Oncorhynchus kisutch (coho salmon): 109901885
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Entry
109901885 CDS
T09179
Name
(RefSeq) rho guanine nucleotide exchange factor 2-like isoform X1
KO
K12791
Rho guanine nucleotide exchange factor 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109901885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109901885
Membrane trafficking [BR:
oki04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109901885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
C1_2
SOS1_NGEF_PH
Prok-RING_1
Poty_PP
CM_2
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
109901885
NCBI-ProteinID:
XP_031644628
Ensembl:
ENSOKIG00005017369
LinkDB
All DBs
Position
LG2:16256249..16310555
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AA seq
1285 aa
AA seq
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MNCSESMNKGLYITSVHSLAPFLFLSLSPFLSLTLPPPVCQMIATPPHSPRLPGSPSYLG
GHCVPCPAPPPSSPCPSPPSSPSSGGVTLRRTTPSSCLTHTLDHLRRHSWQPGVMMYGCP
PQYQQRSVSLEGFDPEEMERVLLGALEGSSRGGRDPRRAPITSFGQELGSLLSLTEEEAG
CQTPVFSPLEEQSSQLQGFSASAPSLCASPSLRQLPKANLHPPTHTNTDTHSPTPHTHPY
THSQNHQHHRHQPCHRSYSNSNSISQCHYQESSLGSVFGGSTQSVDTELGELWGQEERQR
LGEERERRREERRTEGLRGAPPGEERGEKTGSPLGRTFSFLRKMAGQRKNKEKERMKERE
KEAREREARYSNGHLFTSLTVSATTLCSACNKSITAKEALSCPTCNVTIHNRCRDTLANC
VKMKQKQQKLALVRNNSALQNVALRTKTPMMKERPSSAIYPSDSLRQSLLGSRRVRSGLS
LSKSVSTQNLAGNLNDDSPLGLRRILSQSTDSLNFRNRAMSMESLNDEGEVYYAAMLEEL
EREGKDFEADSWSRAVDPSYLQTHRKDVIKRQDVIYELIQTEFHHVRTLRIMEGVFRQGM
LDEVLLEPGVAHAVFPCLEQLMALHTHFLSQLMTRRTHSLAPGSSTNFTINQLGDILTEQ
FSGQCADEMRKAYAEFCSRHPKAVKLYKELLARDKRFQHFIRRVSRGPLLRRHGIQECIL
LVTQRITKYPVLIQRILDNTKGSEEEAQSLAQSLSLIRDLLSSVDQQVAELERTQRLQEI
RARLDPRAQAEVRGGGVFRGGELLRRTLLHEGTLLWKTQGSRLKDVQVLLMTDILVFMQE
KDQKYFFPCIDKPAVLSLKNLIVRDIANQERGMFLISDSTPPEMYELHGASRDDRNNWMR
LIQQTVSSCPSREDFPLIETEDKALLRRLRADIQQKDREVLELLQERVTLFSDLAEVTGG
GQEVTPTPTNSRNIFRADTPYAPQAEYLLTDAISEVDRLSELLLGSNIELPKSNGTNDDQ
NHKGAPVSNGDSISVNGTHEMKGSPASKDRNGNQLQDRPLNEEVCQRLVNLSAHLHSLQA
AVIHQDSVLELRLHEGTGPASSGSSTPTPTPPNSFPRLCRSMSRDTGLDAGMVAAMGEMA
MLQKQHDLLQEEVVRLRPLEARLRDSERARAQLEQQIRDNKGKRGRRGRRGSRGSNEDIV
VDVTALEQAPAKRRGSGDGEPSPVAPLACQEPVDQLDGVQEGSEEEESEEEADVVKVSPR
SDSPRDLQDIPEESECGPEAQESKG
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgaattgcagtgaaagtatgaataaaggcctttacataacatctgtccattctctcgca
cccttcctctttctctccctctcacccttcctctccctcacccttcctccccctgtctgc
cagatgatcgccacacctcctcactcccctcgtctcccaggctccccgtcatatctggga
ggacactgcgtcccctgtccggcccccccaccctcctccccttgcccctcccctccctcc
tctccctcctctggaggggtcacactacgtcggaccaccccctcctcctgtctcacacac
actctggaccacctccgcaggcacagctggcagcctggagtcatgatgtatggctgcccc
ccacagtaccagcaacgcagtgtgagtctggagggttttgacccagaagagatggagcgg
gtgctccttggagccctggagggatccagcagaggggggcgggaccctcgccgagccccc
atcacctcttttggccaagagctgggctccctgctgtcactcacggaggaggaggcgggc
tgccagaccccggtcttctccccattggaggagcagtcgtctcagctgcagggcttcagt
gcctccgctccctccctgtgtgccagtcccagtctgcgccagctacccaaagccaacctc
caccctccaacccacacaaacactgatacacactctccgacacctcacacacacccctac
acacactcacaaaaccaccagcatcatcgtcatcagccttgccatcgctcctactcaaac
tccaattccatctcccaatgccactaccaagagtcttccctgggctctgtatttgggggt
tccacacagagtgtggatacagagcttggtgagctgtgggggcaagaagagaggcagcgg
