Oncorhynchus kisutch (coho salmon): 109901113
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Entry
109901113 CDS
T09179
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109901113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109901113
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
109901113
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
HECT type E3
109901113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
109901113
NCBI-ProteinID:
XP_031693593
Ensembl:
ENSOKIG00005024136
LinkDB
All DBs
Position
LG12:49281575..49294263
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AA seq
1015 aa
AA seq
DB search
MISWGEDCRNGFGLVKPGGLDTTKTDISCVNLIHLKSKIQALSAGNSVVAFIRNNGRLVS
VARIQEDLDGRRFTGKLKSVTCKERIRALSCGDSHAVLLSEEGRVLCLDKANILSPLGNL
CNRQVTQVACGDQHSILLTQDGQVFTWGQNTSGQLGLGWGEPRDMSMSPKPLKSLSGIPL
VQITAGGDHSFALSLSGAVFGWGKNTAGQLGLGDTTNRCAPAPVVCLNLKKTVLISCGGE
HTAVLTKGGVVFTFGSGHYGQLGHNSLRDELRPRVVGQLCGSKVTQIACGRHHTLAFVGP
SNKMYSFGRGEQGQLGNGVKIDQSVPLPVQLPDQIDDQKIEHIFAGGNHSFALCSLGQES
EERPNNLRSSVGKVTQQAIDEEIIDKWISECDSKSWKKGQKEITKMFSSASCLNGSFLDK
SCDKHYQTSPKQSGLDYSLVQGAFRKLAKKGKVLTEVEAVVQHTLLRSLYEEPIGVEGLR
VYLVLPELLRVLHKQHRRTDLTEAVAAAILRLHPDKLQVLGDCWSSLKPSVMTKHIGVWK
KALSGILRNEHILRTRDTGIKHLLQVLGHLHRANQKSVETQTVPDSTFCMEEVHFNPIFL
EEDVKLWRLWSKQDVDQTPAIFCRYPFLMNLQSKINVFNINAALTKNPPNNRQRTGMWPF
DMFLVAAPAPFFELRLNRASLIEDTFHQLSVAYHSTFKRSLVVYFDEDVKLTDVYKRDFF
LHLFDKLLVPESGMFMYNDTNTLAWFPAMPRVEEKHYFLFGVLCGMALYNNNMVHLPFPM
AFFKKLVNINPSLEDLREFSPIEAGSLQYILDYPDDDVENMDMTFSVMWGDVAVELDPKE
TGKLVTSANKKEFVDTYVNYIFNQSVEVVFEEFRKGFFKVCDKDVVEFFQPEELRGVMVG
KENFDWEMLKQNTVYEGEYHAGHPNIVTFWEVFEELTEDQKKAFLLFLTGCDRVPILGMN
QIRMTVQTLLNSSQLHFPEALTCHSLLQLPIYPSKETLQSRLIEAVGHNRGFKNE
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgatttcatggggagaggattgtcgtaatggctttggtttagtaaagccgggtggttta
gatacgaccaaaacggatattagttgcgttaatttgatacaccttaaatctaaaattcag
gctctgtccgcaggtaacagtgtggtcgcgtttatcagaaataatgggagactagtatct
gtcgcacggattcaagaggacctagatgggagaagattcacagggaaactgaagagtgtg
acatgtaaggagaggattcgggctctgagttgtggagattctcatgctgttttactgtct
gaagagggtcgggttctctgcttggacaaagccaacattctcagcccattgggtaaccta
tgtaaccgacaggtaactcaggttgcatgtggagaccagcattcaattttactaactcag
gatggtcaggttttcacatggggtcagaacaccagcggtcagctgggtttggggtggggc
gagccacgcgacatgtccatgtcccccaagcccctgaagtctctatcagggatccccctg
gttcagatcactgcagggggagaccacagcttcgctctgtccctttctggagctgtgttc
ggctggggcaagaacaccgccgggcaactgggactaggggacacaacaaacagatgtgct
ccagctcctgttgtttgcctgaatctgaagaagactgttttgatttcatgtggaggagaa
