Oncorhynchus kisutch (coho salmon): 109900594
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Entry
109900594 CDS
T09179
Name
(RefSeq) transcription factor SOX-11-like
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109900594
Transcription factors [BR:
oki03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109900594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109900594
NCBI-ProteinID:
XP_020351880
Ensembl:
ENSOKIG00005017067
UniProt:
A0A8C7GA82
LinkDB
All DBs
Position
LG12:15904386..15906746
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AA seq
371 aa
AA seq
DB search
MVQQTEHSETESSMSREATDTEESEMMACSLVPLKPVKADWCKTATGHIKRPMNAFMVWS
KVERRKIMEQSPDMHNAEISKRLGKRWKLLKDSEKIPFIREAERLRLQHMADYPDYKYRP
KKKPKLDSFTKPAVHQSPEKASLKHVKAPSKKFTKLKTTKVVKTRPSHDPRYDYVFTSFK
TTSKSVKREYTDDEDDEEDYEEELSSRIKVEEDEEPIPYNIAKVPASPTLSSTAETEGAS
MYDESRNPNTASNRLFYNFKNITKQSTTCPASLSPASSFRSVSSSSSSSEDADDLLVDFS
LNLASCAHRAELGNSNSGNLSLSFVDKDLDSFSEGSLSSHFEFPDYCTPELSEMIAGDWL
EANFSDLVFTY
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcaaacagaacacagcgagacggagagtagcatgtccagggaagctacagac
acggaggaaagcgaaatgatggcgtgcagcctggtaccactgaaacccgtgaaagccgac
tggtgcaagacagcaaccggtcacatcaaacgacccatgaatgcatttatggtgtggtcg
aaagtcgagaggagaaagatcatggagcagtctccggacatgcacaacgcggaaatctcc
aaacgacttggaaagcggtggaaattgctgaaggacagtgaaaagatcccgtttatcagg
gaagccgagaggctccggctacaacacatggctgattaccccgactacaagtaccgaccc
aagaaaaaaccaaagctcgacagtttcactaaaccagcggtgcaccagtcaccggagaag
gccagcctcaaacatgtaaaagctcccagtaagaaattcactaaattgaaaactactaag
gtggtgaaaacgagaccatctcacgaccctcgctacgactatgttttcaccagctttaaa
actactagcaagtccgtaaaaagggaatatactgacgatgaggatgacgaagaggactac
gaggaggagctgtcctctcggattaaagtggaggaggacgaggaaccgataccgtacaac
atcgccaaagtgcccgcgagccccactttgagctccactgccgagacagagggcgcgagc
atgtacgatgagtctcggaatccgaacacagcttccaacagactgttctacaatttcaag
aacattaccaagcagagcacaacttgtcctgcttcactctcaccagcatcttcattcagg
tccgtgtccagctcgtccagctccagtgaagacgcggatgatttactggttgacttcagt
ttaaatttagcatcctgtgctcacagagcggagctggggaactcgaattcagggaatctc
tctctttcctttgtggataaggacttggactctttcagtgagggcagcctcagctctcac
tttgaattcccagactattgcacccccgagctgagcgaaatgatcgcaggggattggctt
gaggctaacttttcagatttggtatttacctactag
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