaaccatctgaggcagta
gaggttacagctgattcctctgatgaggacgggccatctaaagcagggtctaagaacaag
tccaagaagcagaagccagtccctggcaagccaactgtgtcacagaaggccacagccaac
gggaagccagccaaaagcatcgccaagaaaacaacaaacccaagcaccttgaaaaagaat
gagaaaccaactgggccgaaaaaggcaaagatcgctaagatggatggtgggactgtgaaa
gtggacggcgagctcaagtccaacacagtcaaaacagaaggggaaacgaccaaacagtca
aaggaagggagcaggtttgagaaaaagggcgataaacagaggaaatcccccatgcagagc
aagaagagaatggggaagaacaaattcaataagttgaagaagctgctgaaaaaagaagag
gttggacaatga
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