Oncorhynchus kisutch (coho salmon): 109901708
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Entry
109901708 CDS
T09179
Name
(RefSeq) integrin alpha-8-like isoform X1
KO
K06584
integrin alpha 8
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04510
Focal adhesion
oki04512
ECM-receptor interaction
oki04514
Cell adhesion molecules
oki04810
Regulation of actin cytoskeleton
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109901708
04514 Cell adhesion molecules
109901708
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109901708
09142 Cell motility
04820 Cytoskeleton in muscle cells
109901708
04810 Regulation of actin cytoskeleton
109901708
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109901708
Cell adhesion molecules [BR:
oki04515
]
Integrins
Integrin alpha subunits
109901708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
109901708
NCBI-ProteinID:
XP_031642753
Ensembl:
ENSOKIG00005023068
LinkDB
All DBs
Position
LG13:complement(63541889..63590256)
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AA seq
1056 aa
AA seq
DB search
MCAYRMYAFGGMLCRVVSVLWPVLSVVSGFNLHAERPAVYRGPEGSYFGYSVDFYRPTPE
SSTLSVLVGAPKANTSQPGIIEGGAVYYCPYPLNPDPTKQPYSCTQIPFDNTNNRMIKVN
GTREPLEFKSHQWFGASVRTHKGKVVACAPLYHWRAVKVNGEKDPVGTCYVAVQNFSAYA
EYSPCRTNDPDPEGQGFCQAGFSVDFTKEGTLVVGGPGSFYWQGQVMTAGVAEILNGYSL
KAVLRRVPGEKHTHAAADTHDDSYLGYSVAVGEFTGDSEQELIAGVPRGAQNFGYVAVIN
STNLTFIMNFTGEQMASYFGYSVAVTDLNGDGYDDVLVGAPLYMERERESKPKEVGRVYL
YLQHSPLTFSEPLLLTGTHTFGRFGTAIAPLGDLNQDGYNDVAVGCPFGGEDRSGLVLIY
NGQRDLTARGLTLSQELYGAWASSSGLSGYGFTLRGDRDLDNNHYPDLIVGAFGKGEVSV
YRARPVVSVEAEMILTPRILNPDDRSCFLTESDTMVTCLRVDICAKVSGVGIPDSVVLNA
ELQLDWLKGVRGGVKRVYFLDSHQPQHTGVLTLGHSRPHSCLNYTVYLRGEDEFRDKLTP
ISLALNYSLAPPSNLDLPPVLNRYSSTFLQEQAYILLDCGEDNECIPDLQLSASIDRTEL
VVGDDNLVMLTINAVNKGEGAYETELHTLLPPEADYIGVERRIEALSRLNCEYRMVNDSR
LVVCDLGNPMVAGTEVSVGLRFAVQRLDDAGPHIDFDLQIHSSNKDSSKSNPVSLSLSIS
ARAQLDLRGVCHPSQVVLPFPHWEPKENPVKEDDVGPQVTHIYELHNSGPSSIREAELQV
GWPSRFRDEHLLYALEVLTDGPISCRSNTSLNPLGLQTSSVQDTPELLGFLRNSSSPHRY
RRATNAAQPYSSKTLNCSNIICLRVLCVVGRLDRGQSAVVKIRSRLWAHTFLQRRNDPYL
LNSTVSFRVTALPYRLQPSSLPQHTTSMGTLVLWGTPDVAFAIPLWVIILAILLGLLVLA
MLTLAMWKCGFFDRARPPADDVSDREQLTSDQLADA
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcctataggatgtatgcatttggtgggatgttgtgtcgcgtggtgtcggtgcta
tggcctgtcctttcggttgtctcgggcttcaacctgcatgcggagcgccctgcggtgtac
cgaggaccagaggggagctactttggttactccgtggacttctaccgaccgacccccgaa
agcagcacgttgagtgtgttggtgggagcgcccaaggccaacacatcccagccaggcatc
atagagggaggagctgtctactactgtccctatcccctaaaccctgaccccaccaagcaa
ccctacagctgcacacagatacccttcgacaacaccaataacaggatgattaaggttaat
ggcaccagggagcctctggagttcaagtctcaccagtggtttggagcctcagttagaact
cacaaaggcaaagtggtggcctgtgctcctctctaccactggcgtgctgtgaaagtgaac
ggtgagaaggacccggtaggaacctgctatgttgccgtgcagaacttcagcgcctacgca
