Oncorhynchus kisutch (coho salmon): 109901115
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Entry
109901115 CDS
T09179
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109901115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109901115
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
109901115
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
HECT type E3
109901115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
109901115
NCBI-ProteinID:
XP_031693585
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All DBs
Position
LG12:49311530..49335960
Genome browser
AA seq
1015 aa
AA seq
DB search
MISWGEDCRNGFGLVKPDGLDTTKTDISCVNLIHLKSKIQALSAGNSVVAFIRNNGRLVS
VARIQEDLDGRRFTGKLKSVTCKERIRALSCGDSHAVLLSEEGRVLCLDKANILSPLGNL
CNRQVTQVACGDQHSILLTQDGQVFTWGQNTSGQLGLGWGEPRDMSMSRKPLKSLSGIPL
VQITAGGDHSFALSLSGAVFGWGKNTAGQLGLGDTTNRCAPAPVVCLNLKKTVLISCGGE
HTAVLTKGGVVFTFGSGHYGQLGHNSLRDELRPRVVGQLCGSKVTQIACGRHHTLAFVGP
SNKMYSFGRGEQGQLGNGVKIDQSVPLPVQLPDQIDDQKIEHIFAGGNHSFALCSLGQES
EERPNNLRSSVGKVTQQAIDEEIIDKWISECDSKSWKKGQKEITKMFSSASCLNGSFLDK
SCDKHYQTSPKQSGLDYSLVQGAFRKLAKKGKVLTEVEAVVQHTLLRSLYEEPIGVEGLR
VYLVLPELLRVLHKQHRRTDLTEAVAAAILRLHPDKLQVLGDCWSSLKPSVMTKHIGVWK
KALSGILRNEHILRTRDTGIKHLLQVLGHLHRANQKSVETQTVPDSTFCMEEVHFNPIFL
EEDVKLWRLWSKQDVDQTPAIFCRYPFLMNLQSKINVFNINAALTKNPPNNRQRTGMWPF
DMFLVAAPAPFFELRLNRASLIEDTFHQLSVAYHSTFKRSLVVYFNEDVKLTDVYKRDFF
LHLFDKLLVPESGMFMYNDTNTLAWFPAMPRVEEKHYFLFGVLCGMALYNNNMVHLPFPM
AFFKKLVNINPSLEDLREFSPIEAGSLQYILDYPDDDVENMDMTFSVMWGDVAVELDPKE
TGKLVTSANKKEFVDTYVNYIFNQSVEVVFEEFRKGFFKVCDKDVVEFFQPEELRGVMVG
KENFDWETLKQNTVYEGEYHAGHPNIVTFWEVFEELTEDQKKAFLLFLTGCDRVPILGMN
QIMMRVQTLLNSSQQHFPEALTCHSLLQLPIYPSKETLQSRLIEAVGHNRGFKNE
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgatttcatggggagaggattgtcgtaatggctttggtttagtgaagccggatggttta
gatacgaccaaaacggatattagttgcgttaatttgatacaccttaaatctaaaattcag
gctctgtccgcaggtaacagtgtggttgcgtttatcagaaataatgggagactagtgtct
gtcgcacggattcaagaggacctagatgggagaagattcacagggaaactgaagagtgtg
acatgtaaggagaggattcgggctctgagttgtggagattctcatgctgttttactgtct
gaagagggtcgggttctctgcttggacaaagccaacattctcagcccattgggtaaccta
tgtaaccgacaggtaactcaggttgcatgtggagaccagcattcaattttactaactcag
gatggtcaggttttcacatggggtcagaacaccagcggtcagctgggtttggggtggggc
gagccacgcgacatgtccatgtcccgcaagcccctgaagtctctatcagggatccccctg
gttcagatcactgcagggggagaccacagcttcgctctgtccctttctggagctgtgttc
ggctggggcaagaacaccgccgggcaactgggactaggggacacaacaaacagatgtgct
ccagctcctgttgtttgcctgaatctgaagaagactgttttgatttcatgtggaggagaa
