Oncorhynchus kisutch (coho salmon): 109901716
Help
Entry
109901716 CDS
T09179
Name
(RefSeq) neural-cadherin
KO
K27892
neural-cadherin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109901716
Cell adhesion molecules [BR:
oki04515
]
Cadherins
Cadherin related
109901716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
CADH_Y-type_LIR
Cadherin_CELSR2_9th
EGF
Fibulin_C
Cadherin_pro
hEGF
He_PIG
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
109901716
NCBI-ProteinID:
XP_031642701
Ensembl:
ENSOKIG00005033006
LinkDB
All DBs
Position
LG13:complement(62291763..62425816)
Genome browser
AA seq
2904 aa
AA seq
DB search
MTGATNGTVALKTFLLVALVSFSTGNSKLPVYYGQIVENSPAGTVVDWVALPVGNNCHVS
ELDIALEGKDASDFRLVYHQGEQHLILKSTETLDREFIAVYDLKVVLSGCLNSAVVIKIE
VLDSNDNIPRFIEGNERVKVDELTPIGSELVRLFAKDSDGGMNGRVTYYASPKCQHVYVV
PQTGQVMLVSSLIGVMNLTVRIYAQDNGDVALISKPVTLHLDVQRPAVSKVRRPRAVSEE
RSYTVTVSEDVKVGDMIFTVPDQKFEKKWFEIISEADSPVQIERDSGRLYLAHRLKSPAE
VMVKIQNLRGDEWYLCRLSLSVPTLADLQWSMFPQPYLGAVGPDAAPGSVVYRLTARQRD
GTIGNAHFLLLDGGEDSFEVDRSSGEVRTTGRPLTPSREYMLKVQVVDTQGRKGPPATVA
ILAGFRPPQFTNASYTLTVPENTPVGQAVAMVGAVSFQRKTLSYMLLVNPGNLFSVNQES
GALSLTRTVDFESGHTLHTLQVRASEPDTGLSGVAEVVVHITDENDCTPEFLHSIYSRDN
IPEATTPGTSLLQVLARDCDTGLNSELSYFIQSPDFAISSRGVVSPSQRLDYERPNHMYE
FVVVAVDNGTPPRTGTASIRFRMANTNDEAPIFSQAVYKTFLSEDAGPDTLVAIVHANDP
DGDGVSYAITGGNEDSNFQLDNQKGIIKLRRSPPPILRGPQYILNITATDDNAADGPYPL
SNSAQVIVGINDINNNKPVFEECHNYSVNTGVLENQPPGTFVLRVHALDADMGVNGEVKY
GIMHRDGTSSGFVINPDTGVISTTVSFDRERQREYSLSVTATDLAQEPLIGICQITILIA
DQNDNDPKFENSRYQYFLREDTPVGTSFLRAAAHDDDQGSNAAIAYSLSRQQPAYLHINP
STGWVYVNHPISQTSRISQQIVATDGGNRSSSVELTVIITNVHNHPPQWGQLEYWVTVPE
NTVRDAKIVTIKATSPLGDPRVTYNLEEGQVPETNMPVRFYIKPNRADGSASILVAEPLD
YETTRFFTLRVRVQNVAAVPLASFTTVYVNVTDVNDNVPFFLSSTYEATVPEGAEIGTSV
AQVSATDLDSGLHGMINYVILKDESGDSQYFSINSYTGVIHTRASFDREQKGSYLIEVQS
QDSSESARPGQQGQPNTDTAYVRILVTDVNDNAPAFAQSVYEVSVEEDKEVGFVLITVTA
NDEDEGANAKLRYQITSGNTMGTFDVEPEVGTIFVAQHLDYEMEQRYELRLVASDGKWEN
ESLVVVQVVNRNDEAPVFGQTEYHAAVTEELTELPVFVLEVSATDPDQEADQSALRYSLH
GQGAGSEFTIDECTGRIYAQRRLDREERPAWRFLVLATDEGGAGLTGFADVLLEVHDIND
NAPVFPCPAPDSSGCFVGHVPENSPADTSVMEIRATDLDDPKAGKNAILTYRIVQNVRNE
INLNLFSINPSTGTISTVLRSLDREAEDRYLVVVEARDGGGLTGTGTATIMVSDVNDHPP
VFTQRVYNAQVAEDLEVNSEVLAVSASDGDQGENAVVTFSIVGGDEDRKFFVETDKANRR
GVVRLKKKMDFEKPHERTFNLTVKAEDADFFSLAYCLVQVEDSNDHAPVFFPQFYEAPAM
SEDVSVGTIVAQVTAADLDSGLNGRFSYSIAKESDPYGQFLVDQSGWVVVADSLDREMVS
QHRLMVLATDTGSPPLTGTAIVMVTVLDVNDNGPEFEVPYKPIVWENMAAPQAVRINDTS
LLLHAADRDSSPNGGPFSIRLLMLTSDATSFNLTDLRNGSAALTTLRTFDRERQKEYRLP
ILMIDSGSPPMSSTSTLTVVIGDRNDHPHSPGHTDFFVYSYHGVLPTTVLGQVQSPDLDD
