Oncorhynchus kisutch (coho salmon): 109900895
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Entry
109900895 CDS
T09179
Symbol
zfp36l1
Name
(RefSeq) mRNA decay activator protein ZFP36L1
KO
K18753
butyrate response factor
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
109900895 (zfp36l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109900895 (zfp36l1)
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109900895 (zfp36l1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tis11B_N
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_UNK
zf-CCCH_4
zf-CCCH_2
zf-CCCH_9
Zn_finger_prot
zf-CCCH_UNK-like_4th
zf-CCCH_11
zf-CCCH_PAN3
Motif
Other DBs
NCBI-GeneID:
109900895
NCBI-ProteinID:
XP_020352373
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All DBs
Position
LG12:complement(33233088..33238390)
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AA seq
369 aa
AA seq
DB search
MTASIASPFFDYNEMNKNNKMFNYNNNTFGGPHSTSVPVCTGANNPPSCPPTGSLLDRKV
VGAPSAGGSGLFQRRHSVTLPNTKFNQNQFINSLKADPSSLLIGGGSNNKENRFRDRSFS
ETGDRLKQGSQLQCLGGGQGQQQQQVNSSRYKTELCRPFEENGTCKYGDKCQFAHGMHEL
RSLSRHPKYKTELCRTFHTIGFCPYGPRCHFIHNAEERRGPPPPFSTFNKMERPRLQHSF
SFAGFPSQGGLQNSPTSVTPPPIFSTEDLGEWPSNPFTYSSQELVNLFGPSLVGGPPVLE
PNLLAPAQHSPTTPCFFRPMSECPPSPPDSLSDQEGYQSSLGSQSGSESPSLDASRRLPI
FSRLSISDD
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaagtatcgcttctcctttcttcgactacaacgaaatgaacaagaacaataag
atgtttaactacaacaacaatactttcggtgggccccactccacatctgtcccagtctgc
actggtgccaacaaccctccctcttgcccccccactggttccctgctggacaggaaggta
gtgggggccccctctgcagggggcagtgggctgttccagcgccgccactcggtcaccctc
cccaacaccaaattcaaccagaatcagttcatcaacagtctcaaggctgacccctcctcg
ctcctgattggcggtggcagtaacaacaaggagaaccgcttccgggaccgctccttctcc
gagaccggggatcgcctcaagcagggcagccagctccagtgccttggcggcgggcagggc
cagcagcagcagcaggtcaactccagccgctacaagacggagctgtgccggcccttcgag
gagaacggcacttgcaagtacggcgacaagtgccagtttgcccacggcatgcacgagctg
cgtagcctgagccgccacccaaagtacaagactgagctgtgccgcaccttccacaccatc
ggcttctgcccctatggcccgcgctgccacttcatccacaacgcagaggagcgccgcggc
ccgccgccaccgttctccactttcaacaagatggagcgcccccgcctccagcacagcttt
agcttcgccggcttccccagccagggcggtctacagaacagccccacctcggtcaccccg
ccgcccattttctccacagaggacctgggcgagtggcccagcaaccccttcacctactcc
agccaggagttggtcaatctgtttggcccgagcctagtaggggggccccctgtcttggag
cccaacctgctggccccagcgcagcactcccccactaccccctgcttcttccggcccatg
tcggagtgtccccccagccccccggactctctctccgaccaggagggctaccagagcagc
ctgggcagtcagagcggttccgaatcccccagcctggatgcctcgcgccgcctgcccatc
ttcagcaggctctccatctctgatgattag
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