Oncorhynchus kisutch (coho salmon): 109901423
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Entry
109901423 CDS
T09179
Name
(RefSeq) nuclear receptor ROR-gamma-like isoform X2
KO
K08532
RAR-related orphan receptor alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109901423
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oki03310
]
109901423
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
109901423
Nuclear receptors [BR:
oki03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
109901423
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
TPR_IFT122
Motif
Other DBs
NCBI-GeneID:
109901423
NCBI-ProteinID:
XP_020353008
Ensembl:
ENSOKIG00005012285
UniProt:
A0A8C7FI18
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All DBs
Position
LG2:1681167..1707484
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AA seq
500 aa
AA seq
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MEFEEHDSPEHITTEEPIKRGDTVSKKTHLTQIEVIPCKICGDKSSGVHYGVITCEGCKG
FFRRSQLPSVSYSCSRQSNCPIDRASRNRCQSCRLQKCVTQGMSRDAVKFGRMSKRQRES
LHAEVERHRQQQQQQHLQAEAQPALPCPSKACRFRTPHLLQAPAPAYSFPGEPELPPCPT
DVLPYLVCSPGESQAPGLAYQGSCVSPGSGHSDERGFDSRQPSPDQTIGMGIRSYDPEDP
YCPYPSSHSLLHIERLCDSIVRSHRDTSQFRLEELQALRWKLFSREEIHAYQSKSVDEMW
QLCALRLTEAVQYVVEFAKSIPGFRGLGQNDQITLLKTGSMEVVLVRMSRCFNTENSTVF
FDGKFGSTELFKSLGCGDLMVAVFDFAHRMCALRLTEQQMALFSSLVLINPDCPCLEDRG
RVHRMRRDLEVCLSHMLRRDNQESLQDKLYQKVSVLRSLCSLHVEKLHWFSQRYPLTVHS
VFPPLYKELFTSDLPSVDSL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgaggagcacgattcacccgaacacatcactacagaagaaccaatcaaaaga
ggagacactgtgtccaagaagactcatttgactcagattgaggtgattccctgtaagatc
tgtggtgataaatcatcaggagttcactatggagtcatcacctgcgagggctgcaagggt
tttttccggcgtagccagctgccgtccgtgtcctactcctgttccagacagagtaactgt
cctatagacagagccagccgcaaccgctgccagagctgccgactgcagaagtgtgtgacc
cagggcatgagccgggatgcggtgaagtttggtcggatgtcgaaacgtcagcgggagtct
ctgcatgccgaggtggagagacaccgtcagcagcagcagcagcagcatctccaggcagag
gcccagcccgccctgccctgccccagcaaggcatgccgtttccggacaccccacctgctc
caggccccggctccggcctactccttccctggagagccagagctgccaccctgcccgaca
gatgtgctcccctacctggtgtgctccccaggcgagtcccaggctccaggtctggcctac
cagggctcctgtgtgtctcctggtagtgggcactcagacgaaagagggttcgactcccgt
cagccgtctcctgaccagacgatagggatgggaattagatcgtatgacccagaagacccc
tactgcccttacccctcctcccactccctgctacacatagagaggctgtgtgacagtatc
gtgcggtcccatagggacaccagtcagttcagactagaggaactacaggctctgagatgg
aagttgttcagcagagaggagatccatgcctaccagagcaagtcagtagatgagatgtgg
cagctctgtgccctgaggctgactgaagcggtacagtacgtggtggagtttgccaaaagc
atcccagggttccgtgggcttggacagaacgaccagatcaccctgctcaagactggatcg
atggaggtggttctggttagaatgagcaggtgttttaacacagagaacagcaccgtcttc
ttcgatgggaagtttggtagcactgaacttttcaagtctctgggctgtggtgatctgatg
gtggcggtgtttgacttcgctcacagaatgtgtgccctgagactgactgagcagcagatg
gctctcttcagctcactggtgctcattaaccctgattgcccctgtcttgaggatagaggc
agagtacatagaatgagaagagacttggaggtatgcctcagccacatgctacgcagagac
aaccaggagagccttcaggacaagctctaccagaaggtgtcagtgttgcggtctctgtgc
agtcttcatgtggagaagctgcactggttcagccagcgctacccgctcaccgtccactct
gtcttccctcctctatacaaggagctgttcacctctgacctgccttctgtggactccctg
tga
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