KEGG   Oncorhynchus kisutch (coho salmon): 109901752
Entry
109901752         CDS       T09179                                 
Name
(RefSeq) DNA repair protein XRCC1-like
  KO
K10803  DNA-repair protein XRCC1
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    109901752
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oki03400]
    109901752
DNA repair and recombination proteins [BR:oki03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     109901752
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT SLC12
Other DBs
NCBI-GeneID: 109901752
NCBI-ProteinID: XP_031642489
Ensembl: ENSOKIG00005016878
UniProt: A0A8C7G9D0
LinkDB
Position
LG13:57671781..57701874
AA seq 635 aa
MPEIKLKHVVSCSTEDNTHKADNLLSSDTYRKWKAARPGEKQTSVIIQFEKEEQVYSIDI
GNEGSAFIEVLVGHSTSVKDQDYEVLLVTSSFMSPMESRNGTNINRVRFFGPNQLVKAHA
QEKWDRVKIVCSQPYNKNIAYGVAFVKFHSPPDKSDPPTTTTPKLTKLGQFRVKDESPSA
CPSLQPGSLFFNRESTSKASPALKVSPQTEKLSYAAAALQSGSGSGHSSAPPSSNSPPPQ
AAVKRKFEFTKERQTALASPPSKKPSPMGSPERGTTTPKPKAKPSTASTPSPIAAKVSPA
QKTPDTKKKESLSKPQAKPRAKPSKAQSSSSEATVPLNKIMEGVVFVLSGFQNPFRGDLR
DKALAMGAKYRSDWNPDATHLICAFSNTPKYSQVKSAGGVIVRKEWVLDCHKRKQKISFK
RYLMHGAASSSEGSDVEEDEESEEEKERRTPQKRREEERQPTPRKTPIKKEEEDLYGGST
DADEPEDESGMDTEDELKRVESASRQKEGEKERKGVKEEDPFGGSTDENTDAEAEEDKPI
PKLPDFLTGKRFFLYGKFPNNDRRLLLRYIIAFNGEVEDYMSEKVQFVVTGEGWHDSFED
ALMENGNLSFVKPTWIFAINDRQKMLPYQPYTVVP
NT seq 1908 nt   +upstreamnt  +downstreamnt
atgccggagataaaactcaagcatgtagtgtcttgcagcaccgaagacaatactcacaag
gctgacaacctgctgagctcagacacatacagaaaatggaaagcagcaaggccaggggag
aaacaaacctcagtgattatacagtttgagaaagaagagcaggtgtacagcatagacata
ggaaatgaagggtctgcttttatcgaggtgctggtgggacactcaacctctgtcaaagac
caggactatgaggttttgctggtcacgtcctccttcatgtcccccatggagagccgtaac
ggcaccaacatcaaccgcgtgcgcttctttggccctaaccagctggtgaaggctcacgcc
caggagaaatgggaccgcgtgaagattgtgtgtagccagccgtacaacaagaacatagca
tacggagtggccttcgtgaagttccattcaccaccagacaaaagtgatccaccaaccaca
acaacaccgaagttgaccaagctgggccagttccgggtgaaggatgagtccccctctgct
tgccccagtctacagccaggcagcctcttcttcaacagagagagcacctccaaagccagc
ccagcgctcaaggtttcaccacagactgagaagctcagctatgcagctgccgccctgcag
tctggatcagggtctggccactcctcagccccaccgtcctccaactctcccccaccacag
gcagcagtgaagaggaagtttgagttcactaaagagcgccagactgccctcgcttcgccc
ccctcaaagaaacccagccctatgggctctcctgaacggggcactaccacccccaaaccc
aaggccaaacccagcacagccagtactcccagccccatcgctgccaaagtctcccctgcc
cagaaaaccccagacaccaagaagaaggagagcctgtccaaaccacaagccaagcccaga
gccaaaccctccaaagcccagtccagctcctccgaggccaccgttcccctcaacaagatc
atggagggggtggtgtttgtgctgagtggcttccagaacccctttcggggggacctgagg
gacaaggccctggccatgggggccaagtaccgctctgactggaaccctgacgccacacac
ctcatctgtgccttctccaacacccccaagtacagccaggtgaagtcagcagggggcgtc
atcgtccggaaggagtgggtgctggactgtcacaagaggaagcagaagatctccttcaaa
cggtacctgatgcacggagcagcgtccagctcggaggggagcgacgtagaggaggatgaa
gagagtgaggaggaaaaagagagaaggactccacaaaagaggagagaagaagaaaggcaa
cccactcccagaaagacccccatcaagaaagaggaggaagatctgtatggtggctccaca
gacgcagatgaaccagaagatgagtctggcatggacacggaggacgagctaaagagggtg
gagagcgcgagtcggcagaaggaaggagagaaggagagaaaaggagtgaaggaggaggac
ccttttggggggtcgactgacgagaacactgacgctgaggccgaggaggacaagcccatc
cctaagttaccagatttcctaactggaaaacgattcttcctctatggcaagttccccaac
aatgacaggcgcctactcctgcggtacatcatcgccttcaacggggaggtggaggactac
atgagtgaaaaggtccagtttgtcgtcaccggcgagggatggcacgactcctttgaagac
gcactgatggagaatggtaatttaagctttgtcaaacccacatggatttttgccatcaac
gatcgacagaagatgctgccatatcagccctacactgttgtcccttga

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