KEGG   Oncorhynchus kisutch (coho salmon): 109901708
Entry
109901708         CDS       T09179                                 
Name
(RefSeq) integrin alpha-8-like isoform X1
  KO
K06584  integrin alpha 8
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04510  Focal adhesion
oki04512  ECM-receptor interaction
oki04514  Cell adhesion molecules
oki04810  Regulation of actin cytoskeleton
oki04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oki00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109901708
   04514 Cell adhesion molecules
    109901708
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109901708
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109901708
   04810 Regulation of actin cytoskeleton
    109901708
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oki04515]
    109901708
Cell adhesion molecules [BR:oki04515]
 Integrins
  Integrin alpha subunits
   109901708
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha
Other DBs
NCBI-GeneID: 109901708
NCBI-ProteinID: XP_031642753
Ensembl: ENSOKIG00005023068
LinkDB
Position
LG13:complement(63541889..63590256)
AA seq 1056 aa
MCAYRMYAFGGMLCRVVSVLWPVLSVVSGFNLHAERPAVYRGPEGSYFGYSVDFYRPTPE
SSTLSVLVGAPKANTSQPGIIEGGAVYYCPYPLNPDPTKQPYSCTQIPFDNTNNRMIKVN
GTREPLEFKSHQWFGASVRTHKGKVVACAPLYHWRAVKVNGEKDPVGTCYVAVQNFSAYA
EYSPCRTNDPDPEGQGFCQAGFSVDFTKEGTLVVGGPGSFYWQGQVMTAGVAEILNGYSL
KAVLRRVPGEKHTHAAADTHDDSYLGYSVAVGEFTGDSEQELIAGVPRGAQNFGYVAVIN
STNLTFIMNFTGEQMASYFGYSVAVTDLNGDGYDDVLVGAPLYMERERESKPKEVGRVYL
YLQHSPLTFSEPLLLTGTHTFGRFGTAIAPLGDLNQDGYNDVAVGCPFGGEDRSGLVLIY
NGQRDLTARGLTLSQELYGAWASSSGLSGYGFTLRGDRDLDNNHYPDLIVGAFGKGEVSV
YRARPVVSVEAEMILTPRILNPDDRSCFLTESDTMVTCLRVDICAKVSGVGIPDSVVLNA
ELQLDWLKGVRGGVKRVYFLDSHQPQHTGVLTLGHSRPHSCLNYTVYLRGEDEFRDKLTP
ISLALNYSLAPPSNLDLPPVLNRYSSTFLQEQAYILLDCGEDNECIPDLQLSASIDRTEL
VVGDDNLVMLTINAVNKGEGAYETELHTLLPPEADYIGVERRIEALSRLNCEYRMVNDSR
LVVCDLGNPMVAGTEVSVGLRFAVQRLDDAGPHIDFDLQIHSSNKDSSKSNPVSLSLSIS
ARAQLDLRGVCHPSQVVLPFPHWEPKENPVKEDDVGPQVTHIYELHNSGPSSIREAELQV
GWPSRFRDEHLLYALEVLTDGPISCRSNTSLNPLGLQTSSVQDTPELLGFLRNSSSPHRY
RRATNAAQPYSSKTLNCSNIICLRVLCVVGRLDRGQSAVVKIRSRLWAHTFLQRRNDPYL
LNSTVSFRVTALPYRLQPSSLPQHTTSMGTLVLWGTPDVAFAIPLWVIILAILLGLLVLA
MLTLAMWKCGFFDRARPPADDVSDREQLTSDQLADA
NT seq 3171 nt   +upstreamnt  +downstreamnt
atgtgtgcctataggatgtatgcatttggtgggatgttgtgtcgcgtggtgtcggtgcta
tggcctgtcctttcggttgtctcgggcttcaacctgcatgcggagcgccctgcggtgtac
cgaggaccagaggggagctactttggttactccgtggacttctaccgaccgacccccgaa
agcagcacgttgagtgtgttggtgggagcgcccaaggccaacacatcccagccaggcatc
atagagggaggagctgtctactactgtccctatcccctaaaccctgaccccaccaagcaa
ccctacagctgcacacagatacccttcgacaacaccaataacaggatgattaaggttaat
ggcaccagggagcctctggagttcaagtctcaccagtggtttggagcctcagttagaact
cacaaaggcaaagtggtggcctgtgctcctctctaccactggcgtgctgtgaaagtgaac