WSEKVYRFQGKPPSGLFSLNHNSGQLIIREGAPVPVGSYSLEVRVSDKTWPDVTSTAEVV
VMELDEEAVQNAGSLRLSNITVEQFFSSAPGQESSFSRLGRLLSELLQTDQDNVHVFSVA
NGNRQGEREVNVWFAAHGSPYYKAEKLHGNVMAHKAKLEAALGVSISQVGIDECPYTDCS
QSGGCSSDVTFSLTPTALSSGNTSLVSVSASSEARCGCRARESLHQACSSYPRNPCLNGG
TCQDSELGYRCKCPPMFDGPECQQTKHTFHGQGYAWFPPIRPCFQSHISLEFITESANGL
LLYNGPLGPAQAGEQEDYIALELRNGVPTLSISHGSGTLALQLPARSTVTDRRWHRLDIV
SDGKAVQLILDQCSGAVVNEVEGLVVEVLETDQSGCKASGETPGNLRFLNVNQPLQLGGV
KVTSTHRRYKAFTGCLRNLVVDSKVYDLGIPGESLDSSPGCGLTDGVCVTASGPSCGVHG
TCLGEWGSFSCDCHPGYSGHKCDKALPEWSFARDSMLRYQLRGGGSPRRTHIQLLLRTRS
SSGTLLSMTSHGANEYIILEIVDSHLSVRANLGDGAHSLRLASQRVDTGQWVLASLHRHD
NLFTLRLEQGGGSREARAWMGNRREIVVHPSSVLLGNGPTPGQSADFQGCLRDVRLNDHS
LFLDGQSTEFSTVLERRGVTSGCHSDACSAKPCRSPLYCVDLWRKHQCRCPGGQVTVTDE
TSGHHRCVPSPCGPSACRNRGTCHALTPDSWQCRCPEGFRGQRCEVGQMKAHRMAALSPG
SILVISMCLLVFFAVLVAVTVWNQKGSRSKFQKRGVYHLPAEHQSWEDIRENILNYNEEG
GGEQDQNAYDITELKRPLCSSLSQSSSCTTAPLIKSSQGSQEEVHPAGSACSSGTPYLHI
PHHHHRHHHHHASNASYTNDSNDAHAISVGHCPMDFKSYVARIIWEADNDSQEFPPDSYH
VWSIEGAGSPVGSLSSLGSAISHDKAEEEEGAAFSSDRLSHWGGKFEALSEMYERPALAL
TYREALSYSQSQRSHSQDNLPHPF
NT seq
8715 nt
NT seq
+upstream
nt +downstream
nt
atgacgggagctacaaacggaacggtagccctgaagacatttttgcttgtcgcattggtt
tcattttcaacagggaattcaaagctgcctgtgtattatggacaaattgtggagaactcg
cccgctggaacagtggtggattgggtagctttaccggttggaaacaactgtcatgtttcg
gaactggacattgctttggaagggaaggacgcatcagattttcgtttggtttaccatcaa
ggagaacagcatcttattttgaaatccacagaaactttggacagagagtttatagcagtg
tacgatttgaaggttgtgctttctggttgtttgaatagtgccgtggtgattaaaatagag
gtgcttgattcaaacgacaacataccccggttcatcgagggaaacgaaagggtaaaagtt
gatgaattgacccctatcggttccgaattggtccgtctttttgcaaaggattccgacggt
ggaatgaatggccgggtaacttattacgcatctccaaaatgccaacatgtgtacgtagtt
ccccaaaccggacaggtaatgctggtcagttctctcattggtgtcatgaacctaacagtc
cgtatttacgctcaagataatggagatgtcgcattgataagtaagccggtgacacttcac
cttgatgtgcagagacctgctgtctcgaaggttaggaggccccgagcggtctccgaggaa
cggtcctacacagtgaccgtctcagaggatgtcaaagtcggtgacatgatattcacggtg
cctgaccagaagtttgagaaaaagtggttcgagataatatcagaggcggactccccggtt
cagatcgagagggactcgggtcgtctgtatctcgcgcacagactgaagtcccccgcagag
gtcatggtcaaaatccaaaacctcagaggtgatgagtggtacctctgcaggctgagcctg
agtgtgcccaccctggcagacctgcagtggagcatgttcccccagccctacctgggcgca
gtgggacctgacgccgcaccaggctctgtggtctaccgcctcaccgcccgccaacgtgac
ggcacaataggaaacgcccacttcctgctactggatggcggcgaggattcgtttgaggtg
gaccgcagctctggagaggtcaggaccacaggccgacccctgacccccagcagggagtac
atgctgaaggtgcaggtggtcgacacacagggcaggaagggtccccctgcaacagtggct
attctggcagggttccgccccccacagttcaccaacgcctcctacaccctgactgtccca
gagaacacgcccgtgggccaagctgtggcgatggtgggggccgtctccttccagaggaag
