Oncorhynchus kisutch (coho salmon): 109901608
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Entry
109901608 CDS
T09179
Symbol
gmds
Name
(RefSeq) GDP-mannose 4,6 dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00051
Fructose and mannose metabolism
oki00541
Biosynthesis of various nucleotide sugars
oki01100
Metabolic pathways
oki01250
Biosynthesis of nucleotide sugars
Module
oki_M01016
GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
109901608 (gmds)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
109901608 (gmds)
Enzymes [BR:
oki01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
109901608 (gmds)
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Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NmrA
Polysacc_synt_2
Motif
Other DBs
NCBI-GeneID:
109901608
NCBI-ProteinID:
XP_031641610
Ensembl:
ENSOKIG00005029460
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All DBs
Position
LG13:complement(18879505..19116802)
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AA seq
377 aa
AA seq
DB search
MAQCTEPSTSIGANGELKKPRKVAVITGITGQDGSYLAEFLLEKGYEVHGILRRSSSFNT
GRIEHLYQNPQTHTEGKDGTTGGHMKLHYGDLTDSTCLVKIINQVKPTEIYNLGAQSHVK
ISFELAEYTANVDGVGTLRLLDAIKTCGLTNSVKFYQASTSELYGKVQEIPQKETTPFYP
RSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIHLGQL
ESFSLGNLDSKRDWGHAKDYVEAMWLMLQQEEPEDLVIATGEVHSVREFVEKSFKHVGKT
IVWEGKDENEVGRCQETGVIHVKVDSKYYRPTEVEYLQGDSTKALTKLGWKAKITFQELV
KEMVDADIHLMKNNPNA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggcccaatgcacggaaccgtctaccagcatcggggcgaacggagagctgaaaaagccg
aggaaggttgctgttatcacgggcatcactggacaggatggctcctacctggctgagttc
ctgctggagaagggctatgaggttcatggtatactgcgaagatccagctctttcaacact
ggtcgtattgagcacctgtaccagaacccccagacacacactgagggaaaggatggaact
acaggtggccacatgaagctacactatggggacctgacagacagcacttgcctggtgaag
atcatcaaccaggtcaaacctacagaaatctacaacctgggagcccagagccacgtcaag
atctcctttgagctggctgagtacacagctaatgtggacggtgttggtaccctgcgtctg
ctggacgctataaagacgtgtggtctgaccaacagtgtcaagttctaccaggcctctact
agtgaactctatgggaaggtacaggagatccctcaaaaggagaccacgccgttctacccc
cgctcaccttacggtgctgctaagttgtatgcttattggattgtggtgaacttcagggag
gcctataacctgtttgctgtcaacgggatcctcttcaaccacgagagcccaagaagagga
gcgaacttcgtgacgcgtaagatcagtcgttctgtggcgaagattcacctgggccagctg
gagagctttagtctgggtaacctggactccaagagagactggggccacgccaaggactac
gtagaggctatgtggctgatgcttcagcaggaggagccagaggaccttgtcatagcgacg
ggggaggtccatagtgtcagggagtttgtggagaagtccttcaaacatgtgggcaagacc
attgtgtgggaggggaaagatgagaacgaggttggtcgttgccaggagacaggggtgatt
catgtgaaggtggactccaagtactaccgtcctactgaagtggaatacctgcaaggtgat
agcaccaaggcactgacaaagttaggctggaaagcaaagatcacttttcaggaactggtg
aaagagatggttgatgctgacatccatctcatgaagaataaccctaacgcataa
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