ggtgagaaggacccggtaggaacctgctatgttgccgtgcagaacttcagcgcctacgca
gaatactcaccctgtaggaccaatgatccagacccggagggacagggtttctgccaggcc
gggttcagtgtggacttcaccaaggaggggacactggtggtgggtggacctggcagcttc
tactggcaaggtcaggtgatgactgcaggcgtagcagagatattgaatggttactctctg
aaagccgtgctcaggagagtccctggagagaaacacacacacgctgcagctgatacccat
gacgacagctacctaggttactctgtggcagtgggggaattcacaggagactcagagcaa
gagctgatagctggtgttccgagaggggcacagaactttggatatgtagctgtgattaac
tccactaatctgacattcatcatgaacttcacaggagagcagatggcttcctactttggc
tattctgtggccgttactgacctcaacggagatgggtatgatgatgtactggtaggagcc
cctctctacatggagagagagagggagagtaaacccaaggaggtgggccgtgtctacctg
tacctccagcactccccgctcaccttctccgagccccttctcctgacgggaacacacacc
tttggacgctttggcactgccatcgccccgctaggagacctcaaccaggacggatacaac
gacgtggcggtgggttgtccgtttggtggggaggaccggagtggcctggtgttgatctac
aatggccagagagacctgacggcccgcggcctaaccctcagccaggagctctatggagcc
tgggcctccagtagtggcctctccggctacggcttcacactgaggggggacagagacctg
gacaacaaccattaccctgatctgatagtgggagcatttggtaaaggggaggtgtcggtg
tacagggctcgtcctgtagtgtcagtggaggcagagatgatcctgactcctagaatcctg
aaccctgatgaccgatcctgcttcctgacagaatctgataccatggtgacctgtctaagg
gtagatatttgtgcaaaggtgagcggtgtggggatcccagactctgtagtcctgaatgca
gagctgcaactggattggcttaaaggtgtgaggggcggagttaagagagtttatttcctg
gattcccatcagccccagcacacaggggtcctaacgcttggccacagccgtcctcactcc
tgcctgaactatactgtctacctacgaggggaggatgagtttagggataaattgactccc
atctcattggctctgaactacagtttagcccctccttccaacctggacctcccccctgtc
ctcaaccgctacagcagtaccttcctgcaggaacaggcatatattctgctggactgtggg
gaagacaacgagtgtattccagacctccagctatctgcaagcatagaccgtacagagctg
gtggtcggggatgacaacctggtcatgttgaccataaacgcggttaacaaaggagagggg
gcatatgagactgagttacacacactcctaccccctgaggctgattacataggagtggaa
cgcaggatagaggctctatccaggttgaactgtgagtacaggatggtgaatgactccaga
ctggtggtgtgtgacctggggaaccctatggttgccggaacagaagtatctgtaggttta
aggtttgctgtccaaaggctggatgatgccggtcctcacattgactttgacctacagatc
cacagttcaaacaaagacagctccaagagcaacccagtcagtctgtctctctccatctct
gccagagctcagctagacctgaggggggtgtgtcatccctctcaggtggttcttccgttt
ccgcattgggagcccaaagagaatccggtcaaagaggatgacgtaggaccccaggtcaca
cacatctacgagctccataactcaggtcccagtagtatccgggaggcggagctccaggtg
ggctggccctctcgtttccgtgacgaacacctgctctacgctctggaggttctaacagac
ggaccaatcagctgtcggagcaacaccagcctcaaccccctgggcctacagacatcctct
gtccaggacactccagaacttttgggctttctgaggaacagtagctctcctcaccgctac
agacgagccaccaatgctgcccagccctacagcagcaagaccctgaactgcagtaacatc
atttgtctaagagttctgtgtgtggtcgggcggttggaccgtggtcagagcgctgtagtc
aagatccgctcccgactctgggctcacaccttcctccagagacgtaacgacccatacctc
ctcaactctaccgtgtccttcagagtgacggccctgccctaccgcctccaaccctcctcc
ttaccccaacacaccacttcaatgggtacactggtgctgtggggaactcctgatgtggcg
tttgctattcctctgtgggtcatcatcctagccatcctactgggactgctggtcctggcc
atgctaacactggccatgtggaagtgtggtttctttgaccgggctcggccgccagcggat
gacgtgtcagaccgtgagcagctgacctctgaccaattagcagacgcctaa

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