Oncorhynchus kisutch (coho salmon): 109901307
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Entry
109901307 CDS
T09179
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38-like
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oki01002
]
109901307
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109901307
Enzymes [BR:
oki01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109901307
Peptidases and inhibitors [BR:
oki01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109901307
Ubiquitin system [BR:
oki04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109901307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
Bee_toxin
Motif
Other DBs
NCBI-GeneID:
109901307
NCBI-ProteinID:
XP_031693761
Ensembl:
ENSOKIG00005029462
LinkDB
All DBs
Position
LG12:58031987..58042131
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AA seq
1045 aa
AA seq
DB search
MDKILEALVSSSHSVPVKKAIVKKVVEAAEKEVTAEQCQALYTLTTRLIFLGEDAFQKQV
GFQVLEAYARYHRADFELFFSKDFVLGLLQQGYGPLDRKDPAVVDYIHGCLRLLISCPSV
LDIFSIIQTEILRMVCERPEAALCARLATMLSDFVQCIPREKAAILFCQQLVRTIGYFHC
PASQERELREYVDQVTKVSTLLQNIWKAEPVTLLPSLQEVFAIISSTDPSFDPSIALASL
VQHIPLQMITVLIKSLTTDQNVKDTSMTQALCRMIDWLSWPLAHHVEMWVIALLKGLAAV
QKFTILIDVTLLKIELVFNRLWYPIVRQGALVVLSHMLLSFQHSPEAFHLVVPHIVDLVQ
SLKHDGLPTSKAFLLHFTELVHCMMYQYSGFPDLYDDILEAIKELPGPGEEKIKLVLNQS
AWTSQSNSFASGLLRLPGKSETGKTGLINLGNTCYMNSIIQTLFSATDFRRHVLSLCLND
ATANTLMKKLQLLFTFLSHTQRAAYSPRVFFEASRPPWFNAGSQQDCSEYLRFLLDRLHE
EEKTIQVLMSAKPNVSPGNGPSDNTGGETSAEDARVSPVAPVEGESEGNDERTLIERMFG
GRLSTGIRCMTCNSVSEKEEPFTDLSLAFCPSTTSSPLQTEGPSEEPRGPCQGAVNGGSE
APEIGPSPKPVTASTTSVHFVPGSSEPPLSVPDLVDYFLAPEILDKENAYFCQKCGSLQR
AERGMRVVAAPEYLILTLLRFSYDAKCHVRRKILDNVTIPPLMRLPVHATPPKHSSSSSS
PPSSPLQVDSPESSENLAKKLKPSQREEETGLEGDNGMAGGESEVGVWPAARFLPYVLSS
VVMHSGMSSESGHYYSYGRNLNGADGAQHHLANPLAVGEEPGNGQTEPIVLTCSGATHPK
QEVEVYGGQAAGDWLLFNDSRVTFTSLGSVQNVTNRFPKDTAYVLIYRKQDVTGGQNSTG
GVTANGMRLGSEPPLQKELMDAVTKDNKLFLQEQELNARTRALQAASASCSFRPNGPDDN
EPPGSCGPSGGGGGGGFNTVNRLVF
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggacaagattctagaggcgctggtcagctcctctcactcagtcccagtgaagaaggcc
atcgtgaagaaggtagtcgaagccgcagagaaagaggtcacggcggagcaatgtcaggcc
ctgtacaccctcaccactcgcctcatcttcttgggtgaagacgccttccaaaaacaggtg
ggcttccaggtgctggaggcctatgcccgctaccaccgtgctgattttgagctcttcttc
agcaaagactttgtcctgggcctgttacagcagggctacggccccctggaccgcaaggac
ccggccgtggtcgactacatccatggctgcctgcggctgctgatcagctgcccctcggtg
ctggatatcttctccatcatccagacagaaatcctaaggatggtgtgcgaacgccctgag
gcagccctgtgcgcccgtcttgccaccatgctctcagacttcgtacagtgcatcccccgg
gagaaggcggccattttgttctgccagcagttggtgaggaccattgggtacttccactgt
cctgccagccaggagcgggagctgagggagtacgtagaccaggtgaccaaggtcagcacg