actctctcctacatgctgctggtgaaccctggcaacctgttcagtgtcaaccaggagagt
ggagctctcagcctcacccggacagtggactttgagagtggacacacactccacacgctg
caagtcagggcctccgagccagacacaggcctcagcggtgtggcagaggtggtggttcac
atcacagatgagaatgactgcaccccagaattcctccactccatttacagccgggataac
attcccgaagccaccacgcctggaacgtcactgctacaagttctagcgagggactgtgac
acagggctcaactcagagctctcctacttcatccagagtccagactttgccatctcttcc
aggggtgtggtgagccccagccaacggttggactacgagcggcccaatcacatgtacgag
tttgtggtggttgccgtggacaacgggactccaccccgcaccgggaccgcctccatccgg
ttcagaatggccaataccaacgacgaggctcctatcttctctcaagctgtctataagacg
ttcttgtcggaggacgccggtcctgacactctggtggccattgtccacgccaatgaccct
gatggagacggggtctcttacgccatcactggcggcaacgaggacagtaactttcagctg
gacaaccagaagggcatcatcaaactgcggcggagcccccctcctatcctgcgtggcccc
cagtacatcctcaacattaccgccactgatgacaacgcggcagacggaccctatcccctc
agtaactccgcccaggtcatagtgggcatcaacgacatcaacaacaacaagcctgtcttt
gaagagtgccataactacagtgtcaacaccggtgtcctggagaaccagccccctgggaca
tttgtcctccgcgttcacgccctcgacgcagacatgggggtcaacggagaggtcaaatac
gggatcatgcaccgagacgggacatcatccggcttcgtcatcaaccctgacactggtgtg
attagcaccacagtgagttttgaccgcgagcgccagagggagtactccctgtctgtcacg
gcgacagacctggcccaggagcccctcatcggcatctgccagatcaccatcctcatcgca
gaccagaacgacaacgaccccaagtttgagaacagccgctaccagtacttcctgcgcgag
gacacgccggtggggactagcttcctgcgagcagcagcacacgatgatgaccaggggagt
aacgccgctatcgcctactctctgtcccgtcagcagccggcctacctgcacatcaacccc
agcacaggctgggtgtacgtcaaccaccccatctcacagacgtcgaggatcagccagcag
atcgtggccacagacgggggcaacaggagcagctctgtggagctgaccgtcatcatcacc
aacgtacacaaccatccgccccagtgggggcagctagagtactgggtcaccgtgcccgag
aacacagttcgcgacgccaagatagtgacgatcaaggccacttcaccgctgggtgaccct
agagtgacctataaccttgaggagggtcaggtcccagagaccaacatgcctgtccgcttc
tacatcaaacccaacagggctgatggctctgcatccatactggtggctgagcctctggac
tatgagaccacgcgcttcttcacactaagggtcagagtgcagaacgtagctgctgttcca
ctggcctcttttactaccgtctacgtcaatgttacagatgtaaacgacaacgttcccttc
ttcctgtcctccacctacgaggctaccgttccagagggggcagagatcggaacatcggtg
gcccaggtttctgctacggacctcgactcaggcctccatggaatgataaactatgtgatc
ttgaaggatgagagtggagactctcagtacttcagtattaactcctacactggggtcata
cacacccgggcctcgtttgaccgtgagcagaaaggttcctacctcatagaggtccagtct
caggacagctccgagtcagccaggcctggacagcagggccagcccaacactgacacggcc
tacgtacggatccttgtgacggacgtcaacgacaacgctccggctttcgcccaatcggtg
tacgaggtgagcgtggaggaagacaaggaggtgggcttcgtccttatcaccgtgacggcc
aatgatgaagatgaaggtgccaacgccaagctccgctaccagatcacctctggcaacacc
atgggcacctttgacgtggagccagaggtgggcaccatctttgtggcccagcatttagac
tacgagatggagcaacgctacgagctgagactggtggcctccgacgggaaatgggagaat
gagagcctagtggtggtccaggtggtgaaccgcaacgatgaggcgcccgtctttggccag