gaatactcaccctgtaggaccaatgatccagacccggagggacagggtttctgccaggcc
gggttcagtgtggacttcaccaaggaggggacactggtggtgggtggacctggcagcttc
tactggcaaggtcaggtgatgactgcaggcgtagcagagatattgaatggttactctctg
aaagccgtgctcaggagagtccctggagagaaacacacacacgctgcagctgatacccat
gacgacagctacctaggttactctgtggcagtgggggaattcacaggagactcagagcaa
gagctgatagctggtgttccgagaggggcacagaactttggatatgtagctgtgattaac
tccactaatctgacattcatcatgaacttcacaggagagcagatggcttcctactttggc
tattctgtggccgttactgacctcaacggagatgggtatgatgatgtactggtaggagcc
cctctctacatggagagagagagggagagtaaacccaaggaggtgggccgtgtctacctg
tacctccagcactccccgctcaccttctccgagccccttctcctgacgggaacacacacc
tttggacgctttggcactgccatcgccccgctaggagacctcaaccaggacggatacaac
gacgtggcggtgggttgtccgtttggtggggaggaccggagtggcctggtgttgatctac
aatggccagagagacctgacggcccgcggcctaaccctcagccaggagctctatggagcc
tgggcctccagtagtggcctctccggctacggcttcacactgaggggggacagagacctg
gacaacaaccattaccctgatctgatagtgggagcatttggtaaaggggaggtgtcggtg
tacagggctcgtcctgtagtgtcagtggaggcagagatgatcctgactcctagaatcctg
aaccctgatgaccgatcctgcttcctgacagaatctgataccatggtgacctgtctaagg
gtagatatttgtgcaaaggtgagcggtgtggggatcccagactctgtagtcctgaatgca
gagctgcaactggattggcttaaaggtgtgaggggcggagttaagagagtttatttcctg
gattcccatcagccccagcacacaggggtcctaacgcttggccacagccgtcctcactcc
tgcctgaactatactgtctacctacgaggggaggatgagtttagggataaattgactccc
atctcattggctctgaactacagtttagcccctccttccaacctggacctcccccctgtc
ctcaaccgctacagcagtaccttcctgcaggaacaggcatatattctgctggactgtggg
gaagacaacgagtgtattccagacctccagctatctgcaagcatagaccgtacagagctg
gtggtcggggatgacaacctggtcatgttgaccataaacgcggttaacaaaggagagggg
gcatatgagactgagttacacacactcctaccccctgaggctgattacataggagtggaa
cgcaggatagaggctctatccaggttgaactgtgagtacaggatggtgaatgactccaga
ctggtggtgtgtgacctggggaaccctatggttgccggaacagaagtatctgtaggttta
aggtttgctgtccaaaggctggatgatgccggtcctcacattgactttgacctacagatc
cacagttcaaacaaagacagctccaagagcaacccagtcagtctgtctctctccatctct
gccagagctcagctagacctgaggggggtgtgtcatccctctcaggtggttcttccgttt
ccgcattgggagcccaaagagaatccggtcaaagaggatgacgtaggaccccaggtcaca
cacatctacgagctccataactcaggtcccagtagtatccgggaggcggagctccaggtg
ggctggccctctcgtttccgtgacgaacacctgctctacgctctggaggttctaacagac
ggaccaatcagctgtcggagcaacaccagcctcaaccccctgggcctacagacatcctct
gtccaggacactccagaacttttgggctttctgaggaacagtagctctcctcaccgctac
agacgagccaccaatgctgcccagccctacagcagcaagaccctgaactgcagtaacatc
atttgtctaagagttctgtgtgtggtcgggcggttggaccgtggtcagagcgctgtagtc
aagatccgctcccgactctgggctcacaccttcctccagagacgtaacgacccatacctc
ctcaactctaccgtgtccttcagagtgacggccctgccctaccgcctccaaccctcctcc
ttaccccaacacaccacttcaatgggtacactggtgctgtggggaactcctgatgtggcg
tttgctattcctctgtgggtcatcatcctagccatcctactgggactgctggtcctggcc
atgctaacactggccatgtggaagtgtggtttctttgaccgggctcggccgccagcggat
gacgtgtcagaccgtgagcagctgacctctgaccaattagcagacgcctaa
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