KEGG   Oncorhynchus kisutch (coho salmon): 109900569
Entry
109900569         CDS       T09179                                 
Name
(RefSeq) denticleless protein homolog
  KO
K11790  denticleless
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oki04121]
    109900569
Ubiquitin system [BR:oki04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     109900569
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st NBCH_WD40 TAF1C_beta-prop WDR54 MIOS_WD40 Beta-prop_WDR35_TULP_N Beta-prop_WDR11_1st DUF3152
Other DBs
NCBI-GeneID: 109900569
NCBI-ProteinID: XP_020351833
Ensembl: ENSOKIG00005013017
UniProt: A0A8C7FM85
LinkDB
Position
LG12:14720457..14729692
AA seq 642 aa
MLFRSIVDRGVRRRRCNDLNPKYNLSSLLDCYQCTRHDEHITYGNPGVAFATAPGLQGVL
AVASEEGVLRLYNTENRQSPLLKEWLAHDNAICDLAWVPGEASLVTASGDQMAKLWDVTS
GELLGSFKGHQCSLKSVAFTQQEKAVFCTGGRDGNIMVWDTRCSKKDGFYRQVKQISGAH
NKMDRNTPSKTKKKHPGTRGMDPSVDSQQSVTVVLFQDEHTLISSGAVDGIIKMWDLRKN
YTAYHHDPIPLQAYPYPGTSTRKLGYSGLVLDSTGSNLFSNCTDNNIYMFNVSGLKTTPV
AVFGGHLNSSFYVKSTVSPDNQFLASGSSDHHAYIWKISDTKHPPMMLQGHSQQVTSIAW
CPTDFTKIASCSDDNTIRIWRLDRGTDGAKSSVGEANLVGWACPKPATTMPSPMPLNQAE
CTPAKSPWPRHLGALASPQPAACAPRGADLPLASSTTAASPLQAQGSRATLIRQKTPFIS
NWFARTPGEQITPPLRKVLSPCPIPTLSSERTAKRRLENGDSGAAGGCEGSGECDGITGL
YPAAKRNRGLAGVCCPSQEPPHAATERSEAWGKADLQVEDQRPVPATQADKEKSSPKGAD
WLSAMSQKLRKGVGKPSSTPRSTSAPKRQDGRIPTSPVYTRS
NT seq 1929 nt   +upstreamnt  +downstreamnt
atgctttttcgctccattgtcgacagaggagtccgtagacggaggtgcaatgacctcaac
ccaaaatacaatttgtcctctctgctggactgctaccagtgtacccgtcatgatgaacac
atcacatacgggaatccgggggtcgccttcgctacagcccccgggctgcagggcgtcctt
gcagtggccagtgaggagggagtcctgaggctgtacaacacagagaaccgacagagtcca
ctgctgaaagaatggttggcacatgataatgctatctgtgaccttgcttgggtgccaggg
gaggctagcttggtgaccgcgtcaggtgatcagatggccaagctgtgggatgtgacatct
ggggagctccttggtagcttcaaggggcaccagtgcagcctcaagtctgttgcattcaca
cagcaggagaaagctgtgttctgtactgggggccgagatgggaatattatggtctgggac
acaaggtgcagcaaaaaagatggcttctacaggcaggtaaagcagatcagtggagctcac
aataagatggacagaaacacaccctctaaaacaaagaagaaacaccccggcacacgcggc
atggacccctctgtggactcccagcagagtgtcacggtggttctgttccaggatgaacac
acactcatctcctcaggtgctgttgatgggataatcaagatgtgggacctccggaaaaac
tacacagcgtaccaccatgaccccatcccactccaggcgtacccgtacccagggactagc
acacggaagctaggttactcagggctggtgttggactccactggctccaacctgttctcc
aactgcactgacaacaacatctacatgttcaatgtcagcgggctgaaaaccactccagtg
gcagtcttcggtggtcacctcaactcctcgttttacgtgaagtccactgttagccccgac
aaccagttcctggctagtggctcaagtgaccatcatgcgtacatctggaagatctccgac
acaaaacaccctcccatgatgcttcagggccacagccagcaagtgacctccatagcatgg
tgccccacagatttcacaaagattgcttcctgctctgatgacaacaccatacggatctgg
cgtctggaccgaggtacagatggagcaaagtcttctgtcggagaggccaatctggtgggc
tgggcatgtcctaaacctgccaccaccatgcccagtccaatgcctttgaaccaggcggag
tgcaccccagccaagagtccctggccaaggcatctgggggccctggcctccccccagcct
gctgcctgtgcccccagaggagcagacctgcctctcgcctcaagcaccaccgccgcctcc
ccccttcaggcccagggctccagggccaccctcatacgtcagaaaacgcccttcatcagc
aactggtttgcccggactcccggggaacagatcacccctcctctccgcaaggtgcttagc
ccctgtcccatccctaccctttcctcggagaggacggccaagcgccggctggagaatggt
gacagtggggcggcagggggctgtgaaggttcaggggagtgtgacggcatcacagggctc
taccccgcagccaagaggaaccggggactagcaggagtgtgctgccctagccaggagcca
cctcatgcggccacagagaggagcgaggcctggggaaaagcagacctccaggtggaagac
cagaggcctgtcccagccacacaggctgacaaggagaagagctctccaaaaggggcagac
tggttgtcagcaatgagccagaagctgaggaaaggtgtgggaaaacccagcagcactccc
agaagcaccagtgcccccaagaggcaagatggcaggataccgacctcaccagtatacaca
agatcctaa

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