ctgggcgaagagagagagaggcggagggaggagagaaggacggagggactgaggggtgct
ccccccggggaggagaggggggagaagacgggaagccctttgggacgcaccttcagcttc
ctgcgcaagatggctggccaacgcaagaacaaagagaaggagcggatgaaggagagggag
aaggaggcgcgggagcgggaggcgcgctatagcaacggccacctcttcacttccctcact
gtgtctgccaccaccctctgttccgcctgcaacaagagcatcaccgctaaagaggccctc
agctgccccacctgcaatgtcaccatccacaaccgctgtcgagacacactggccaactgt
gtcaagatgaaacaaaagcaacagaagctagcactggtgaggaacaactccgcgctgcag
aacgtagctctaaggaccaaaacccctatgatgaaggagcggcccagctcagccatctac
ccgtccgacagtctccgtcagtccctgctgggttcccgccgtgtccgctctggcctctcc
ctctccaagagtgtctccacacaaaaccttgcagggaatctgaatgacgactcacctttg
ggcctgcggaggatcctgtctcagtccacagactccctgaacttcagaaacagagccatg
tcaatggagtccctcaacgacgagggggaggtgtactatgctgccatgttggaggagctg
gagagggaggggaaggactttgaggctgactcatggagccgggccgtagacccctcctac
ctgcagacgcaccgcaaagacgtcatcaagagacaggacgtcatctatgagctgatccag
acagagttccaccacgtgaggaccctgcggatcatggagggggtgttccggcagggcatg
ctggacgaggtgctgctggagccgggcgtggcgcacgctgtcttcccctgtctggagcag
ctgatggcactacacacgcacttcctttcccagcttatgacacgacgcacacacagcctg
gcccccgggagcagtaccaactttactatcaaccaactgggggatatactgactgaacag
ttctcaggtcagtgtgcagatgagatgaggaaagcctatgctgagttttgcagccgccac
cccaaagctgtgaaactgtacaaggaactgctggccagagacaagaggtttcagcacttc
atacggagggtaagccgggggcccctgctgcgtcgccatggcatccaggagtgcatcctg
ctggtgactcaacgcatcaccaaataccctgtcctcatccagcgcatcctggacaacacc
aagggcagtgaagaggaagcccagtccctagcccagtccctgtctctgatccgggacttg
ttgagctctgtggaccagcaggtggcagagttggagcggacccagaggctccaggagatc
agggccagattggacccccgggcccaggcggaggtcaggggaggaggggtgttcagggga
ggggagctgctccgcaggactctcctccacgagggcactctgctgtggaagacgcaagga
tccagactcaaagacgtgcaggtcctgctgatgacagacatcctggtgttcatgcaggag
aaagaccagaagtatttcttcccatgcatagacaagcctgcagtgttgtctctgaagaac
ctgatcgtgagggacatagccaatcaggagcgagggatgttcctgatcagtgactccacc
cccccagagatgtacgagctgcatggcgcctcacgagacgacaggaacaactggatgaga
ctcatacagcagacagtcagcagctgtccgtccagagaggactttcccctgatagagaca
gaggacaaggccttactgcgccgactcagagctgacatccagcagaaggacagagaggtg
ctggagctcctccaggagagagtgactctgttctctgacctggctgaggtcaccggtggg
ggtcaggaagtcacacccacccccaccaactctaggaacatcttccgggccgacaccccc
tacgcaccccaggcggaatacctactcaccgacgccatctcagaggttgacaggctgagt
gagttgctgctgggctccaacatagagcttcccaagtccaacggtaccaatgatgaccag
aaccacaaaggggcgccagtgagcaatggagattcgatctccgtcaacgggactcatgaa
atgaaaggaagtccagcgtccaaggacagaaatggtaaccagctacaggacagaccccta
aatgaggaggtgtgtcagaggcttgtgaacctcagtgctcatctccactctctacaggcc
gctgtcattcaccaagactctgtcctcgagctccgcctccacgagggcactggccccgcc
tcctcaggttcctccactcccacccccactcctccaaactccttccccaggctgtgccgt
tccatgtcacgtgacacaggtctggatgcgggcatggtggcagccatgggggagatggcc
atgctccagaagcagcatgatctgctgcaggaggaggtggtgaggctgcgccccctggag
gccaggctgagggacagcgagagggccagggctcagctggagcagcagatcagggacaat
aagggcaagaggggcaggaggggaaggagaggcagcagaggcagcaacgaagacattgtg
gtggatgttacagccttagagcaggctcctgctaaaagaagaggaagtggtgatggcgag
cccagccctgtcgcgccattggcctgtcaggaaccagtggaccaattggacggcgtacag
gaaggcagtgaggaggaggagtcggaggaagaggcggatgtagtgaaggtttcaccacgc
tctgacagtccaagagatctccaggatatcccggaggagagcgagtgcggaccggaagct
caggaatccaaaggctga
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integrated database retrieval system
