Oncorhynchus kisutch (coho salmon): 109901942
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Entry
109901942 CDS
T09179
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109901942
Membrane trafficking [BR:
oki04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
109901942
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
ig
LRR_14
Ig_2
V-set
LRRNT
LRR_Zer-1
Ig_VEGFR-1-like_5th
Ig_5
Motif
Other DBs
NCBI-GeneID:
109901942
NCBI-ProteinID:
XP_020353553
Ensembl:
ENSOKIG00005022329
UniProt:
A0A8C7H8Y7
LinkDB
All DBs
Position
LG2:18367756..18389767
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AA seq
615 aa
AA seq
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MFVESVIRWGAWSILLQCGLLGVSAGDFPWPCPARCVCQLETLEVNCSDKQLTSVSEGFA
SGTQRINLSRNKLKTLGRRQFLGMTQLEDLDISDNVIAMIEVEAFQGLQNLKTLCIRSNR
LKIISVGVFSGLPSLRFLDLSENEILVFLDFTFRELVSLHQLEAGENDLVFISQRAFTGL
QNLQELNLDRSNLTSIPTEALSQLQSLTRLRMIRLTISALPNNAFRRLHRLRSLVISHWP
LLDKLASNSLIGLNLTSLVISSCNLSAVPYQALRHLVYLGYLDLSYNPITAIQGNLLGDL
LRLQELHLAGGNLLRIEPGAFRGLAYFRLLNVTSNQLSTLEDSAFHSVGNLQVLRLDGNP
LACDCRLLWVVRRRQRLNFDGRQPTCSTPDMVREREFRDFSEKELPRLFTCRQARIVDRR
SQEVRVEEGTTVLFSCKADGDPMPSFTWLSAQRIPLSTTGRIRVLSNGTLEVRYAQVQDS
GTYQCTAGNAAGNDSLYVSLYVKGFPRNRTMPFFTDEGWIESSNAPTANSSAQVANQYPF
DAKTLIIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDYVPRTSMGVGGGGGGG
GGGGGDAGKFTMKLI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggagtctgttatcagatggggggcatggagcatcttgctccagtgtggatta
ttgggcgtgtcagcaggggacttcccctggccttgccctgccaggtgtgtgtgtcagctt
gagactttagaagttaactgctctgacaaacagctgacttctgtgtctgagggcttcgct
agtggcacccagcgcatcaacttatctcgtaacaagctgaagacgctgggtcgtcgccag
ttcttgggcatgacccagctagaggatctggacattagtgacaatgtcattgccatgatt
gaagtggaggctttccagggcctgcagaacctcaagaccctgtgcattaggagcaatcgc
ctcaagatcatctctgtgggggtcttctccggactgcccagcctgcgcttcctggacctg
agtgagaacgagatcctggtctttctggactttactttccgtgagttggtgagccttcac
cagctggaggctggggagaatgacctggtgttcatctcccagcgggcctttaccggcctg
cagaacctgcaggagctcaatctggaccgcagcaacctgacctccatccccaccgaggca
ctatcccagctccagagcctgactcggctgcgcatgatccgcctcaccatctcagcgctg
cccaacaatgccttccgccgcctgcatcggctgcgtagcctcgtcatctcccactggccc
ttgctggacaagctggccagcaacagcctgattggcctcaacctcacctcgctggtcatc
agcagctgcaatctcagtgctgtcccataccaggcactgcgccacctggtctacctgggc
tacctggacctgtcctacaaccccatcacagccatccagggtaacctgctgggggacctg
ttgcggctgcaggaactgcacctggctgggggcaacctgctccgcatcgagccaggggcc
ttcagggggctggcatacttccgtctgctcaacgtgacatccaaccagctcagcacactg
gaggacagtgccttccactcggtggggaatctgcaggtcctgcggctggatgggaacccc
ctggcctgtgactgccgactactctgggtggtccgccggcgacagcgcctgaactttgac
ggtcgccaacccacctgctccaccccggacatggtgcgagagcgggaattccgggacttc
tcagagaaagagctcccgagactgttcacctgccggcaggcccgcattgtagaccgcagg
tcccaggaggtcagggtggaggagggcactacggtgctcttctcctgcaaggcagatggt
gacccaatgccctcctttacctggttgtcagcccagcggattccgctctccactacgggg
cgcatcagggtgttgtccaatgggactctagaagtacgctatgcccaggttcaggacagc
ggcacataccagtgcacggcgggcaacgcagctggcaacgacagcctgtacgtcagcctc
tatgtgaagggtttcccacgtaaccgcactatgccatttttcaccgacgaaggctggata
gagtcctcaaacgcccctactgccaactcctctgcccaggtggccaaccagtacccgttt
gatgccaagacactgatcatcgccaccaccatgggcttcctgtccttcctcagctcagtg
gctatctgctttgtcttcatgttcttctggagccagagcaaggggcaaatcaaacacaca
gccaccatcgactatgtgccccgtacctcaatgggggtaggaggaggaggaggaggaggg
ggagggggtggaggggatgctggcaagtttaccatgaagcttatctaa
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