catactgccgttctgacaaagggaggtgtggtgttcacatttggttcaggccactatgga
cagcttggacacaactctctccgagatgaactacgacctcgagtggtggggcaactttgt
ggatcaaaggtgacccagatagcctgtggaagacaccacacattagcatttgtggggccc
tccaataagatgtactcatttgggcgcggagagcaaggacagctgggaaatggagtaaag
attgatcagtctgtgccccttccagtacaactgccagaccagattgatgaccagaaaatt
gaacacatttttgctggaggaaaccattcctttgcattgtgctctcttggtcaggagtct
gaagaaaggcctaacaatctcaggtcaagtgtgggcaaagtgacacaacaagctatagat
gaagaaatcattgacaaatggatctcggaatgtgattcaaagtcttggaaaaaaggacag
aaggaaatcacaaaaatgttttcttctgcatcgtgtttaaatgggagctttcttgataaa
agttgtgacaaacattaccaaacctcaccaaaacagtctggcctggattattcactcgtc
caaggcgcattccggaagctggcgaaaaagggcaaagttttgactgaggttgaagctgtt
gtccagcacacactacttcgctccctgtatgaggagcccattggagtggagggcttgagg
gtctacctggttctccctgagctcctgagggtccttcacaaacagcacagaaggacagat
ctcaccgaagccgttgctgctgctatcctcagactgcaccccgacaagctgcaggtcctc
ggtgactgctggtcctcattgaagccgtctgtcatgaccaagcacattggggtgtggaag
aaggccctgtcggggattctgaggaatgaacatattctacgcactcgtgatactgggatc
aagcacctgctccaggtcctcggccatctccacagagcaaaccagaaatccgtagagacc
cagactgttccagacagtaccttttgtatggaggaggttcacttcaatcccatatttcta
gaggaggatgtaaagctttggcgtttatggtcaaagcaggatgtggatcagacacctgcc
atcttttgtcgttacccattcttgatgaatctgcagagcaagataaacgtttttaacatc
aacgccgcactcacaaagaatccccctaacaatcgccaaaggactggcatgtggcctttt
gacatgttcctcgtggcggcgcctgctccgttctttgagctgaggctgaatagagcatca
ctcatcgaagacactttccatcaactgagtgtagcgtatcacagtaccttcaagaggtcc
cttgtggtgtatttcaacgaggatgtgaagctgacagatgtctacaaaagggacttcttt
ctccatttgtttgataagctgttggtacccgagtctgggatgttcatgtacaacgacacc
aatacgctggcctggttccctgcaatgcctagagtggaggagaagcattatttcctgttt
ggggttctgtgtgggatggccctgtacaacaacaacatggtgcacctccccttccccatg
gccttcttcaagaagctggtgaacatcaatccctctttagaggacctgagagagtttagc
cccattgaagcagggagtttgcagtacatcttggattaccctgatgatgatgttgaaaac
atggacatgactttctcagtgatgtggggtgatgtagcggtggaacttgatcccaaagaa
actggaaaactcgtcacaagtgccaacaagaaggagtttgttgacacctatgtgaactac
atcttcaaccagtcagtagaggtggtgtttgaagagttcaggaaaggcttcttcaaggtg
tgtgacaaggacgtggtggagttcttccagccagaggaactgaggggagtgatggtgggg
aaggagaatttcgactgggaaacactgaaacagaacactgtgtatgaaggagagtaccat
gctgggcatcccaacatcgtcacattctgggaggtgtttgaggaactgacagaggatcaa
aagaaagcgttcctgttgttcctgactggctgtgatcgtgtgcccatcctgggtatgaac
cagatcatgatgagggtccaaacccttctcaactcctcccaacagcatttcccagaggcg
ctgacctgtcactctctgttgcagctgcccatctacccctccaaagagacactacagagc
aggcttatagaagctgttggccacaacagaggtttcaagaatgaataa
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