Oncorhynchus kisutch (coho salmon): 109901303
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Entry
109901303 CDS
T09179
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
oki03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109901303
09123 Folding, sorting and degradation
03018 RNA degradation
109901303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109901303
03041 Spliceosome [BR:
oki03041
]
109901303
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109901303
mRNA degradation factors
5'-3' decay
Lsm complex
109901303
Spliceosome [BR:
oki03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
109901303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
109901303
NCBI-ProteinID:
XP_020352938
LinkDB
All DBs
Position
LG12:complement(57462180..57465606)
Genome browser
AA seq
80 aa
AA seq
DB search
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIAVEQTEEYVNGQLKNKY
GDAFLRGNNVLYISTQKRKM
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcagaaagcagacccccagtgactttctgaagcagatcattggcagaccagtt
gtggtcaagctcaactctggagtggattacagaggtgtcctagcctgtctggatggctat
atgaacattgcagtggagcagacagaagagtatgtcaatggccagctgaagaacaagtat
ggtgacgccttcctgagaggaaacaatgtgttatacatcagcacccagaagaggaagatg
tga
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integrated database retrieval system