catactgccgttctgacaaagggaggtgtggtgttcacatttggttcaggccactatgga
cagcttggacacaactctctccgagatgaactacgacctcgagtggtggggcaactttgt
ggatcaaaggtgacccagatagcctgtggaagacaccacacattagcatttgtggggccc
tccaataagatgtactcatttgggcgcggagagcaaggacagctgggaaatggagtaaag
attgatcagtctgtgccccttccagtacaactgccagaccagattgatgaccagaaaatt
gaacacatttttgctggaggaaaccattcctttgcattgtgctctcttggtcaggagtct
gaagaaaggcctaacaatctcaggtcaagtgtgggcaaagtgacacaacaagctatagat
gaagaaatcattgacaaatggatctcggaatgtgattcaaagtcttggaaaaaaggacag
aaggaaatcacaaaaatgttttcttctgcatcgtgtttaaatgggagctttcttgataaa
agttgtgacaaacattaccaaacctcaccaaaacagtctggcctggattattcactcgtc
caaggcgcattccggaagctggcgaaaaagggcaaagttttgactgaggttgaagctgtt
gtccagcacacactacttcgctccctgtatgaggagcccattggagtggagggcttgagg
gtctacctggttctccctgagctcctgagggtccttcacaaacagcacagaaggacagat
ctcaccgaagccgttgctgctgctatcctcagactgcaccccgacaagctgcaggtcctc
ggtgactgctggtcctcattgaagccgtctgtcatgaccaagcacattggggtgtggaag
aaggccctgtcggggattctgaggaatgaacatattctacgcactcgtgatactgggatc
aagcacctgctccaggtcctcggccatctccacagagcaaaccagaaatccgtagagacc
cagactgttccagacagtaccttttgtatggaggaggttcacttcaatcccatatttcta
gaggaggatgtaaagctttggcgtttatggtcaaagcaggatgtggatcagacacctgcc
atcttttgtcgttacccattcttgatgaatctgcagagcaagataaacgtttttaacatc
aacgccgcactcacaaagaatccccctaacaatcgccaaaggactggcatgtggcctttt
gacatgttcctcgtggcggcgcctgctccgttctttgagctgaggctgaatagagcatca
ctcatcgaagacactttccatcaactgagtgtagcgtatcacagtaccttcaagaggtcc
cttgtggtctatttcgacgaggatgtgaagctgacagatgtctacaaaagggacttcttt
ctccatttgtttgataagctgttggtacccgagtctgggatgttcatgtacaacgacacc
aatacgctggcctggttccctgcaatgcctagagtggaggagaagcattatttcctgttt
ggggttctgtgtgggatggccctgtacaacaacaacatggtgcacctccccttccccatg
gccttcttcaagaagctggtgaacatcaatccctctttagaggacctgagagagtttagc
cccattgaagcagggagtttgcagtacatcttggattaccctgatgatgatgttgaaaac
atggacatgactttctcagtgatgtggggtgatgtagcggtggaacttgatcccaaagaa
actggaaaactcgtcacaagtgccaacaagaaggagtttgttgacacctatgtgaactac
atcttcaaccagtcagtagaggtggtgtttgaagagttcaggaaaggcttcttcaaggtg
tgtgacaaggacgtggtggagttcttccagccagaggaactgaggggagtgatggtgggg
aaggagaatttcgactgggaaatgctgaaacagaacactgtgtatgaaggagagtaccat
gctgggcatcccaacatcgtcacattctgggaggtgtttgaggaactgacagaggatcaa
aagaaagcgttcctgttgttcctgactggctgtgatcgtgtgcccatcctgggtatgaac
cagatcaggatgacggtccaaacccttctcaactcctcccaactgcatttcccagaggcg
ctgacctgtcactctctgttgcagctgcccatctacccctccaaagagacactacagagc
agacttatagaagctgttggccacaacagaggtttcaagaatgaataa
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