Oncorhynchus kisutch (coho salmon): 109900569
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Entry
109900569 CDS
T09179
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109900569
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
109900569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
TAF1C_beta-prop
WDR54
MIOS_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
DUF3152
Motif
Other DBs
NCBI-GeneID:
109900569
NCBI-ProteinID:
XP_020351833
Ensembl:
ENSOKIG00005013017
UniProt:
A0A8C7FM85
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All DBs
Position
LG12:14720457..14729692
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AA seq
642 aa
AA seq
DB search
MLFRSIVDRGVRRRRCNDLNPKYNLSSLLDCYQCTRHDEHITYGNPGVAFATAPGLQGVL
AVASEEGVLRLYNTENRQSPLLKEWLAHDNAICDLAWVPGEASLVTASGDQMAKLWDVTS
GELLGSFKGHQCSLKSVAFTQQEKAVFCTGGRDGNIMVWDTRCSKKDGFYRQVKQISGAH
NKMDRNTPSKTKKKHPGTRGMDPSVDSQQSVTVVLFQDEHTLISSGAVDGIIKMWDLRKN
YTAYHHDPIPLQAYPYPGTSTRKLGYSGLVLDSTGSNLFSNCTDNNIYMFNVSGLKTTPV
AVFGGHLNSSFYVKSTVSPDNQFLASGSSDHHAYIWKISDTKHPPMMLQGHSQQVTSIAW
CPTDFTKIASCSDDNTIRIWRLDRGTDGAKSSVGEANLVGWACPKPATTMPSPMPLNQAE
CTPAKSPWPRHLGALASPQPAACAPRGADLPLASSTTAASPLQAQGSRATLIRQKTPFIS
NWFARTPGEQITPPLRKVLSPCPIPTLSSERTAKRRLENGDSGAAGGCEGSGECDGITGL
YPAAKRNRGLAGVCCPSQEPPHAATERSEAWGKADLQVEDQRPVPATQADKEKSSPKGAD
WLSAMSQKLRKGVGKPSSTPRSTSAPKRQDGRIPTSPVYTRS
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgctttttcgctccattgtcgacagaggagtccgtagacggaggtgcaatgacctcaac
ccaaaatacaatttgtcctctctgctggactgctaccagtgtacccgtcatgatgaacac
atcacatacgggaatccgggggtcgccttcgctacagcccccgggctgcagggcgtcctt
gcagtggccagtgaggagggagtcctgaggctgtacaacacagagaaccgacagagtcca
ctgctgaaagaatggttggcacatgataatgctatctgtgaccttgcttgggtgccaggg
gaggctagcttggtgaccgcgtcaggtgatcagatggccaagctgtgggatgtgacatct
ggggagctccttggtagcttcaaggggcaccagtgcagcctcaagtctgttgcattcaca
cagcaggagaaagctgtgttctgtactgggggccgagatgggaatattatggtctgggac
acaaggtgcagcaaaaaagatggcttctacaggcaggtaaagcagatcagtggagctcac
aataagatggacagaaacacaccctctaaaacaaagaagaaacaccccggcacacgcggc
atggacccctctgtggactcccagcagagtgtcacggtggttctgttccaggatgaacac
acactcatctcctcaggtgctgttgatgggataatcaagatgtgggacctccggaaaaac
tacacagcgtaccaccatgaccccatcccactccaggcgtacccgtacccagggactagc
acacggaagctaggttactcagggctggtgttggactccactggctccaacctgttctcc
aactgcactgacaacaacatctacatgttcaatgtcagcgggctgaaaaccactccagtg
gcagtcttcggtggtcacctcaactcctcgttttacgtgaagtccactgttagccccgac
aaccagttcctggctagtggctcaagtgaccatcatgcgtacatctggaagatctccgac
acaaaacaccctcccatgatgcttcagggccacagccagcaagtgacctccatagcatgg
tgccccacagatttcacaaagattgcttcctgctctgatgacaacaccatacggatctgg
cgtctggaccgaggtacagatggagcaaagtcttctgtcggagaggccaatctggtgggc
tgggcatgtcctaaacctgccaccaccatgcccagtccaatgcctttgaaccaggcggag
tgcaccccagccaagagtccctggccaaggcatctgggggccctggcctccccccagcct
gctgcctgtgcccccagaggagcagacctgcctctcgcctcaagcaccaccgccgcctcc
ccccttcaggcccagggctccagggccaccctcatacgtcagaaaacgcccttcatcagc
aactggtttgcccggactcccggggaacagatcacccctcctctccgcaaggtgcttagc
ccctgtcccatccctaccctttcctcggagaggacggccaagcgccggctggagaatggt
gacagtggggcggcagggggctgtgaaggttcaggggagtgtgacggcatcacagggctc
taccccgcagccaagaggaaccggggactagcaggagtgtgctgccctagccaggagcca
cctcatgcggccacagagaggagcgaggcctggggaaaagcagacctccaggtggaagac
cagaggcctgtcccagccacacaggctgacaaggagaagagctctccaaaaggggcagac
tggttgtcagcaatgagccagaagctgaggaaaggtgtgggaaaacccagcagcactccc
agaagcaccagtgcccccaagaggcaagatggcaggataccgacctcaccagtatacaca
agatcctaa
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