ttgctgcagaacatctggaaggcggagccggtcacactgctgccatctctgcaggaggtg
tttgctataatctcctccactgacccctccttcgacccctccattgccctagccagcctg
gtccagcacatacctctccagatgatcacagttctcatcaagagccttaccaccgaccag
aacgtcaaagacaccagcatgactcaagcactctgcaggatgattgactggttgtcctgg
cctctggcccaccatgtggagatgtgggtcattgccctgctgaaggggctggctgcggtg
cagaagttcaccatcctcatagatgtcaccctgcttaagattgaactggtgttcaaccgt
ctgtggtaccccatcgtgcgacagggggccctagtagttctctcccatatgctgctgagt
ttccaacactctcctgaggccttccacttggtcgtgccacacatagtggacctggttcag
agtctgaagcatgacggcctgcccaccagtaaggctttcctgctgcacttcacagagctc
gtccactgtatgatgtaccagtactctggcttccctgacctctacgacgacatcctggag
gccatcaaagagctacctgggcccggtgaggagaagatcaagctggttctgaaccaaagt
gcctggacgtcccagtccaactcgtttgcctcaggcctgctgaggctgccgggcaagtct
gagacgggcaagactggcctcatcaacctgggaaacacctgctacatgaacagtatcata
cagacactcttctcagccacagatttcaggaggcatgtcttatcgttatgtctgaatgat
gccactgccaacacactgatgaagaaactgcagctcctcttcaccttcctctcacacacc
cagagggcagcgtactcccccagagtcttctttgaggcgtctcggcccccatggttcaat
gcaggatcccagcaggactgttctgagtacctccgcttcctcctggacaggttacacgaa
gaggagaaaactatccaggttctcatgtcagccaagccaaatgtctcccctggcaacgga
ccgagtgacaacaccgggggtgaaacctctgcggaggatgccagagtgtcacccgtggcc
cctgtggagggggagtccgaggggaatgatgagaggacgctgattgagaggatgtttgga
ggcaggctgagcacgggtatccgctgtatgacatgcaacagcgtctcggagaaagaagaa
cctttcactgacctatccctggccttctgtccctccaccacctccagccctcttcagacc
gagggcccctcagaggaaccccggggcccctgccagggggctgtcaacgggggcagcgaa
gctcccgaaataggcccttctcccaaacccgtcacggcctccaccaccagtgtccatttt
gttccagggtccagcgagccaccgctgtctgttcctgacctggtggactacttcctggcg
ccagagatcctggacaaggagaacgcctacttctgccagaagtgtggctcgctgcagcgg
gcggagcgggggatgagggtggtggcggcgcccgagtacctcatcctcacgctgctgagg
ttctcctacgacgccaagtgccacgtgcgccgcaagatcctggacaacgtcaccatcccg
ccactcatgagactgcccgtgcacgccactccacccaaacactcttcgtcctcttcctcg
ccaccatcctctccactccaagtggactcgcccgagagcagcgaaaacctggccaagaaa
ctgaagccgtcgcagagagaggaggagactgggctagagggtgacaacgggatggcagga
ggagaaagtgaggtaggggtgtggccggcggcccggttccttccctacgtcctcagctct
gtagtgatgcattctgggatgtcgtcggagagcggccattactactcctacggccgcaac
ctcaacggggccgacggagcccaacaccacctagccaatcccctcgccgtgggggaggag
cctgggaacgggcagactgagcccatcgtactcacttgctccggggcgactcatcccaaa
caggaagtggaggtgtacggaggccaggctgccggggattggctactgttcaacgacagc
agggtgactttcacttcgttggggtcggttcagaacgtcaccaaccgtttccccaaggac
acggcctacgtgctgatctaccggaaacaggatgttaccggggggcagaacagtaccggg
ggagtgacggccaacggcatgagactgggctctgaacctccgctgcagaaagaactgatg
gacgccgtcaccaaggacaacaagctctttttacaggaacaggaactgaacgcgcggacc
cgagctctccaggcggcctctgcctcctgctcgttcaggcccaacggaccagacgacaac
gaacccccgggcagctgtggtccctcggggggaggaggaggtggggggttcaacactgtc
aacagactggtcttctga
DBGET
integrated database retrieval system
