Oncorhynchus kisutch (coho salmon): 109901075 Help Entry 109901075         CDS       T09179                                  Name (RefSeq) protein PAT1 homolog 1   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism oki  Oncorhynchus kisutch (coho salmon) Pathway oki03018   RNA degradation Brite KEGG Orthology (KO) [BR:oki00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     109901075  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:oki03019]     109901075 Messenger RNA biogenesis [BR:oki03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      109901075   mRNA degradation factors    5'-3' decay     Decapping complex      109901075 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PAT1 LRR_RI_capping Motif Other DBs NCBI-GeneID:  109901075 NCBI-ProteinID:  XP_020352683 Ensembl:  ENSOKIG00005022479 LinkDB All DBs Position LG12:complement(47274411..47294730) Genome browser AA seq 806 aa AA seqDB search MFRFQSLDEDCTLEKEEGLVEEEDEIDQFNDDTFGDGAIDDDWQEEHKRLAELEERKNDG LGGLGLGGLGMGGMGGGDSSTVQLPPPASRVPHPSSLPPPHHSLSSMPPPGLEEGGGGDL AESLAMLILGADPAIASVGGPAGSGDRSTGLPPPPSMPQQHHHPSQLPSHHQLTPSGLPP GPLHPSLLSYQQHQHLLRRGGAPMQQMNSHNIWENNMGFGPVSVTPGLITQMEDSPLMSI IKEVGLPNRPPPVMSEDGRDFSERAPPPRSSSPVIGSPPVRAVPIGTPPKQPMSHAMNHQ QQIHHPTTVHVRAPVHHQHRYPPSFPERISPNTLLNMANSPLCRPPFPAGVGPVLSQIQR AQMLNSQVAGFPRGCQGPPLLPGGGGFRPFFGQPPPHRMGPHHNHVPCPIIRHNTTHLHP QHRRMLTQRMQSRGGERGGRVGDWRSRDPYSNLMTQREKEWVAKIQMMQLQSTDPYLDDY YYQNYFEKMEKRQERDRDGVRKEHTTKLITPQVAKLEHTYRPVQFAGSLGKLTVSSVNNP RKMIDTVVTSRTDDEEKREKQVWNKRRQILYTVEKMYSLLLEVQDFEKRFMQTPEEQRET LLEQHKTHTLQLYASLKEKEWDDRVSDEQCLLIMSVRKGKRLISRLIPFLPPLQAATVVM GIARNLHALAKKDKQDQALCWLVEPVAVVISSLSSAALTDLLQELQGSEGQLSKVLQNKF GVTLLYLILSEGERMQSSDLNCQLMDDNRWTELVFSVTRELLNVPPSSLSPPLFTPPNLL SLFSRYVDRQRLELLQEKLQISALSR NT seq 2421 nt NT seq  +upstreamnt  +downstreamnt atgttccgttttcagtcccttgatgaagattgtaccctggagaaggaggaggggctggta gaagaagaagatgagattgaccagtttaacgacgacaccttcggagatggagccatcgat gatgactggcaggaggagcacaagcggctcgcagagctcgaagaacgaaagaacgacgga ctcggaggtttaggtctagggggactagggatggggggaatgggaggtggagactcctcc accgttcaactccctcctcctgccagtcgcgtcccccacccgtcatccctccccccacca catcactccctctcttcgatgccccctccgggcctggaggagggggggggaggcgaccta gccgagtccctagccatgttgattctcggggcggacccggccatcgccagcgtgggtggt ccagccgggtctggtgacaggtccactggtctccctcctcccccttccatgccccagcag caccaccacccctcccagctcccttcccaccaccagctgaccccgtcggggctgcccccg ggcccactgcatccttccctgctgagctaccagcagcatcagcacctcctacgccgaggg ggtgcccccatgcaacagatgaactcacacaatatctgggagaacaacatgggatttggg cctgttagcgtcacccctggactaatcactcaaatggaggacagtccacttatgtccatt atcaaagaggtggggctgcccaatcggcctccgccagttatgagcgaggatgggcgggac ttttcggaaagggcccccccgcctcgctcgtcctctcccgtgattggaagcccaccagtg agggctgtgcctatcgggactccgcccaagcagccgatgagtcatgctatgaatcatcag cagcagatccaccaccccaccaccgttcatgtgcgagccccggtccaccaccaacaccgc taccccccttccttccctgagcgcatctcccccaataccctcttaaacatggctaactct cctctttgtcgtcctccattcccggccggcgtgggtcccgttctgtcccagatccaacgt gcccagatgctcaactctcaggttgctggcttccccaggggctgtcagggtcccccgttg ctgcctggcggcggaggcttcaggcccttcttcggccagccccctccccacaggatgggt ccccaccacaaccacgtaccctgtcccatcatccggcacaacaccacgcacctgcacccc cagcaccgccgcatgctcacccagaggatgcagagtagaggaggtgagcgtggcgggcgt gtgggggactggcggagcagagacccctacagtaacttgatgacccagagggagaaggag tgggtggccaagatccagatgatgcagctgcagagcactgatccctacctggatgactac tactaccagaattactttgagaagatggagaagaggcaggagagagaccgagacggcgtg aggaaggagcacaccaccaaactcatcaccccccaggtggccaagctggaacacacctac agaccagtgcagtttgcaggctcactgggtaagctgactgtgtccagcgtcaacaacccc aggaagatgatcgacacagtggtgaccagtcgcactgatgacgaggagaagagagagaaa caggtgtggaataagaggcggcagatcctctacactgtggagaagatgtacagtctgctg ctggaggtgcaggactttgagaagcgcttcatgcagacgccagaggagcagagagagacc ctgctggagcagcacaaaacccacacgctgcagctctacgcctccctcaaggagaaggag tgggacgacagagtgagtgacgagcagtgtctgttgatcatgtcggtgcgtaaaggaaag cgcctcatctccaggctcatcccattcctgcctccgctgcaggctgccaccgttgtcatg gggattgcccggaacctgcacgccctggccaagaaagacaaacaggaccaggcgctgtgc tggttggtggagcccgttgctgtggtgatctcttccctatctagcgctgccctcacagac ttgctgcaggagctgcaaggcagcgagggtcaactgtccaaagtgttgcaaaataagttt ggtgtgacgctgctttacctgatcctgagtgaaggagagcgaatgcaaagctccgacctt aactgtcaactcatggatgacaatcgatggacggagttggtgttctctgtgaccagggag ctgctcaatgtgcccccctcgtccctgtcccctcctctcttcacccctcccaacctgctc tctctcttctctcgctacgtagaccgacagaggctggagctgctgcaggagaagttacag atctccgcattgtccaggtag

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