acagagtaccacgccgctgtcacagaggagctgaccgagctgcccgtctttgtgctggag
gtttcagccaccgacccagaccaggaggcagaccagagcgccctgcgctactcactccac
ggccagggagctggcagtgagttcaccatcgatgagtgtacgggccgcatctacgcccaa
cgccgtctggaccgtgaggagcgcccggcctggcgtttcctggttctggccaccgatgag
ggaggggcgggactcactggctttgctgacgtccttttggaagttcatgacatcaacgac
aacgcaccagtcttcccatgcccagcgccagactcttcaggctgctttgttggccacgtg
cctgagaactctcccgccgacacctcagtgatggagataagggccacggatttagatgac
cccaaggccgggaagaacgccatactgacctaccgcatcgtacaaaacgttcgcaacgag
atcaacctcaatctgttctccatcaacccttcaactggaaccatcagtacagttctacgg
tctctggaccgtgaggcggaggaccgctatctggttgtggttgaggccagggatggtggg
ggcttgaccgggactggaacagctactatcatggtatcagatgtgaatgaccatccacca
gtcttcacccagagggtctacaatgcccaggtggcggaggacctagaggtgaacagcgag
gttctggcggtttccgccagcgatggcgaccagggtgagaacgcagtggtcactttcagc
atcgtcggaggcgacgaggacaggaagttctttgtggagacggacaaggcgaaccggcgt
ggtgtggtgcggctgaagaagaagatggactttgaaaagccccacgagagaacgttcaac
ttgactgtgaaggcagaagacgcagacttcttcagcctggcatactgcctggttcaggtg
gaggattccaacgaccacgcacccgtcttcttcccacagttctatgaggctcctgccatg
tctgaggacgtgtctgttggcaccattgtggctcaagtcaccgctgccgatctggactca
ggactaaatggccgcttctcctacagcattgccaaagagtctgacccctacgggcagttc
ctggtggaccagtcaggctgggtggtagtggctgactctctggaccgggaaatggtatcc
cagcacagactcatggtcctggccaccgacacgggcagcccgccactcaccggcaccgcc
atcgttatggttaccgtactggacgtcaatgacaacgggccagagtttgaggtgccctac
aagcccattgtgtgggaaaacatggctgccccccaggcggtgagaataaacgatacatcc
ctgcttctccacgcagccgaccgcgactcctcacccaatggtggaccgttttccatccgt
ctcctgatgttaacctccgatgctaccagcttcaacctgactgacctgcgcaacggtagc
gctgcactgactaccctgcgaacctttgaccgtgaacgccagaaggagtaccgccttccc
attctcatgattgacagcgggtctcccccaatgagctcaaccagcacattgacggttgtc
atcggcgacaggaatgaccacccccactctccgggccacaccgacttcttcgtgtacagc
taccatggtgttctccccacaacagtgcttggacaggttcaatcccctgaccttgacgac
tggagcgaaaaggtttacagattccaaggcaaaccccccagcgggttgttcagtctgaac
cacaactcaggccagttgattatcagagagggggcccctgtaccggtgggttcctacagc
ctcgaggtgcgtgtctccgacaagacctggcccgacgtgacctccactgcggaggtcgtt
gtcatggagctggacgaggaggcagtccagaacgctggctctttgcgcctgtccaacatc
acagtggaacagttcttcagtagtgcaccgggtcaggagagttctttctcccgcctgggt
cgtctcctctccgagcttctccagaccgaccaggacaacgtccacgtcttctctgtcgcc
aatggcaaccgccagggtgagcgcgaggtcaacgtgtggttcgccgcccacggctcgccg
tactacaaggccgagaaactccacggcaatgtgatggcgcataaagctaagttggaagca
gcgctgggtgtgtctatctcccaggtgggtatagacgagtgtccctacacagactgcagt
cagtcgggcggctgcagcagcgacgtcaccttcagcctcacccccaccgccctcagctcc
ggaaacacctccctggtgtctgtctccgcctcctctgaggcacgctgcggctgcagggcc
agagagagcctgcaccaggcctgctcctcttacccccgcaacccctgcctcaacggaggc
