Oncorhynchus kisutch (coho salmon): 109901623
Help
Entry
109901623 CDS
T09179
Symbol
prrx1
Name
(RefSeq) paired mesoderm homeobox protein 1 isoform X1
KO
K09329
paired mesoderm homeobox protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109901623 (prrx1)
Transcription factors [BR:
oki03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
109901623 (prrx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
DUF6210
Motif
Other DBs
NCBI-GeneID:
109901623
NCBI-ProteinID:
XP_020353215
Ensembl:
ENSOKIG00005040901
LinkDB
All DBs
Position
LG13:11118068..11130168
Genome browser
AA seq
245 aa
AA seq
DB search
MTSSYAHVRDRQATISNRLESPITSNLENLQAKKNFSVSHLLDLEEAREMVGTQADESVG
EAGRNMLESPGLTSGSDTTQQENEQLNAEEKKKRKQRRNRTTFNSSQLQALERVFERTHY
PDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLASKNASLLKSYSGDVTAVEQP
IVPRPAPRPNDYLSWGSASPYSAMATYPPTCSNPNTSQGMNMANSIANLRLKAKEYSLNH
VPTVN
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgacttctagctatgcacatgtaagggacaggcaagcaacgatatcaaatcgcttggag
agtccgattacatcgaatctggaaaaccttcaagccaaaaagaacttctccgtgagccac
ctgttggatctggaggaggccagggaaatggttgggacacaggcggacgagagtgtcggt
gaggcagggaggaatatgctggagtccccggggctgaccagtgggagcgacaccacccag
caggagaatgagcagctgaacgcagaggagaagaagaagaggaaacagaggaggaacaga
actacgttcaacagcagccagctgcaggctctggagagggtgtttgagaggacacactac
cccgacgccttcgtcagagaggacctggcacgcagggtcaacctcacagaggcacgggtg
caggtgtggtttcagaatagaagagcaaagtttcgtcggaacgagcgagccatgttggcc
agcaagaacgcctcgctccttaagtcctactctggggacgtcacggccgtcgagcagccc
atcgtaccccgtccggccccccgcccaaatgactacctatcctggggcagtgcctctcct
tacagtgccatggcaacctacccccccacatgctccaaccccaatacatcccagggaatg
aacatggctaacagcatcgccaacctgcggctcaaagccaaggagtacagcttgaaccac
gtgcccacggtcaactga
DBGET
integrated database retrieval system
