Oncorhynchus kisutch (coho salmon): 109901377
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Entry
109901377 CDS
T09179
Name
(RefSeq) patched domain-containing protein 1-like
KO
K24682
patched domain-containing protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109901377
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
Other domain-containing proteins
Patched domain-containing proteins
109901377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
109901377
NCBI-ProteinID:
XP_020352988
Ensembl:
ENSOKIG00005028574
UniProt:
A0A8C7MNC4
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All DBs
Position
LG12:26882294..26929104
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AA seq
920 aa
AA seq
DB search
MCFIGRSWASASWIWRRMLRQMIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTV
LSRFKPETDIEILVAPTHSFAKVERSLANSLFPIDQSKNKLYSDLHTPGRYGRLILLAKS
GGNILELADQVLQVHKQVLDLRVNYKGFNYTFAHLCVLSHQDQRCLLDDIITIFEDIRLA
ILSNHTFSKVPVNYPNTTLKDGRVSFIGHQLGGVAFSPNSRDQQVKFARAIQITYYLRNH
GPVVQDVIAEKWENAFCALITRLSTLSEDLHIQSLTSFSLWRDFHQTGVLAKGEVLVSLV
LLLLAATISSSMRDCLRGKPFLGLLGVLTIAIANVTSTGIFFISDGKFNSTLLGIPFFSM
GHGTKGVFELLAGWRRTRESLPFKERVADAFADVMVCYTMTSSLYIITFGMGASPFTNIE
SVKIFCQSMCVAVLVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDRQPTWF
KTMMSDGHDHVTHHEVVPYHNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASFSFMGC
LQISDGSNIVNLLASNTPSVSYATTQQKYFSNYSPVIGFYIYEPIEYWNSTVQEHLTTLS
HGFNKISWMDNYFQYLKVVNVSASTKSDFITILQGSFLRSPEYQHFMEDIILSKTDGDEM
EIIASRMYLVARTTEKTREEVVELLERLRPLSLINNIKFIVFNPTFVYMDRYSSSVVSPI
LTSAFSVLTILILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVHMDSISILCLIYT
LNFAMDHCAPHLYTFVLATEHTRTQCIKISLEEHGAAILQNACCFVIGMLPLVFVPSNLT
YTLFKCSLLTAGCTVLHCFVILPVFLTFFPPSKKRHKKKKRAKRKEREREREMMERERVR
EREEIECIEVRENPDHVTNV
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcataggaagaagctgggcatctgcaagctggatctggaggaggatgctgcgg
caaatgatacacagagggctcaaagcttctttctactggctgggcttatttgttagtagg
catccggtttttttcctcaccgttcccgcagtcttaaccatcattttcggatctaccgtc
ctgagcagattcaagcccgaaacggacatcgagatactggttgccccgacacacagcttt
gctaaagtagagcggagtcttgcgaacagccttttccccatcgaccagtcaaaaaacaag
ctgtattccgacctgcacacccccggcagatatggcagactgattctgctggccaagtct
gggggaaatatactggagctagccgaccaggtcctgcaggttcacaagcaggtgctggat
ttgcgggttaattacaagggattcaattacactttcgctcatctctgtgtcctgagccat
caggatcagcgatgcctcttggatgatataattacgatattcgaagatatccgcttagcc
attctatcgaatcacactttttcaaaggtgcccgtgaactatccaaataccacattaaag
gatggtcgtgtgtccttcatcggccaccagctgggtggagtggccttctcgcccaacagc
cgagaccagcaggtgaagtttgcccgggccatccagatcacctactaccttcgcaaccat
ggccccgtggtgcaggacgtcatcgcagagaagtgggagaacgccttctgcgccctcatc
acacgcctgtccacgctcagcgaggacctgcacatccagtctctcacctccttcagcctg
tggagggacttccaccagacgggagtgctggccaaaggggaggtgctggtcagcctagtg
ctccttctgctggcggccaccatctccagctcaatgagggactgcctgaggggaaagccc
ttcctgggtctgctgggtgtgctcacaatagccatcgccaacgtgacctccactggcatc
ttcttcatctccgacgggaagtttaactccacgctgctggggatcccattcttctccatg
ggtcatggaaccaaaggagtgtttgagctcctggcgggctggcgaagaactcgagaaagc
cttcccttcaaggaacgcgtggcagacgccttcgccgacgtgatggtgtgctataccatg
accagttccctctacatcatcaccttcggcatgggtgccagtcccttcaccaacattgag
tcggtgaagatcttctgccagagcatgtgcgtggccgtcctggtcaactacttctacgtg
ttctccttctacggttcctgcttggtgttcgctggtcagctggagcagaaccgctaccac
agtgtgttctgctgtaagatcccctcagtggagtacctggaccgtcagcccacctggttc
aagaccatgatgagcgacggccatgaccatgtcacgcaccacgaggtcgtgccctaccac
aaccacttcatccagcacttcctgagggagcactacacggagtggatcaccaacacctat
gtcaagcccttcgtggtcatcctctacctgatctacgcctccttctccttcatgggatgt
ttacaaatcagtgatggatccaacatcgtcaacctcctagccagcaacacgcccagtgtg
tcctacgccacgacccagcagaagtacttcagtaactacagccccgtgatcggcttctac
atctatgagcccattgagtactggaactccacggtgcaggagcacctcacaacgctgagc
cacggcttcaacaagatctcctggatggataactactttcagtatctgaaggtggtgaat
gtgagcgcctcgaccaaaagtgatttcatcaccatcctgcagggctccttcctgcgcagc
ccggagtatcagcacttcatggaggacatcattctgtccaagacagatggggatgaaatg
gagataatcgcgtccaggatgtacctggtggcgcggaccacagagaagacacgggaggag
gtggtagaactgctggagaggctccgccccctttcgctcatcaacaacatcaagttcatc
gtcttcaaccccaccttcgtctacatggaccgttacagctcctctgtggtctcacccatc
ctcacatcggccttcagcgtgctcaccatcctcatcctcaccttcttcctggtcatcaac
cctctggggaacttctggttgatcctgaccgtcacctccgtagagctgggggtcctgggc
ctcatgaccctctggaatgtacacatggacagcatctctatcctgtgccttatttatact
ctcaactttgccatggatcactgtgcaccccacctgtacaccttcgtactggccacggag
cacaccaggacccagtgcataaagatctcgttagaggagcacggggcggccattttgcaa
aacgcctgctgtttcgttatcgggatgttgcccttggtgtttgtgccttccaatctgacc
tacacgctgttcaagtgctccctcctcaccgcaggctgcacagtgctgcactgtttcgtc
atcctgcctgtgtttctaacgttttttcccccatcaaaaaaaaggcacaagaagaaaaaa
cgggcaaaacggaaagagcgggagagggagcgggagatgatggagagggagagagtgagg
gagagggaggagatagagtgcattgaagtcagggagaaccctgatcatgtgactaacgtc
tga
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