acctgtcaggacagcgagctgggatacaggtgcaagtgtccacccatgtttgacgggcct
gagtgccagcagaccaagcacaccttccacggccagggttacgcctggttccctcccatc
aggccttgctttcaaagccacatctcattggagttcataaccgagtcagccaatgggctg
ctgctctacaacggccctctaggccccgcccaggccggagagcaggaggactacattgct
ctggaattgaggaatggcgttccgaccctcagcatcagccatggatcgggaacactggcg
ttgcagctcccagcgagatccaccgtcacggaccgccgatggcaccgcctggacatcgtc
agtgacggaaaggcagttcaactgatcctagaccagtgttcgggggcagtggtgaatgag
gtggagggtctagtggtggaggtgctggagacagatcagtctggctgcaaggcttctggc
gagacccctggcaacctgaggttcctgaatgtgaaccagcctctccagctgggtggggtg
aaggtgacctccacacacagacgctacaaagctttcactggctgcctcaggaacctggtg
gtcgatagcaaggtgtatgacctgggaattccgggggagagcttggatagttccccaggc
tgtggcctgacagacggggtgtgtgtgacagcaagtggaccctcctgtggcgtccacggg
acctgcctgggcgagtggggctccttcagctgtgactgtcaccccgggtacagtgggcac
aagtgtgacaaagctctaccagagtggtccttcgccagggacagtatgctacgctaccag
ctgagggggggaggtagcccccgtcgtacacacatccagctcctgctccgcacgcgctcc
tcctctggcaccctgctctccatgacgtcccacggtgccaacgagtacatcatcctggag
atcgtagacagccacctgtcggtgcgtgccaacctgggtgacggtgcccactcccttcgc
ctggccagccagcgggtcgacacgggccagtgggtcctcgccagcttgcatcgtcatgac
aacctcttcacgctgcgcctggagcagggtggtggctcgcgggaggccagggcttggatg
gggaacaggcgggagattgtggtgcacccctccagtgtgctgctggggaatggacccacc
ccgggacaatctgctgacttccagggctgcctgcgggatgtgaggctgaacgaccactcc
ctctttctggatggtcagagtaccgagttcagcacggtgttggagcggaggggggtgact
tcaggttgtcactcagacgcctgcagtgccaagccctgccgcagccccctctactgtgtg
gacctgtggaggaaacaccagtgcaggtgtccaggtggccaggtgacggtgacagacgag
acatcaggccaccaccgctgtgtgccctccccctgtggaccctcggcctgccgtaacagg
ggcacctgccacgccctgacccctgacagctggcagtgccgttgccccgaggggttcaga
ggtcagcgttgtgaggtgggccagatgaaagcccaccgtatggccgccctcagcccgggc
tccatcctggtcatcagcatgtgtctgctcgtcttcttcgctgtgctggtagctgtgaca
gtgtggaaccagaagggcagtcgtagtaagttccagaagaggggcgtgtaccacctccct
gcagaacaccagagctgggaggacatcagagagaacatcctcaactacaatgaggaggga
ggaggagagcaggaccagaatgcctatgacatcacagagctgaagaggcccctgtgttcc
agcctgtcccagtcctcatcctgcacaaccgcccctctcatcaagtcctcacagggctcc
caggaggaggtgcaccccgctggctcagcctgcagctcagggaccccctatctccacatc
ccccaccaccaccaccgccatcatcatcaccacgctagcaatgctagctatactaatgat
agtaatgatgctcatgctatctccgtgggccactgccccatggacttcaagagctacgtg
gcgcgcatcatctgggaggccgacaacgacagtcaggagttcccgccggacagctatcat
gtctggagcatcgagggcgctgggtctccggtcggtagcctcagctcgctgggttctgct
atctcccacgataaagcagaggaagaggagggagcagccttcagctctgatcggctatcc
cactgggggggcaagtttgaggctctaagtgaaatgtacgagcgaccggcgctggcgctg
acatacagggaagctttgagttacagccagagtcagaggagccatagtcaggacaacctg
ccacaccctttttag
DBGET
integrated database retrieval system