Oncorhynchus kisutch (coho salmon): 109901297
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Entry
109901297 CDS
T09179
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109901297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109901297
03036 Chromosome and associated proteins [BR:
oki03036
]
109901297
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
109901297
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
109901297
RSF complex
109901297
WICH complex
109901297
B-WICH complex
109901297
NORC complex
109901297
BRF complex
109901297
NuRF complex (fruit fly)
109901297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
109901297
NCBI-ProteinID:
XP_031693762
Ensembl:
ENSOKIG00005028393
LinkDB
All DBs
Position
LG12:complement(58021375..58031805)
Genome browser
AA seq
1032 aa
AA seq
DB search
MSETGNGVELREERAVELEETGGGEEKDDVSEASKEESSEAGQDAQDEDPSSSTAPAYEE
KVASDRTNRFEYLLKQTEVFAHFIQPAAQKTPTSPLKMKPGRPRVKKDEKQNLLSVGDNR
HRRTEQEEDEELLSESSKTTNVCTRFDESPSFVKGGTMRDYQVRGLNWLISLYENGINGI
LADEMGLGKTLQTISLLGYMKHYRSIPGPHMVLVPKSTLYNWMNEFKRWVPSLKAVCLIG
DREQRNALIRDVLLPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEKSKLSE
IVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQKLVE
RLHTVLRPFLLRRIKNEVEKSLLPKKEIKMYVGLSKMQREWYTKILMKDIDILNSAGKMD
KMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLAVNSGKMAVLDKLLPKMKAQGSRV
LIFSQMTRMLDILEDYCMWRNFGYCRLDGQTPHEERQISINAYNEEDSPKFIFMLSTRAG
GLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITENTVEERIVERAE
MKLQLDSIVIQQGRLVDPNANKLGKDEMLSIIRHGATHVFASKESDITDDDIDEILERGE
KKTMELKEKMNTMGESSLRNFTMESDNSVYTFEGEDYREKKKVVTNWIEPPKRERKANYA
VDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKTIGYKVPRN
PELPNSAQHQKEEQAKIDEAEGLSEEELEEKENLLSQGFTIWNKRDFNQFIKANEKWGRD
DIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDT
KIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFEKESVYDELRQCIRNSPQF
RFDWFLKSRTAMELQRRCNTLITLIERENMELEEREKAEKKKKGPRSQSSAQKRKGEGTP
DPRGGRRKKLKL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagactggaaacggcgtggagctgcgggaagagcgagcagttgaacttgaagaa
accggaggaggggaggaaaaggatgatgtgtcagaggcaagcaaggaggagtcttctgaa
gccggacaggatgcccaagatgaggacccctcttcatctacagcgccagcctatgaggag
aaagtggcatcagaccggaccaacagatttgagtacctactgaagcagacagaggtgttt
gcccatttcatccaacctgcggcccagaaaacccccacctccccgctcaagatgaagcca
gggcgccctcgtgtcaagaaggacgagaaacagaatctcctctcggtcggagataaccgg
catcgtcgcacagagcaggaagaggatgaagagctgctgagcgaaagcagcaagaccacc
aacgtctgcacccgcttcgacgaatctccctcctttgtaaaagggggtacaatgagagac
taccaggtccgtggtctgaactggctcatctctctgtacgagaacggaatcaacgggatc
cttgctgatgaaatgggtttgggtaagaccctgcaaaccatctctctgctggggtacatg
aagcactacaggagcatccccgggccccacatggtgctggtgcccaagtccaccctgtac
aactggatgaacgagttcaaacgttgggtcccctccctcaaagcagtctgcctcatcgga
gaccgagagcagaggaatgccctgatcagagatgtgctgctgccaggggagtgggatgtg
tgtgtcacctcttacgagatgctcatcatagagaaggctgtgttcaagaagtttaactgg
aggtacctagtcatcgacgaggcccacaggatcaagaacgaaaagtcaaagctgtcagag
atagtgcgtgaattcaagaccaccaaccgtctgctgctaaccggcaccccgctgcagaac
aacctccacgagctctgggccctgctcaacttcctgctgccagacgtcttcaactcctca
gaggactttgactcatggtttgacaccaacaactgcctgggggatcagaagttggtggaa
cgtcttcacactgtactgcgtcctttcctgctgcgtcgtatcaagaatgaggtggagaag
tctctgctgcctaagaaagagatcaagatgtacgtggggctgagtaagatgcagagagaa
tggtacaccaagatcctgatgaaggacatagacatcctgaactctgcagggaagatggac
aagatgcgcctgctcaacgtcttgatgcagctgaggaagtgctgcaaccacccgtacctg
tttgacggggccgagcccggcccgccttacaccaccgacctgcacctggccgtcaacagc
ggcaagatggccgtccttgacaagctgctgcccaagatgaaggctcagggctcccgtgtg
cttatcttcagccagatgaccaggatgctggacatcttggaggactactgcatgtggcgc
aacttcggctactgtcgcctggacggacagacgccccacgaggagagacagatctccatc
aacgcgtacaatgaggaggacagccctaagttcatcttcatgttgagcaccagggccgga
gggctgggtattaacctggccacagctgacgttgtcatcctctacgactcagactggaac
cctcaggtcgacctacaggccatggaccgagctcacaggattggtcaaaagaagcaggtg
cgcgtgttccgtttcatcacggaaaacacagtagaggagaggatcgtggagcgggccgag
atgaagctccaactggactccattgtcatccagcaaggaaggctagtggatcccaacgcc
aacaagctggggaaggacgagatgctgtctatcatccggcacggcgccacgcacgtcttc
gcctccaaggagagcgacatcaccgacgatgacatcgacgagatcctggagcgaggcgag
aagaagaccatggagttgaaggagaagatgaacaccatgggcgagagctccctgaggaac
ttcaccatggagtccgacaacagtgtgtacaccttcgaaggagaggactacagggagaag
aagaaggtggtcaccaactggatcgagccacccaagagagagaggaaggccaactacgca
gtggatgcctacttcagggaggccctgcgtgtcagcgagcccaaagcacccaaggctcct
cgtccacctaagcagcccaatgtgcaggacttccagttcttccccccaaggctgtttgaa
ctgctggagaaagagatcctattctacaggaagactatcggctacaaggttcctcgtaac
ccagaactgcccaactcggctcagcaccagaaggaggagcaggccaagattgacgaggcc
gaaggcctatcagaggaggagctggaggagaaggagaacctcctctcgcagggcttcacc
atctggaacaagcgtgactttaaccagttcatcaaagccaatgagaagtgggggagagac
gacatcgagaacatcgccagagaggtggagggcaaaaccccagaggaagtcattgaatat
tccgctgtgttctgggagcgctgcaacgagctgcaggacattgagaagatcatggctcag
atcgagaggggagaggcccgcatccagaggaggatcagcatcaagaaagcactggacaca
aagattggtcgctacaaggcaccgttccaccagttgaggatctcgtacggcaccaacaag
gggaagaactacacggaggaggaggaccgcttcctcatttgcatgctacacaagttgggc
tttgaaaaggagtcggtctacgacgagctgcgccagtgcatccgcaactcgccccagttt
cgcttcgactggttcctcaagtccaggaccgccatggagctccagaggcgatgcaacacc
ctgatcaccctgattgaacgagagaacatggagctggaggagagagagaaggcagagaag
aagaagaaaggaccacggagtcagtcttctgctcagaagcgtaagggagaagggacccca
gacccgcgaggaggccgcaggaaaaagctaaagctgtga
DBGET
integrated database retrieval system
