Oncorhynchus kisutch (coho salmon): 109901032
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Entry
109901032 CDS
T09179
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109901032 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109901032 (dhx15)
03009 Ribosome biogenesis [BR:
oki03009
]
109901032 (dhx15)
Enzymes [BR:
oki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109901032 (dhx15)
Spliceosome [BR:
oki03041
]
Complex A
U2 snRNP components
U2 related factors
109901032 (dhx15)
Complex B
109901032 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
109901032 (dhx15)
Ribosome biogenesis [BR:
oki03009
]
Eukaryotic type
90S particles
Helicases
109901032 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
AAA_25
nSTAND3
SRP54
Flavi_DEAD
Atrophin-1
AAA_29
Motif
Other DBs
NCBI-GeneID:
109901032
NCBI-ProteinID:
XP_020352604
Ensembl:
ENSOKIG00005026440
LinkDB
All DBs
Position
LG12:43614003..43627758
Genome browser
AA seq
765 aa
AA seq
DB search
MSKRHRLDLGDDYSNKKRSDGKDRDRDRDRDERSKDRDRERDRDRDRDRDRDRDRDVKPS
VVPPNTMMAVGGMLPLKQTAMQQQINPFTNLPHTPRYYEILKKRLQLPVWEYKERFNDIL
ARHQSFVLVGETGSGKTTQIPQWCVDMVKGLGGPKKAVACTQPRRVAAMSVAQRVADEMD
VMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD
ILMGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEPERD
YLEAAIRTVVQIHMCEEEEGDCLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKVIPLYS
TLPPQQQQRIFEAAPPRKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPR
IRVESLLVTAISKASAQQRAGRAGRTRPGKTFRLYTEKAYKTEMQDNTYPEILRSNLGSV
VLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQ
LAKMVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNV
YHAFKQNHESTQWCYDNFVNYRSLMSADNVRSQLSRIMDRFNLPRRSTEFTSRDYYINIR
RALVTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTC
SDIKPEWLVKVAPQYYEMGNFPQCEAKRQLERIVAKLQTKEYSQY
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaagacaccgtttagatttaggcgacgactactccaataaaaagagatctgat
gggaaagaccgagatcgtgacagggaccgtgacgagcgctctaaagacagggacagggag
agggacagggaccgcgacagagatcgggacagggaccgagatagggacgtgaagccctct
gtcgtgccccccaacaccatgatggccgttggaggcatgcttcctctcaagcagacagcc
atgcagcagcagatcaacccgttcacaaacctgccccacacaccacgctactatgagatc
ttgaagaagaggctgcagctgcctgtgtgggagtacaaggagcgcttcaacgacatcctg
gcacgccaccagagctttgtgcttgtcggagagacgggctccgggaaaaccacacagatc
ccccaatggtgtgtggacatggtgaagggcttgggtggccccaagaaggcggtggcctgt
acccaacccagaagggtggcagccatgagcgtggcccaaagggtggccgacgagatggat
gtcatgctgggccaggaggtgggctactctatacgatttgaggactgcagctccgccaag
accatactgaagtatatgacagacggtatgttgcttcgggaagccatgaacgaccccttg
ctggagcggtatggcgtgatcatcctggatgaggcccacgagagaacgctggccacggac
atcctaatgggagtattgaaggaggtggtccgacagaggtcagacctcaaggtgattgtg
atgagtgccacattagacgccgggaagttccaagtgtactttgacagctgtccgctgctg
accattcccggacgcacacaccccgtggagatcttctacacccctgagccggagcgggac
tacctggaagccgccatccgcacggtcgttcagatccacatgtgtgaggaagaggagggg
gactgtctgctgttcctcaccggacaagaggaaattgacgaggcctgtaaacggatcaaa
cgggagatcgacgacttgggacctgaagtcggggacatcaaagtcattccactatattcc
acactgcctccccagcagcaacaaagaatctttgaggccgcaccccccaggaagcccagc
ggtgcgataggaagaaaggttgtggtttcgacaaacattgctgagacatcccttaccatc
gacggagtggtgtttgtgatcgatcccggttttgccaagcaaaaggtgtacaatcctcgt
atcagggtggagtctctcctggtaacggcgatcagcaaagcctcggcgcagcagagggcg
ggccgtgccggcaggacacggccagggaagactttccgcctctacactgagaaagcctac
aagacagagatgcaggacaacacgtatcctgagattctccggtccaacttgggttctgtc
gtgttgcagttgaagaagctgggtatcgatgacctggtgcactttgacttcatggaccca
ccagccccggagaccctgatgcgggcgctggagctgctcaactacctggcggcactcaac
gacgacggcgacctgacagagctgggctccatgatggcagagttcccgttggacccacag
ctggccaagatggtgatcgccagctgcgagttcaactgctccaacgagatcctctccatc
accgccatgctgtcagtcccgcagtgtttcgtccgccccaccgaggctaagaaggcggcg
gacgagtccaagatgcggttcgcccacatcgatggagaccacctgacactcctcaacgtc
taccacgccttcaaacaaaaccacgagtctacacagtggtgctacgacaactttgtgaac
taccgttcgctgatgtcggcggacaacgtgcgctcgcagctgtcccggatcatggaccgc
ttcaacctgccccggcgcagcaccgaattcaccagcagagactactacatcaacatccgc
cgagcgctagtcacaggctttttcatgcaggtggctcatttggagcgcactggccattat
ctcacagtcaaggacaaccaggtggtccagctacacccctctaccgtcctggaccacaag
ccagagtgggtgctctacaatgagtttgtcctcacaaccaagaactacattcgcacctgc
tcggatatcaaaccggaatggctggtgaaggttgctcctcagtactacgaaatgggcaac
ttcccacagtgtgaagccaagaggcagttggagcgaatcgttgccaaactccagaccaag
gagtattcccagtactga
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