Oncorhynchus kisutch (coho salmon): 109901015
Help
Entry
109901015 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109901015
04121 Ubiquitin system [BR:
oki04121
]
109901015
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109901015
Membrane trafficking [BR:
oki04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
109901015
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109901015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
Zn_ribbon_19
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-Nse
zf-RING_16
HypA
Ig_TgrO1
Zn_ribbon_6
DZR
Motif
Other DBs
NCBI-GeneID:
109901015
NCBI-ProteinID:
XP_020352573
Ensembl:
ENSOKIG00005037713
LinkDB
All DBs
Position
LG27:7911994..7916511
Genome browser
AA seq
312 aa
AA seq
DB search
MAEAPLGPCRFFCHQCSAEINPRLPDYTCPQCESGFIEELSEERSTENESTSIASTSDQN
RPTFEIMDHQHMFTFPPGYGQFSLGIFDENFDLRAGMPTEDNRETENRREREMASRQRYS
ARQPRGRHIPRRQGQRHEGVPTLEGIIQQLVNGIIAPTAMAPNIGMGPWGMLHSNPMDYA
WGANGLDAIITQLLNQFENTGPPPADRERIKTLPTIQITEEHVGSSLECPVCKEDYSVGE
TVRQLPCNHLFHNDCIVPWLEQHDTCPVCRKSLSGQNTATDPPGLSGMNFSPSSSSSSSS
NSPSNENAANNS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagctcccctagggccctgtcgttttttttgtcaccaatgttcagcagagatc
aaccctcgtctcccggactacacctgtccacagtgtgaatctggcttcattgaagagcta
tcagaggaaagaagcactgaaaatgagtccacatccattgcctccaccagcgatcagaac
cgtccgactttcgagattatggaccaccagcacatgtttacatttccgcccggatacgga
cagttttctctggggatctttgatgagaattttgacctccgagcggggatgccgacggaa
gacaaccgcgagacggagaaccggcgggaacgggagatggcatcacggcaacggtacagt
gcccggcaaccacggggacgacacatcccacggcgacagggacagagacacgagggagta
cccactttagagggaatcatccagcagctagtaaatggaatcatagcacccacagccatg
gctccaaacattgggatgggaccatggggcatgctacactcaaatccaatggactatgct
tggggtgccaatggactcgatgctatcattacccagttattgaatcagtttgagaacaca
ggtcctcctcctgctgacagagagaggataaagaccctgcccaccatccagatcacagag
gaacatgtgggttccagtttagaatgtcctgtgtgcaaagaagactacagtgtcggggag
actgtcaggcaacttccgtgcaatcacctgtttcacaatgactgtatagtaccatggctg
gaacaacacgacacatgtccagtgtgcagaaagagtctcagtggacagaacacagctaca
gaccccccgggactatcaggaatgaacttctccccttcctcctcctcttcatcctcctcc
aactcccccagtaacgagaacgctgccaacaactcctag
DBGET
integrated database retrieval system
